Escherichia coli K-12 MG1655 complete genome - 0..4639221 4289 proteins Location Strand Length PID Gene Synonym Code COG Product 190..255 + 21 1786182 thrL b0001 - - thr operon leader peptide 337..2799 + 820 1786183 thrA b0002 E COG0527 aspartokinase I, homoserine dehydrogenase I 2801..3733 + 310 1786184 thrB b0003 E COG0083 homoserine kinase 3734..5020 + 428 1786185 thrC b0004 E COG0498 threonine synthase 5234..5530 + 98 1786186 b0005 b0005 - - orf, hypothetical protein 5683..6459 - 258 1786187 yaaA b0006 S COG3022 orf, hypothetical protein 6529..7959 - 476 1786188 yaaJ b0007 E COG1115 inner membrane transport protein 8238..9191 + 317 1786189 talB b0008 G COG0176 transaldolase B 9306..9893 + 195 1786190 mog b0009 H COG0521 required for the efficient incorporation of molybdate into molybdoproteins 9928..10494 - 188 1786191 yaaH b0010 R COG1584 orf, hypothetical protein 10643..11356 - 237 1786193 b0011 b0011 - - putative oxidoreductase 10725..11315 + 196 1786194 htgA b0012 - - positive regulator for sigma 32 heat shock promoters 11382..11786 - 134 1786195 yaaI b0013 - - orf, hypothetical protein 12163..14079 + 638 1786196 dnaK b0014 O COG0443 chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins 14168..15298 + 376 1786197 dnaJ b0015 O COG0484 chaperone with DnaK; heat shock protein 15445..16557 + 370 1786198 yi81_1 b0016 L COG3385 IS186 hypothetical protein 15869..16177 - 102 1786199 yi82_1 b0017 - - IS186 and IS421 hypothetical protein 16751..16960 - 69 1786200 gef b0018 - - Gef protein interferes with membrane function when in excess 17489..18655 + 388 1786201 nhaA b0019 P COG3004 Na+/H antiporter, pH dependent 18715..19620 + 301 1786202 nhaR b0020 K COG0583 transcriptional activator of nhaA 19811..20314 - 167 1786203 insB_1 b0021 L COG1662 IS1 protein InsB 20233..20508 - 91 1786204 insA_1 b0022 - - IS1 protein InsA 20815..21078 - 87 1786206 rpsT b0023 J COG0268 30S ribosomal subunit protein S20 21181..21399 + 72 1786207 b0024 b0024 - - orf, hypothetical protein 21407..22348 + 313 1786208 ribF b0025 H COG0196 putative regulator 22391..25207 + 938 2367096 ileS b0026 J COG0060 isoleucine tRNA synthetase 25207..25701 + 164 1786210 lspA b0027 N COG0597 prolipoprotein signal peptidase (SPase II) 25826..26275 + 149 1786211 slpA b0028 O COG1047 probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase) 26277..27227 + 316 1786212 lytB b0029 I COG0761 control of stringent response; involved in penicillin tolerance 27293..28207 + 304 1786213 yaaF b0030 F COG1957 orf, hypothetical protein 28374..29195 + 273 1786214 dapB b0031 E COG0289 dihydrodipicolinate reductase 29651..30799 + 382 1786215 carA b0032 E COG0505 carbamoyl-phosphate synthetase, glutamine (small) subunit 30817..34038 + 1073 1786216 carB b0033 E COG0458 carbamoyl-phosphate synthase large subunit 34195..34695 + 166 1786218 caiF b0034 - - transcriptional regulator of cai operon 34781..35392 - 203 1786219 caiE b0035 R COG0663 possible synthesis of cofactor for carnitine racemase and dehydratase 35377..36270 - 297 1786220 caiD b0036 I COG1024 carnitine racemase 36271..37839 - 522 1786221 caiC b0037 I COG0318 probable crotonobetaine/carnitine-CoA ligase 37898..39115 - 405 1786222 caiB b0038 C COG1804 l-carnitine dehydratase 39244..40386 - 380 1786223 caiA b0039 I COG1960 probable carnitine operon oxidoreductase 40417..41931 - 504 1786224 caiT b0040 M COG1292 probable carnitine transporter 42367..43173 + 268 1786225 fixA b0041 C COG2086 probable flavoprotein subunit, carnitine metabolism 43188..44129 + 313 1786226 fixB b0042 C COG2025 probable flavoprotein subunit, carnitine metabolism 44180..45466 + 428 1786227 fixC b0043 C COG0644 flavoprotein; electron transport 45463..45750 + 95 1786228 fixX b0044 C COG2440 putative ferredoxin 45807..47138 + 443 1786229 yaaU b0045 G COG0477 putative transport protein 47246..47776 + 176 1786231 yabF b0046 R COG2249 putative NAD(P)H oxidoreductase 47769..49631 + 620 1786232 kefC b0047 P COG1226 K+ efflux antiporter, glutathione-regulated 49823..50302 + 159 1786233 folA b0048 H COG0262 dihydrofolate reductase type I; trimethoprim resistance 50380..51222 - 280 1786234 apaH b0049 T COG0639 diadenosine tetraphosphatase 51229..51606 - 125 1786235 apaG b0050 P COG2967 orf, hypothetical protein 51609..52430 - 273 1786236 ksgA b0051 J COG0030 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase 52427..53416 - 329 1786237 pdxA b0052 H COG1995 pyridoxine biosynthesis 53416..54702 - 428 1786238 surA b0053 O COG0760 survival protein 54755..57109 - 784 1786239 imp b0054 M COG1452 organic solvent tolerance 57364..58179 + 271 1786241 yabH b0055 O COG1076 putative DNA binding protein 58474..59124 + 216 1786242 yabP b0056 - - orf, hypothetical protein 59121..59279 + 52 1786243 yabQ b0057 - - orf, hypothetical protein 59687..60346 - 219 1786244 yabO b0058 J COG0564 orf, hypothetical protein 60358..63264 - 968 1786245 hepA b0059 K COG0553 probable ATP-dependent RNA helicase 63429..65780 - 783 1786246 polB b0060 L COG0417 DNA polymerase II 65855..66550 - 231 1786247 araD b0061 G COG0235 L-ribulose-5-phosphate 4-epimerase 66835..68337 - 500 1786248 araA b0062 G COG2160 L-arabinose isomerase 68348..70048 - 566 1786249 araB b0063 C COG1069 L-ribulokinase 70387..71265 + 292 1786251 araC b0064 K COG2207 transcriptional regulator for ara operon 71351..72115 + 254 1786252 yabI b0065 S COG0586 orf, hypothetical protein 72229..72927 - 232 1786253 yabJ b0066 G COG1130 putative ATP-binding component of a transport system 72911..74521 - 536 1786254 yabK b0067 H COG1178 putative transport system permease protein 74497..75480 - 327 1786255 tbpA b0068 H COG1840 thiamin-binding periplasmic protein 75644..77299 - 551 1786256 yabN b0069 E COG0747 putative transport protein 77621..78799 + 392 1786257 yabM b0070 G COG0477 putative transport protein 78848..79453 - 201 1786258 leuD b0071 E COG0066 isopropylmalate isomerase subunit 79464..80864 - 466 1786259 leuC b0072 E COG0065 3-isopropylmalate isomerase (dehydratase) subunit 80867..81961 - 364 1786260 leuB b0073 E COG0473 3-isopropylmalate dehydrogenase 81958..83529 - 523 1786261 leuA b0074 E COG0119 2-isopropylmalate synthase 83622..83708 - 28 1786263 leuL b0075 - - leu operon leader peptide 84191..85312 + 373 1786264 leuO b0076 K COG0583 probable transcriptional activator for leuABCD operon 85540..87354 + 604 1786265 ilvI b0077 - - acetolactate synthase III, valine sensitive, large subunit 87357..87848 + 163 1786266 ilvH b0078 E COG0440 acetolactate synthase III, valine sensitive, small subunit 87860..87946 + 28 1786267 fruL b0079 - - fruR leader peptide 88028..89032 + 334 1786268 fruR b0080 K COG1609 transcriptional repressor of fru operon and others 89634..90092 + 152 1786269 yabB b0081 S COG2001 orf, hypothetical protein 90094..91035 + 313 1786270 yabC b0082 M COG0275 putative apolipoprotein 91032..91397 + 121 1786271 ftsL b0083 D COG3116 cell division protein; ingrowth of wall at septum 91413..93179 + 588 1786272 ftsI b0084 M COG0768 septum formation; penicillin-binding protein 3; peptidoglycan synthetase 93166..94653 + 495 1786273 murE b0085 M COG0769 meso-diaminopimelate-adding enzyme 94650..96008 + 452 1786274 murF b0086 M COG0770 D-alanine:D-alanine-adding enzyme 96002..97084 + 360 1786275 mraY b0087 M COG0472 phospho-N-acetylmuramoyl-pentapeptide transferase? 97087..98403 + 438 1786276 murD b0088 M COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 98403..99647 + 414 1786277 ftsW b0089 D COG0772 cell division; membrane protein involved in shape determination 99644..100711 + 355 1786278 murG b0090 M COG0707 UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 100765..102240 + 491 1786279 murC b0091 M COG0773 L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase 102233..103153 + 306 1786280 ddlB b0092 M COG1181 D-alanine-D-alanine ligase B, affects cell division 103155..103985 + 276 1786281 ftsQ b0093 M COG1589 cell division protein; ingrowth of wall at septum 103982..105244 + 420 1786282 ftsA b0094 D COG0849 ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes 105305..106456 + 383 1786284 ftsZ b0095 D COG0206 cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase 106557..107474 + 305 1786285 lpxC b0096 M COG0774 UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis 107630..108217 + 195 1786286 yacA b0097 - - orf, hypothetical protein 108279..110984 + 901 1786287 secA b0098 N COG0653 preprotein translocase; secretion protein 111044..111433 + 129 1786288 mutT b0099 L COG0494 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions 111564..111698 - 44 1786289 b0100 b0100 - - orf, hypothetical protein 111649..111846 - 65 1786290 yacG b0101 S COG3024 orf, hypothetical protein 111856..112599 - 247 1786291 yacF b0102 - - orf, hypothetical protein 112599..113219 - 206 1786292 yacE b0103 F COG0237 putative DNA repair protein 113444..114487 + 347 1786293 guaC b0104 F COG0516 GMP reductase 114407..114514 - 35 1786294 b0105 b0105 - - orf, hypothetical protein 114522..115724 - 400 1786295 hofC b0106 N COG1459 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake 115714..117099 - 461 1786296 hofB b0107 N COG2804 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake 117109..117549 - 146 1786297 ppdD b0108 N COG2165 prelipin peptidase dependent protein 117752..118645 - 297 1786299 nadC b0109 H COG0157 quinolinate phosphoribosyltransferase 118733..119284 + 183 1786300 ampD b0110 M COG3023 regulates ampC 119281..120135 + 284 1786301 ampE b0111 - - regulates ampC 120178..121551 - 457 1786302 aroP b0112 E COG1113 aromatic amino acid transport protein 122092..122856 + 254 1786303 pdhR b0113 K COG2186 transcriptional regulator for pyruvate dehydrogenase complex 123017..125680 + 887 1786304 aceE b0114 C COG2609 pyruvate dehydrogenase (decarboxylase component) 125695..127587 + 630 1786305 aceF b0115 C COG0508 pyruvate dehydrogenase (dihydrolipoyltransacetylase component) 127912..129336 + 474 1786307 lpdA b0116 C COG1249 lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex 129407..131260 - 617 1786308 yacH b0117 - - putative membrane protein 131615..134212 + 865 2367097 acnB b0118 C COG1049 aconitate hydrase B 134340..134750 + 136 1786310 yacL b0119 S COG3112 orf, hypothetical protein 134788..135582 - 264 1786311 speD b0120 E COG1586 S-adenosylmethionine decarboxylase 135598..136464 - 288 1786312 speE b0121 E COG0421 spermidine synthase = putrescine aminopropyltransferase 136570..137040 - 156 1786313 yacC b0122 - - orf, hypothetical protein 137083..138633 + 516 1786314 yacK b0123 Q COG2132 orf, hypothetical protein 138835..141225 - 796 1786316 gcd b0124 S COG1520 glucose dehydrogenase 141419..141967 + 182 1786317 hpt b0125 F COG0634 hypoxanthine phosphoribosyltransferase 142008..142670 - 220 1786318 yadF b0126 P COG0288 putative carbonic anhdrase (EC 4.2.1.1) 142779..143705 + 308 1786319 yadG b0127 Q COG1131 putative ATP-binding component of a transport system 143702..144472 + 256 1786320 yadH b0128 R COG0842 orf, hypothetical protein 144577..145017 + 146 1786321 yadI b0129 G COG2893 putative PTS enzyme II B component 145081..146310 + 409 1786322 yadE b0130 G COG0726 orf, hypothetical protein 146314..146694 - 126 1786323 panD b0131 H COG0853 aspartate 1-decarboxylase 146968..147870 + 300 1786324 yadD b0132 - - orf, hypothetical protein 147944..148795 - 283 1786325 panC b0133 H COG0414 pantothenate synthetase 148807..149601 - 264 1786326 panB b0134 H COG0413 3-methyl-2-oxobutanoate hydroxymethyltransferase 149715..150953 - 412 1786328 yadC b0135 - - putative fimbrial-like protein 151003..151599 - 198 1786329 yadK b0136 N COG3539 putative fimbrial protein 151626..152231 - 201 1786330 yadL b0137 - - putative fimbrial protein 152243..152854 - 203 1786331 yadM b0138 N COG3539 putative fimbrial-like protein 152829..155426 - 865 1786332 htrE b0139 N COG3188 probable outer membrane porin protein involved in fimbrial assembly 155461..156201 - 246 1786333 ecpD b0140 N COG3121 probable pilin chaperone similar to PapD 156299..156883 - 194 1786334 yadN b0141 N COG3539 putative fimbrial-like protein 157253..157732 - 159 1786335 folK b0142 H COG0801 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase 157729..159093 - 454 1786336 pcnB b0143 J COG0617 poly(A) polymerase I 159186..160112 - 308 1786337 yadB b0144 J COG0008 putative tRNA synthetase 160149..160604 - 151 1786338 dksA b0145 T COG1734 dnaK suppressor protein 160782..161486 - 234 1786340 sfsA b0146 G COG1489 probable regulator for maltose metabolism 161501..162040 - 179 1786341 yadP b0147 J COG1514 orf, hypothetical protein 162060..164534 + 824 1786342 hrpB b0148 L COG1643 helicase, ATP-dependent 164730..167264 + 844 1786343 mrcB b0149 M COG0744 peptidoglycan synthetase; penicillin-binding protein 1B 167484..169727 + 747 1786344 fhuA b0150 P COG1629 outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 169778..170575 + 265 1786345 fhuC b0151 P COG1120 ATP-binding component of hydroxymate-dependent iron transport 170575..171465 + 296 1786346 fhuD b0152 P COG0614 hydroxamate-dependent iron uptake, cytoplasmic membrane component 171462..173444 + 660 1786347 fhuB b0153 P COG0609 hydroxamate-dependent iron uptake, cytoplasmic membrane component 173602..174882 - 426 1786349 hemL b0154 H COG0001 glutamate-1-semialdehyde aminotransferase (aminomutase) 175107..176528 + 473 1786350 yadQ b0155 P COG0038 putative channel transporter 176610..176954 + 114 1786351 yadR b0156 S COG0316 orf, hypothetical protein 177001..177624 - 207 1786352 yadS b0157 S COG2860 orf, hypothetical protein 177662..178462 - 266 1786353 yadT b0158 P COG0614 orf, hypothetical protein 178455..179153 - 232 1786354 pfs b0159 F COG0775 orf, hypothetical protein 179237..180754 + 505 1786355 dgt b0160 F COG0232 deoxyguanosine triphosphate triphosphohydrolase 180884..182308 + 474 1786356 htrA b0161 O COG0265 periplasmic serine protease Do; heat shock protein HtrA 182445..183620 + 391 1786357 yaeG b0162 T COG2508 orf, hypothetical protein 183709..184095 - 128 1786359 yaeH b0163 - - putative structural protein 184257..185000 - 247 1786360 yaeI b0164 R COG1408 orf, hypothetical protein 184987..185118 - 43 1786361 b0165 b0165 - - orf, hypothetical protein 185123..185947 - 274 1786362 dapD b0166 E COG2171 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 185978..188650 - 890 1786363 glnD b0167 O COG2844 protein PII; uridylyltransferase acts on regulator of glnA 188712..189506 - 264 1786364 map b0168 J COG0024 methionine aminopeptidase 189874..190599 + 241 1786365 rpsB b0169 J COG0052 30S ribosomal subunit protein S2 190857..191708 + 283 1786366 tsf b0170 J COG0264 protein chain elongation factor EF-Ts 191855..192580 + 241 1786367 pyrH b0171 F COG0528 uridylate kinase 192872..193429 + 185 1786368 frr b0172 J COG0233 ribosome releasing factor 193521..194717 + 398 1786369 yaeM b0173 I COG0743 putative ATP-binding component of a transport system 194903..195664 + 253 1786371 yaeS b0174 I COG0020 orf, hypothetical protein 195785..196534 + 249 1786372 cdsA b0175 I COG0575 CDP-diglyceride synthetase 196546..197898 + 450 1786373 yaeL b0176 M COG0750 orf, hypothetical protein 197928..200360 + 810 1786374 yaeT b0177 M COG0729 orf, hypothetical protein 200482..200967 + 161 1786375 hlpA b0178 M COG2825 histone-like protein, located in outer membrane or nucleoid 200971..201996 + 341 1786376 lpxD b0179 M COG1044 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; third step of endotoxin (lipidA) synthesis 202101..202556 + 151 1786377 fabZ b0180 I COG0764 (3R)-hydroxymyristol acyl carrier protein dehydratase 202560..203348 + 262 1786378 lpxA b0181 M COG1043 UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis 203348..204496 + 382 1786379 lpxB b0182 M COG0763 tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step 204493..205089 + 198 1786380 rnhB b0183 L COG0164 RNAse HII, degrades RNA of DNA-RNA hybrids 205126..208608 + 1160 1786381 dnaE b0184 L COG0587 DNA polymerase III, alpha subunit 208621..209580 + 319 1786382 accA b0185 I COG0825 acetylCoA carboxylase, carboxytransferase component, alpha subunit 209679..211820 + 713 1786384 ldcC b0186 E COG1982 lysine decarboxylase 2, constitutive 211850..212266 + 138 1786385 yaeR b0187 E COG0346 orf, hypothetical protein 212331..213629 + 432 1786386 mesJ b0188 D COG0037 cell cycle protein 213678..213938 - 86 1786387 yaeO b0189 - - orf, hypothetical protein 214291..214836 + 181 1786388 yaeQ b0190 - - orf, hypothetical protein 214833..215255 + 140 1786389 yaeJ b0191 J COG1186 orf, hypothetical protein 215269..215979 + 236 1786390 cutF b0192 M COG3015 copper homeostasis protein (lipoprotein) 216179..217057 - 292 1786391 yaeF b0193 - - orf, hypothetical protein 217057..218775 - 572 1786392 proS b0194 J COG0442 proline tRNA synthetase 218887..219594 - 235 1786393 yaeB b0195 S COG1720 orf, hypothetical protein 219591..219995 - 134 1786394 rcsF b0196 - - regulator in colanic acid synthesis; interacts with RcsB 220113..220928 - 271 1786396 yaeC b0197 M COG1464 putative lipoprotein 220968..221621 - 217 1786397 yaeE b0198 R COG2011 putative transport system permease protein 221614..222645 - 343 1786398 abc b0199 R COG1135 ATP-binding component of a transporter 222833..223408 + 191 1786399 yaeD b0200 E COG0241 putative phosphatase 229167..229970 + 267 1786400 yafB b0207 R COG0656 putative aldose reductase (EC 1.1.1.21) 229967..230881 - 304 1786401 yafC b0208 K COG0583 putative transcriptional regulator LYSR-type 231122..231922 + 266 1786403 yafD b0209 S COG3021 orf, hypothetical protein 231926..232549 + 207 1786404 yafE b0210 Q COG0500 putative biotin synthesis protein 232597..233955 - 452 1786405 dniR b0211 M COG0741 transcriptional regulator for nitrite reductase (cytochrome c552) 234027..234782 - 251 1786406 gloB b0212 R COG0491 probable hydroxyacylglutathione hydrolase 234798..235538 + 246 1786407 yafS b0213 Q COG0500 orf, hypothetical protein 235535..236002 - 155 1786408 rnhA b0214 L COG0328 RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication 236067..236798 + 243 1786409 dnaQ b0215 L COG0847 DNA polymerase III, epsilon subunit 237335..238120 + 261 1786410 yafT b0217 - - putative aminopeptidase 238746..239084 - 112 1786411 yafU b0218 - - orf, hypothetical protein 239419..240189 - 256 1786412 yafV b0219 R COG0388 putative EC 3.5. amidase-type enzyme 240343..240816 + 157 1786413 ykfE b0220 - - orf, hypothetical protein 240859..243339 - 826 1786414 yafH b0221 I COG1960 putative acyl-CoA dehydrogenase (EC 1.3.99.-) 243543..244121 + 192 1786416 gmhA b0222 G COG0279 phosphoheptose isomerase 244327..245094 + 255 1786417 yafJ b0223 R COG0121 putative amidotransferase 245065..245805 - 246 1786418 yafK b0224 S COG3034 orf, hypothetical protein 245961..246239 - 92 1786419 yafQ b0225 S COG3041 orf, hypothetical protein 246242..246502 - 86 1786420 dinJ b0226 L COG3077 damage-inducible protein J 246712..247461 + 249 1786421 yafL b0227 M COG0791 putative lipoprotein 247637..248134 + 165 1786422 yafM b0228 L COG1943 orf, hypothetical protein 248358..250097 - 579 1786423 fhiA b0229 N COG1298 flagellar biosynthesis 250042..250827 + 261 1786424 mbhA b0230 N COG1360 putative motility protein 250898..251953 + 351 1786425 dinP b0231 L COG0389 damage-inducible protein P; putative tRNA synthetase 252005..252298 + 97 1786426 yafN b0232 - - orf, hypothetical protein 252301..252699 + 132 1786427 yafO b0233 - - orf, hypothetical protein 252709..253161 + 150 1786428 yafP b0234 K COG0454 orf, hypothetical protein 253467..253733 + 88 1786430 b0235 b0235 S COG1690 orf, hypothetical protein 253702..254202 + 166 1786431 prfH b0236 J COG1186 probable peptide chain release factor 254259..255716 - 485 1786432 pepD b0237 E COG2195 aminoacyl-histidine dipeptidase (peptidase D) 255977..256435 + 152 1786433 gpt b0238 F COG0503 guanine-hypoxanthine phosphoribosyltransferase 256527..257771 + 414 1786434 yafA b0239 R COG1073 orf, hypothetical protein 257829..258230 + 133 1786435 crl b0240 - - transcriptional regulator of cryptic csgA gene for curli surface fibers 258269..259324 - 351 1786436 phoE b0241 M COG3203 outer membrane pore protein E (E,Ic,NmpAB) 259612..260715 + 367 1786437 proB b0242 E COG0263 gamma-glutamate kinase 260727..261980 + 417 1786438 proA b0243 E COG0014 gamma-glutamylphosphate reductase 262552..262893 - 113 1786439 b0245 b0245 - - orf, hypothetical protein 262914..263231 - 105 1786440 yafW b0246 - - orf, hypothetical protein 263480..263956 - 158 2367100 ykfG b0247 L COG2003 putative DNA repair protein 263972..264430 - 152 1786442 yafX b0248 - - orf, hypothetical protein 264528..264767 - 79 1786443 ykfF b0249 - - orf, hypothetical protein 264844..265311 - 155 1786444 ykfB b0250 - - orf, hypothetical protein 265334..266191 - 285 1786445 yafY b0251 K COG2378 orf, hypothetical protein 266408..267244 - 278 1786446 yafZ b0252 - - orf, hypothetical protein 267321..268187 - 288 1786447 ykfA b0253 - - putative GTP-binding protein 268513..269406 - 297 1786448 perR b0254 K COG0583 putative transcriptional regulator LYSR-type 269466..269870 + 134 1786449 yi91a b0255 L COG2963 IS911 hypothetical protein, variant (IS911A) 269827..270978 + 383 1786450 tra8_1 b0256 L COG2826 IS30 transposase 271054..271479 + 141 1786451 b0257 b0257 L COG2801 putative transposase 272086..273216 + 376 1786452 ykfC b0258 L COG3344 orf, hypothetical protein 273325..274341 - 338 1786453 trs5_1 b0259 L COG3039 IS5 transposase 274525..275952 + 475 1786455 ykfD b0260 E COG0833 putative amino acid/amine transport protein 275939..276871 + 310 1786456 yagD b0261 E COG2040 putative enzyme 276980..278038 - 352 1786457 afuC b0262 G COG1130 putative ATP-binding component of a transport system 278038..278400 - 120 1786458 b0263 b0263 H COG1178 putative transport system permease protein 278402..278905 - 167 1786459 insB_2 b0264 L COG1662 IS1 protein InsB 278824..279099 - 91 1786460 insA_2 b0265 - - IS1 protein InsA 279609..279986 - 125 1786461 yagB b0266 - - orf, hypothetical protein 280053..281207 - 384 1786462 yagA b0267 L COG1425 orf, hypothetical protein 281481..282410 + 309 1786463 yagE b0268 E COG0329 putative lyase/synthase 282425..284392 + 655 1786464 yagF b0269 E COG0129 putative dehydratase 284619..286001 + 460 1786466 yagG b0270 G COG2211 putative permease 286013..287623 + 536 1786467 yagH b0271 G COG3507 putative beta-xylosidase (EC 3.2.1.37) 287628..288386 - 252 1786468 yagI b0272 K COG1414 putative regulator 288525..289529 - 334 1786469 argF b0273 E COG0078 ornithine carbamoyltransferase 2, chain F 289873..290376 - 167 1786470 insB_3 b0274 L COG1662 IS1 protein InsB 290295..290570 - 91 1786471 insA_3 b0275 - - IS1 protein InsA 290724..291455 + 243 1786472 yagJ b0276 - - orf, hypothetical protein 291546..292172 - 208 1786473 yagK b0277 - - orf, hypothetical protein 292444..293142 - 232 1786474 yagL b0278 - - DNA-binding protein 293169..294023 - 284 2367101 yagM b0279 - - orf, hypothetical protein 294363..294803 - 146 2367102 yagN b0280 - - orf, hypothetical protein 294920..296320 - 466 2367104 intF b0281 - - putative phage integrase 296605..297015 - 136 1786476 yagP b0282 - - putative transcriptional regulator LYSR-type 296994..297950 - 318 1786477 yagQ b0283 O COG1975 orf, hypothetical protein 297960..300158 - 732 1786478 yagR b0284 C COG1529 orf, hypothetical protein 300155..301111 - 318 1786479 yagS b0285 C COG1319 orf, hypothetical protein 301108..301797 - 229 1786480 yagT b0286 C COG2080 putative xanthine dehydrogenase (EC 1.1.1.20) 302215..302829 + 204 1786481 yagU b0287 - - orf, hypothetical protein 303077..303406 - 109 2367105 ykgJ b0288 - - putative ferredoxin 303719..304474 - 251 1786482 yagV b0289 - - orf, hypothetical protein 304398..306041 - 547 1786483 yagW b0290 - - putative receptor 306031..308556 - 841 1786484 yagX b0291 - - putative enzyme 308582..309250 - 222 1786485 yagY b0292 - - orf, hypothetical protein 309308..309895 - 195 1786486 yagZ b0293 - - orf, hypothetical protein 309970..310560 - 196 2367106 ykgK b0294 T COG2197 putative regulator 311336..311563 + 75 2367107 ykgL b0295 - - orf, hypothetical protein 311738..312001 - 87 2367109 ykgM b0296 J COG0254 putative ribosomal protein 313581..314468 + 295 1786488 eaeH b0297 - - attaching and effacing protein, pathogenesis factor 314506..314814 + 102 1786489 b0298 b0298 L COG2963 putative factor 314811..315677 + 288 1786490 tra5_5 b0299 L COG2801 IS3 putative transposase 315674..316393 - 239 1786491 ykgA b0300 K COG2207 putative ARAC-type regulatory protein 316950..317552 - 200 1786492 ykgB b0301 S COG3059 orf, hypothetical protein 317526..317795 + 89 1786493 b0302 b0302 - - orf, hypothetical protein 317555..317806 - 83 1786494 ykgI b0303 - - orf, hypothetical protein 317900..319252 - 450 1786495 ykgC b0304 C COG1249 putative oxidoreductase 319451..320305 + 284 1786496 ykgD b0305 K COG2207 putative ARAC-type regulatory protein 320832..321551 + 239 1786497 ykgE b0306 C COG0247 putative dehydrogenase subunit 321562..322989 + 475 1786498 ykgF b0307 C COG1139 orf, hypothetical protein 322829..323677 + 282 1786499 ykgG b0308 S COG1556 putative transporter 323632..323844 - 70 1786500 b0309 b0309 - - orf, hypothetical protein 323920..324588 - 222 1786502 ykgH b0310 - - orf, hypothetical protein 324801..326471 - 556 1786503 betA b0311 N COG2303 choline dehydrogenase, a flavoprotein 326485..327957 - 490 1786504 betB b0312 C COG1012 NAD+-dependent betaine aldehyde dehydrogenase 327971..328558 - 195 1786505 betI b0313 K COG1309 probably transcriptional repressor of bet genes 328687..330720 + 677 1786506 betT b0314 M COG1292 high-affinity choline transport 331595..332683 + 362 1786507 yahA b0315 T COG2200 orf, hypothetical protein 332725..333657 - 310 1786508 yahB b0316 K COG0583 putative transcriptional regulator LYSR-type 333749..334246 - 165 1786509 yahC b0317 - - orf, hypothetical protein 334504..335109 + 201 1786511 yahD b0318 R COG0666 putative transcription factor 335149..336012 + 287 1786512 yahE b0319 - - orf, hypothetical protein 336002..337549 + 515 1786513 yahF b0320 C COG0074 putative oxidoreductase subunit 337549..338967 + 472 1786514 yahG b0321 - - orf, hypothetical protein 338993..339313 + 106 1786515 yahH b0322 - - orf, hypothetical protein 339389..340339 + 316 1786516 yahI b0323 E COG0549 putative kinase (EC 2.7.2.2). 340349..341731 + 460 1786517 yahJ b0324 F COG0402 putative deaminase 342108..343157 + 349 1786518 yahK b0325 R COG1064 putative oxidoreductase 343400..344215 + 271 1786519 yahL b0326 - - orf, hypothetical protein 344598..344873 + 91 1786521 yahM b0327 - - orf, hypothetical protein 344890..345561 - 223 1786522 yahN b0328 E COG1280 putative cytochrome subunit of dehydrogenase 345708..345983 + 91 1786523 yahO b0329 - - orf, hypothetical protein 346081..347667 - 528 1786524 prpR b0330 O COG1221 regulator for prp operon 347906..348796 + 296 1786525 prpB b0331 G COG2513 putative phosphonomutase 2 348742..349188 - 148 1786526 b0332 b0332 - - orf, hypothetical protein 349236..350405 + 389 1786527 prpC b0333 C COG0372 putative citrate synthase; propionate metabolism? 350439..351890 + 483 1786528 prpD b0334 R COG2079 orf, hypothetical protein 351930..353816 + 628 1786529 prpE b0335 I COG0365 putative propionyl-CoA synthetase 354146..355405 + 419 1786530 codB b0336 F COG1457 cytosine permease/transport 355395..356678 + 427 1786531 codA b0337 F COG0402 cytosine deaminase 357015..357914 - 299 1786533 cynR b0338 K COG0583 cyn operon positive regulator 358023..358682 + 219 1786534 cynT b0339 P COG0288 carbonic anhydrase 358713..359183 + 156 1786535 cynS b0340 P COG1513 cyanate aminohydrolase, cyanase 359216..360370 + 384 1786536 cynX b0341 P COG2807 cyanate transport 360473..361084 - 203 1786537 lacA b0342 R COG0110 thiogalactoside acetyltransferase 361150..362403 - 417 1786538 lacY b0343 G COG0477 galactoside permease (M protein) 362455..365529 - 1024 1786539 lacZ b0344 G COG3250 beta-D-galactosidase 365652..366734 - 360 1786540 lacI b0345 K COG1609 transcriptional repressor of the lac operon 366811..367758 - 315 1786541 mhpR b0346 K COG1414 transcriptional regulator for mhp operon 367835..369499 + 554 1786543 mhpA b0347 H COG0654 3-(3-hydroxyphenyl)propionate hydroxylase 369501..370445 + 314 1786544 mhpB b0348 - - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 370400..371329 + 309 1786545 mhpC b0349 R COG0596 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 371333..372148 + 271 1786546 mhpD b0350 Q COG0179 2-keto-4-pentenoate hydratase 372145..373095 + 316 1786547 mhpF b0351 E COG0119 acetaldehyde dehydrogenase 373092..374105 + 337 1786548 mhpE b0352 - - 4-hydroxy-2-ketovalerate aldolase 374638..375894 + 418 1786549 mhpT b0353 G COG0477 putative transport protein 375879..376535 + 218 1786550 yaiL b0354 - - nucleoprotein/polynucleotide-associated enzyme 376759..377592 - 277 1786551 yaiM b0355 R COG0627 putative esterase (EC 3.1.1.1) 377686..378795 - 369 1786552 adhC b0356 C COG1062 alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent 378830..379126 - 98 1786553 yaiN b0357 S COG1937 putative alpha helix chain 379293..380066 - 257 1786555 yaiO b0358 - - orf, hypothetical protein 380068..380511 - 147 1786556 b0359 b0359 R COG0110 putative transferase 380530..380940 + 136 1786557 yi21_1 b0360 L COG2963 IS2 hypothetical protein 380898..381803 + 301 1786558 yi22_1 b0361 - - IS2 hypothetical protein 381728..382114 - 128 1786559 b0362 b0362 - - orf, hypothetical protein 381963..383159 - 398 1786560 yaiP b0363 M COG0463 polysaccharide metabolism 383283..383693 - 136 1786561 yaiS b0364 - - orf, hypothetical protein 384399..385418 + 339 1786562 tauA b0365 P COG0715 taurine transport system periplasmic protein 385431..386198 + 255 1786563 tauB b0366 P COG1116 taurine ATP-binding component of a transport system 386195..387022 + 275 1786564 tauC b0367 P COG0600 taurine transport system permease protein 387019..387870 + 283 1786565 tauD b0368 Q COG2175 taurine dioxygenase, 2-oxoglutarate-dependent 387977..388984 - 335 1786566 hemB b0369 H COG0113 5-aminolevulinate dehydratase = porphobilinogen synthase 389121..389390 - 89 1786567 b0370 b0370 - - orf, hypothetical protein 389475..390935 + 486 1786569 yaiT b0371 - - orf, hypothetical protein 390963..391829 - 288 1786570 tra5_1 b0372 L COG2801 IS3 putative transposase 391826..392134 - 102 1786571 b0373 b0373 L COG2963 putative factor 392239..393642 + 467 1786572 yaiU b0374 - - putative flagellin structural protein 393685..394353 + 222 1786573 yaiV b0375 - - orf, hypothetical protein 394354..395511 - 385 1786574 yaiH b0376 M COG1680 putative enzyme 395863..397083 + 406 1786575 sbmA b0377 I COG1133 sensitivity to microcin B17, possibly envelop protein 397096..398190 + 364 1786576 yaiW b0378 - - orf, hypothetical protein 398249..398557 - 102 1786577 b0379 b0379 - - orf, hypothetical protein 398685..399029 + 114 1786578 b0380 b0380 - - orf, hypothetical protein 399053..400147 - 364 1786579 ddlA b0381 M COG1181 D-alanine-D-alanine ligase A 400610..400870 + 86 1786581 yaiB b0382 - - orf, hypothetical protein 400902..402386 + 494 1786582 phoA b0383 P COG1785 alkaline phosphatase 402487..402825 + 112 1786583 psiF b0384 - - induced by phosphate starvation 402927..404042 + 371 1786584 yaiC b0385 T COG2199 orf, hypothetical protein 404059..404868 - 269 1786585 proC b0386 E COG0345 pyrroline-5-carboxylate reductase 404868..405446 + 192 1786586 yaiI b0387 S COG1671 orf, hypothetical protein 405629..406153 + 174 1786587 aroL b0388 E COG0703 shikimate kinase II 406203..406394 + 63 1786588 yaiA b0389 - - orf, hypothetical protein 406652..407329 + 225 1786589 aroM b0390 - - protein of aro operon, regulated by aroR 407401..407685 + 94 1786590 yaiE b0391 S COG3123 orf, hypothetical protein 407893..408174 + 93 1786591 b0392 b0392 - - orf, hypothetical protein 408332..409243 - 303 1786592 yaiD b0393 L COG2974 orf, hypothetical protein 409230..410276 + 348 1786593 yajF b0394 K COG1940 possible NAGC-like transcriptional regulator 410255..410497 + 80 1786594 b0395 b0395 - - orf, hypothetical protein 410521..411705 - 394 1786595 araJ b0396 G COG2814 involved in either transport or processing of arabinose polymers 411831..414977 - 1048 1786597 sbcC b0397 L COG0419 ATP-dependent dsDNA exonuclease 414974..416176 - 400 1786598 sbcD b0398 L COG0420 ATP-dependent dsDNA exonuclease 416366..417055 + 229 1786599 phoB b0399 T COG0745 positive response regulator for pho regulon, sensor is PhoR (or CreC) 417113..418408 + 431 1786600 phoR b0400 T COG0642 positive and negative sensor protein for pho regulon 418815..420134 + 439 1786601 brnQ b0401 E COG1114 branched chain amino acid transport system II carrier protein 420210..421583 + 457 1786602 proY b0402 E COG1113 proline permease transport protein 421739..423556 + 605 1786604 malZ b0403 G COG0366 maltodextrin glucosidase 423561..424142 - 193 1786605 yajB b0404 S COG3124 putative glycoprotein 424235..425305 + 356 1786606 queA b0405 J COG0809 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase 425361..426488 + 375 1786607 tgt b0406 J COG0343 tRNA-guanine transglycosylase 426511..426843 + 110 1786608 yajC b0407 N COG1862 orf, hypothetical protein 426871..428718 + 615 1786609 secD b0408 N COG0342 protein secretion; membrane protein, part of the channel 428729..429700 + 323 1786610 secF b0409 N COG0341 protein secretion, membrane protein 429829..430176 + 115 1786611 yajD b0410 - - orf, hypothetical protein 430353..431237 - 294 1786612 tsx b0411 M COG3248 nucleoside channel; receptor of phage T6 and colicin K 431536..432135 - 199 1786613 yajI b0412 - - orf, hypothetical protein 432226..432675 + 149 1786615 ybaD b0413 K COG1327 orf, hypothetical protein 432679..433782 + 367 1786616 ribD b0414 H COG0117 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis 433871..434341 + 156 1786617 ribH b0415 H COG0054 riboflavin synthase, beta chain 434361..434780 + 139 1786618 nusB b0416 K COG0781 transcription termination; L factor 434858..435835 + 325 1786619 thiL b0417 H COG0611 thiamin-monophosphate kinase 435813..436331 + 172 1786620 pgpA b0418 I COG1267 phosphatidylglycerophosphatase 436385..437431 - 348 1786621 yajO b0419 C COG0667 putative NAD(P)H-dependent xylose reductase 437539..439401 - 620 1786622 dxs b0420 H COG1154 1-deoxyxylulose-5-phosphate synthase; flavoprotein 439426..440325 - 299 1786623 ispA b0421 H COG0142 geranyltranstransferase (farnesyldiphosphate synthase) 440325..440567 - 80 1786624 xseB b0422 L COG1722 exonuclease VII, small subunit 440773..442221 + 482 1786625 yajK b0423 H COG0301 putative oxidoreductase 442275..442871 - 198 1786626 thiJ b0424 R COG0693 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis 442828..443739 - 303 1786627 apbA b0425 H COG1893 involved in thiamin biosynthesis, alternative pyrimidine biosynthesis 443889..444398 + 169 1786629 yajQ b0426 S COG1666 orf, hypothetical protein 444526..445896 - 456 1786630 yajR b0427 G COG0477 putative transport protein 446039..446929 - 296 1786631 cyoE b0428 H COG0109 protoheme IX farnesyltransferase (haeme O biosynthesis) 446941..447270 - 109 1786632 cyoD b0429 C COG3125 cytochrome o ubiquinol oxidase subunit IV 447270..447884 - 204 1786633 cyoC b0430 C COG1845 cytochrome o ubiquinol oxidase subunit III 447874..449865 - 663 1786634 cyoB b0431 C COG0843 cytochrome o ubiquinol oxidase subunit I 449887..450834 - 315 1786635 cyoA b0432 C COG1622 cytochrome o ubiquinol oxidase subunit II 451294..452769 - 491 1786636 ampG b0433 G COG0477 regulates beta-lactamase synthesis 452813..453493 - 226 1786637 yajG b0434 M COG3056 putative polymerase/proteinase 453663..454013 + 116 1786638 bolA b0435 T COG0271 possible regulator of murein genes 454357..455655 + 432 1786640 tig b0436 O COG0544 trigger factor; a molecular chaperone involved in cell division 455901..456524 + 207 1786641 clpP b0437 N COG0740 ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 456650..457924 + 424 1786642 clpX b0438 O COG1219 ATP-dependent specificity component of clpP serine protease, chaperone 458112..460466 + 784 1786643 lon b0439 O COG0466 DNA-binding, ATP-dependent protease La; heat shock K-protein 460675..460947 + 90 1786644 hupB b0440 L COG0776 DNA-binding protein HU-beta, NS1 (HU-1) 461139..463010 + 623 1786645 ybaU b0441 O COG0760 putative protease maturation protein 463161..463532 + 123 1786646 ybaV b0442 L COG1555 orf, hypothetical protein 463626..464024 + 132 1786647 ybaW b0443 R COG0824 orf, hypothetical protein 464076..464771 - 231 1786648 ybaX b0444 R COG0603 orf, hypothetical protein 464836..466536 - 566 1786650 ybaE b0445 E COG0747 orf, hypothetical protein 466624..467454 + 276 1786651 cof b0446 R COG0561 orf, hypothetical protein 467520..468065 + 181 1786652 ybaO b0447 K COG1522 putative LRP-like transcriptional regulator 468095..469867 + 590 1786653 mdlA b0448 Q COG1132 ATP-binding component of a transport system 469860..471641 + 593 1786654 mdlB b0449 Q COG1132 putative ATP-binding component of a transport system 471822..472160 + 112 1786655 glnK b0450 E COG0347 nitrogen regulatory protein P-II 2 472190..473476 + 428 1786656 amtB b0451 P COG0004 probable ammonium transporter 473525..474385 - 286 1786657 tesB b0452 I COG1946 acyl-CoA thioesterase II 474603..475175 + 190 1786658 ybaY b0453 - - glycoprotein/polysaccharide metabolism 475206..475595 - 129 1786659 ybaZ b0454 L COG0350 orf, hypothetical protein 475896..476249 + 117 1786661 ybaA b0456 - - orf, hypothetical protein 476291..477847 - 518 1786662 ylaB b0457 T COG2200 orf, hypothetical protein 478005..478514 - 169 1786663 ylaC b0458 - - orf, hypothetical protein 478591..479142 - 183 1786664 ylaD b0459 R COG0110 putative transferase 479314..479532 - 72 1786665 hha b0460 - - haemolysin expression modulating protein 479558..479932 - 124 1786666 ybaJ b0461 - - orf, hypothetical protein 480478..483627 - 1049 1786667 acrB b0462 Q COG0841 acridine efflux pump 483650..484843 - 397 1786668 acrA b0463 Q COG0845 acridine efflux pump 484985..485632 + 215 1786669 acrR b0464 K COG1309 acrAB operon repressor 485760..489122 + 1120 1786670 aefA b0465 M COG3264 putative alpha helix protein 489334..489495 - 53 1786672 ybaM b0466 - - orf, hypothetical protein 489509..490036 - 175 1786673 priC b0467 - - primosomal replication protein N'' 490106..490483 + 125 1786674 ybaN b0468 S COG2832 putative gene 58 490636..491187 + 183 1786675 apt b0469 F COG0503 adenine phosphoribosyltransferase 491316..493247 + 643 1786676 dnaX b0470 L COG2812 DNA polymerase III, tau and gamma subunits; DNA elongation factor III 493300..493629 + 109 1786677 ybaB b0471 S COG0718 orf, hypothetical protein 493629..494234 + 201 1786678 recR b0472 L COG0353 recombination and repair 494344..496218 + 624 1786679 htpG b0473 O COG0326 chaperone Hsp90, heat shock protein C 62.5 496399..497043 + 214 1786680 adk b0474 F COG0563 adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity 497279..498241 + 320 1786681 hemH b0475 H COG0276 ferrochelatase: final enzyme of heme biosynthesis 498238..499197 - 319 1786682 ybaC b0476 I COG0657 putative lipase (EC 3.1.1.-) 499349..500653 + 434 1786684 gsk b0477 G COG0524 inosine-guanosine kinase 500786..502462 - 558 1786685 ybaL b0478 P COG1226 putative transport protein 502700..503920 - 406 1786686 fsr b0479 G COG0477 fosmidomycin resistance protein 504138..505790 + 550 1786687 ushA b0480 F COG0737 UDP-sugar hydrolase (5'-nucleotidase) 505827..506306 - 159 1786688 ybaK b0481 S COG2606 orf, hypothetical protein 506510..507304 - 264 1786689 ybaP b0482 - - putative ligase 507388..507783 + 131 1786690 ybaQ b0483 R COG3093 orf, hypothetical protein 508099..510603 - 834 1786691 ybaR b0484 P COG2217 putative ATPase 510865..511797 + 310 1786693 ybaS b0485 E COG2066 putative glutaminase 511800..513092 + 430 1786694 ybaT b0486 E COG0531 putative amino acid/amine transport protein 513217..513624 + 135 1786695 ybbI b0487 K COG0789 putative transcriptional regulator 513625..514080 - 151 1786696 ybbJ b0488 N COG1585 orf, hypothetical protein 514080..514997 - 305 1786697 ybbK b0489 O COG0330 putative protease 515143..515820 + 225 1786698 ybbL b0490 E COG1101 putative ATP-binding component of a transport system 515780..516586 + 268 1786699 ybbM b0491 R COG0390 putative metal resistance protein 516649..517539 - 296 1786700 ybbN b0492 O COG3118 putative thioredoxin-like protein 517564..518373 - 269 1786701 ybbO b0493 Q COG1028 putative oxidoreductase 518363..518989 - 208 1786702 tesA b0494 E COG2755 acyl-CoA thioesterase I; also functions as protease I 518957..519643 + 228 1786703 ybbA b0495 R COG1136 putative ATP-binding component of a transport system 519640..522054 + 804 1786704 ybbP b0496 S COG3127 putative oxidoreductase 522485..526765 + 1426 1786706 rhsD b0497 M COG3209 rhsD protein in rhs element 526805..527173 + 122 1786707 ybbC b0498 - - orf, hypothetical protein 527173..527883 + 236 1786708 b0499 b0499 M COG3209 orf, hypothetical protein 527864..528124 + 86 1786709 ybbD b0500 - - orf, hypothetical protein 528163..528354 + 63 1786710 b0501 b0501 - - orf, hypothetical protein 528869..529276 - 135 1786711 b0502 b0502 - - orf, hypothetical protein 529356..530450 - 364 1786712 ybbB b0503 R COG2603 putative capsule anchoring protein 530519..531445 - 308 1786713 ybbS b0504 K COG0583 putative transcriptional regulator LYSR-type 531675..532157 + 160 1786714 ybbT b0505 - - orf, hypothetical protein 532235..533050 + 271 1786715 ybbU b0506 K COG1414 putative regulator 533140..534921 + 593 1786717 gcl b0507 E COG0028 glyoxylate carboligase 534934..535710 + 258 1786718 gip b0508 G COG3622 glyoxylate-induced protein 535810..536688 + 292 1786719 ybbQ b0509 I COG2084 putative oxidoreductase 536720..536998 + 92 1786720 ybbV b0510 - - orf, hypothetical protein 536998..538311 + 437 1786721 ybbW b0511 F COG1953 putative transport protein 538371..539732 + 453 1786722 ybbX b0512 F COG0044 putative hydrolase 539783..541090 + 435 1786723 ybbY b0513 F COG2233 putative transport 541112..542257 + 381 1786724 ybbZ b0514 G COG1929 orf, hypothetical protein 542485..543270 - 261 1786725 ylbA b0515 - - orf, hypothetical protein 543281..544516 - 411 1786726 ylbB b0516 E COG0624 putative hydantoin utilization protein 544538..545587 - 349 1786727 ylbC b0517 C COG2055 putative malate dehydrogenase (EC 1.1.1.37) 545904..547571 + 555 1786729 fdrA b0518 C COG0074 involved in protein transport; multicopy suppressor of dominant negative ftsH mutants 547838..548839 + 333 1786730 ylbE b0519 - - orf, hypothetical protein 548850..549665 + 271 1786731 ylbF b0520 - - putative carboxylase 549662..550555 + 297 1786732 arcC b0521 E COG0549 putative carbamate kinase (EC 2.7.2.2) 550750..551817 - 355 1786733 purK b0522 F COG0026 phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit 551814..552323 - 169 1786734 purE b0523 F COG0041 phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit 552441..553163 - 240 1786735 ybbF b0524 S COG2908 orf, hypothetical protein 553166..553660 - 164 1786736 ppiB b0525 O COG0652 peptidyl-prolyl cis-trans isomerase B (rotamase B) 553834..555219 + 461 1786737 cysS b0526 J COG0215 cysteine tRNA synthetase 555255..555776 - 173 1786738 ybcI b0527 R COG1988 orf, hypothetical protein 555884..556117 - 77 1786740 ybcJ b0528 S COG2501 orf, hypothetical protein 556098..556964 - 288 1786741 folD b0529 H COG0190 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase 557402..557977 + 191 1786742 sfmA b0530 - - putative fimbrial-like protein 558197..558889 + 230 1786743 sfmC b0531 - - putative chaperone 558920..561523 + 867 1786744 sfmD b0532 - - putative outer membrane protein, export function 561565..562542 + 325 1786745 sfmH b0533 - - involved in fimbrial asembly 562553..563068 + 171 1786746 sfmF b0534 N COG3539 putative fimbrial-like protein 563071..563703 - 210 1786747 fimZ b0535 T COG2197 fimbrial Z protein; probable signal transducer 564038..565201 - 387 1786748 intD b0537 L COG0582 prophage DLP12 integrase 565195..565755 + 186 1786749 b0538 b0538 - - putative sensory transduction regulator 565321..565584 - 87 1786750 b0539 b0539 - - putative exonuclease (EC 3.1.11.3) similar to lambda 566056..566364 + 102 1786752 b0540 b0540 L COG2963 orf, hypothetical protein 566361..567227 + 288 1786753 tra5_2 b0541 L COG2801 IS3 putative transposase 567333..567470 + 45 1786754 b0542 b0542 - - orf, hypothetical protein 567538..567870 + 110 1786755 emrE b0543 P COG2076 methylviologen resistance 568125..569651 + 508 1786756 ybcK b0544 L COG1961 orf, hypothetical protein 570116..570667 + 183 1786757 ybcL b0545 R COG1881 orf, hypothetical protein 570677..571474 + 265 1786758 ybcM b0546 K COG2207 putative ARAC-type regulatory protein 571689..572144 + 151 1786759 ybcN b0547 - - orf, hypothetical protein 572144..572314 + 56 1786760 ninE b0548 - - similar to phage 82 and lambda proteins 572307..572597 + 96 1786761 ybcO b0549 - - orf, hypothetical protein 572594..572956 + 120 1786762 rus b0550 - - endodeoxyribonuclease RUS (Holliday junction resolvase) 573179..573562 + 127 1786763 ybcQ b0551 - - orf, hypothetical protein 573960..574976 - 338 1786764 trs5_2 b0552 L COG3039 IS5 transposase 574981..576108 - 375 1786765 nmpC b0553 M COG3203 outer membrane porin protein; locus of qsr prophage 576621..576836 + 71 1786767 ybcR b0554 - - orf, hypothetical protein 576836..577333 + 165 1786768 ybcS b0555 - - bacteriophage lambda lysozyme homolog 577330..577791 + 153 1786769 ybcT b0556 - - bacteriophage lambda endopeptidase homolog 577823..578116 - 97 1786770 ybcU b0557 - - bacteriophage lambda Bor protein homolog 578407..578859 - 150 1786771 ybcV b0558 - - putative an envelop protein 579103..579309 + 68 1786772 ybcW b0559 - - orf, hypothetical protein 580057..580602 + 181 1786773 nohB b0560 - - bacteriophage DNA packaging protein 580577..581320 + 247 1786774 ybcX b0561 - - orf, hypothetical protein 581375..581806 - 143 1786775 ybcY b0562 - - orf, hypothetical protein 582098..582283 + 61 2367110 ylcE b0563 - - orf, hypothetical protein 582904..583653 + 249 1786776 appY b0564 K COG2207 regulatory protein affecting appA and other genes 583903..584856 - 317 1786777 ompT b0565 - - outer membrane protein 3b (a), protease VII 585370..586131 - 253 1786778 envY b0566 K COG2207 envelope protein; thermoregulation of porin biosynthesis 586314..587204 - 296 1786779 ybcH b0567 - - orf, hypothetical protein 587205..590177 - 990 1786780 nfrA b0568 R COG0457 bacteriophage N4 receptor, outer membrane protein 590164..592401 - 745 1786781 nfrB b0569 - - bacteriophage N4 receptor, outer membrane protein 592551..593993 - 480 1786783 ybcZ b0570 T COG0642 putative 2-component sensor protein 593983..594666 - 227 1786784 ylcA b0571 T COG0745 putative 2-component transcriptional regulator 594823..596196 + 457 1786785 ylcB b0572 M COG1538 putative resistance protein 596354..596686 + 110 1786786 ylcC b0573 - - orf, hypothetical protein 596702..597925 + 407 1786787 ylcD b0574 Q COG0845 putative resistance protein 597937..601080 + 1047 1786788 ybdE b0575 Q COG0841 putative inner membrane component for iron transport 601182..602558 + 458 1786789 pheP b0576 E COG1113 phenylalanine-specific transport system 602639..603886 - 415 1786791 ybdG b0577 M COG0668 putative transport 603994..604647 - 217 1786792 nfnB b0578 C COG0778 oxygen-insensitive NAD(P)H nitroreductase 604741..605109 - 122 1786793 ybdF b0579 S COG2315 orf, hypothetical protein 605174..605422 - 82 1786794 ybdJ b0580 - - orf, hypothetical protein 605488..606606 - 372 1786795 ybdK b0581 S COG2170 orf, hypothetical protein 607288..608400 + 370 1786796 yi81_2 b0582 L COG3385 IS186 hypothetical protein 608682..609311 - 209 1786797 entD b0583 Q COG2977 enterochelin synthetase, component D 609477..611717 - 746 1786798 fepA b0584 P COG1629 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D 612038..613162 + 374 1786799 fes b0585 P COG2382 enterochelin esterase 613380..617261 + 1293 1786801 entF b0586 Q COG3319 ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F) 617477..618610 + 377 1786802 fepE b0587 - - ferric enterobactin (enterochelin) transport 618607..619422 - 271 1786803 fepC b0588 P COG1120 ATP-binding component of ferric enterobactin transport 619419..620411 - 330 1786804 fepG b0589 P COG0609 ferric enterobactin transport protein 620408..621412 - 334 1786805 fepD b0590 P COG0609 ferric enterobactin (enterochelin) transport 621523..622773 + 416 1786806 ybdA b0591 G COG0477 putative transport 622777..623733 - 318 1786807 fepB b0592 P COG0614 ferric enterobactin (enterochelin) binding protein; periplasmic component 624108..625283 + 391 1786809 entC b0593 H COG1169 isochorismate hydroxymutase 2, enterochelin biosynthesis 625293..626903 + 536 1786810 entE b0594 Q COG1021 2,3-dihydroxybenzoate-AMP ligase 626917..627774 + 285 1786811 entB b0595 Q COG3433 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase 627774..628520 + 248 1786812 entA b0596 Q COG1028 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis 628523..628936 + 137 1786813 ybdB b0597 Q COG2050 orf, hypothetical protein 629117..631222 + 701 1786814 cstA b0598 T COG1966 carbon starvation protein 631612..632700 - 362 1786815 ybdH b0599 C COG0371 putative oxidoreductase 632809..633969 + 386 1786816 ybdL b0600 E COG0436 putative aminotransferase 633970..634599 - 209 1786817 ybdM b0601 - - orf, hypothetical protein 634572..635792 - 406 1786818 ybdN b0602 - - orf, hypothetical protein 635939..636841 - 300 1786820 ybdO b0603 K COG0583 putative transcriptional regulator LYSR-type 637050..637856 - 268 1786821 dsbG b0604 O COG1651 thiol:disulfide interchange protein 638168..638731 + 187 1786822 ahpC b0605 O COG0450 alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides 638946..640541 + 531 1786823 ahpF b0606 O COG3634 alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides 640662..641090 - 142 1786824 ybdQ b0607 T COG0589 orf, hypothetical protein 641311..642549 + 412 1786825 ybdR b0608 E COG1063 putative oxidoreductase 642630..643091 + 153 1786826 b0609 b0609 - - orf, hypothetical protein 642780..643190 - 136 1786827 rnk b0610 K COG0782 regulator of nucleoside diphosphate kinase 643420..644226 - 268 1786828 rna b0611 - - RNase I, cleaves phosphodiester bond between any two nucleotides 644340..645803 - 487 1786829 ybdS b0612 - - putative a membrane protein 645854..646732 - 292 1786830 citG b0613 S COG1767 orf, hypothetical protein 646707..647258 - 183 1786831 ybdU b0614 - - orf, hypothetical protein 647262..648794 - 510 1786832 citF b0615 C COG3051 citrate lyase alpha chain 648805..649728 - 307 1786833 citE b0616 G COG2301 citrate lyase beta chain (acyl lyase subunit) 649710..650006 - 98 1786834 citD b0617 C COG3052 citrate lyase acyl carrier protein (gamma chain) 650021..651166 - 381 1786835 citC b0618 C COG3053 citrate lyase synthetase (citrate (pro-3S)-lyase ligase 651458..653116 + 552 1786837 citA b0619 T COG3290 putative sensor-type protein 653085..653765 + 226 1786838 citB b0620 T COG2197 sequence similarity to Shigella regulator 653806..655191 - 461 1786839 dcuC b0621 C COG3069 transport of dicarboxylates 655780..656340 + 186 1786840 crcA b0622 - - orf, hypothetical protein 656515..656724 + 69 1786841 cspE b0623 K COG1278 cold shock protein 656778..657161 - 127 1786842 crcB b0624 D COG0239 orf, hypothetical protein 657254..657481 + 75 1786843 ybeH b0625 - - orf, hypothetical protein 657478..658041 + 187 1786844 ybeM b0626 R COG0388 putative amidase 658170..658373 + 67 1786845 ybeC b0627 N COG1826 orf, hypothetical protein 658474..659439 - 321 1786846 lipA b0628 H COG0320 lipoate synthesis, sulfur insertion? 659648..660448 - 266 1786847 ybeF b0629 K COG0583 putative transcriptional regulator LYSR-type 660860..661435 - 191 1786848 lipB b0630 H COG0321 protein of lipoate biosynthesis 661602..661865 - 87 1786850 ybeD b0631 S COG2921 orf, hypothetical protein 661975..663186 - 403 1786851 dacA b0632 M COG1686 D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 663325..664413 - 362 1786852 rlpA b0633 M COG0797 a minor lipoprotein 664424..665536 - 370 1786853 mrdB b0634 D COG0772 rod shape-determining membrane protein; sensitivity to radiation and drugs 665539..667440 - 633 1786854 mrdA b0635 M COG0768 cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2 667471..667938 - 155 1786855 ybeA b0636 S COG1576 orf, hypothetical protein 667942..668151 - 69 1786856 ybeB b0637 S COG0799 orf, hypothetical protein 668519..669130 - 203 1786857 phpB b0638 G COG0406 homolog of Salmonella cobC, a phosphohistidine protein 669154..669795 - 213 1786858 ybeN b0639 H COG1057 orf, hypothetical protein 669797..670828 - 343 1786859 holA b0640 L COG1466 DNA polymerase III, delta subunit 670828..671409 - 193 1786860 rlpB b0641 M COG2980 a minor lipoprotein 671424..674006 - 860 1786861 leuS b0642 J COG0495 leucine tRNA synthetase 674241..674723 + 160 1786863 ybeL b0643 - - putative alpha helical protein 674793..675776 - 327 1786864 ybeQ b0644 R COG0790 orf, hypothetical protein 675934..676641 + 235 1786865 ybeR b0645 - - orf, hypothetical protein 676638..678065 + 475 1786866 ybeS b0646 - - putative enzyme of polynucleotide modification 678075..678629 - 184 1786867 ybeT b0647 R COG0790 orf, hypothetical protein 678731..679438 + 235 1786868 ybeU b0648 - - putative tRNA ligase 679435..680886 + 483 1786869 ybeV b0649 - - orf, hypothetical protein 680946..682616 - 556 1786870 ybeW b0650 O COG0443 putative dnaK protein 682700..683635 - 311 1786871 ybeK b0651 F COG1957 putative tRNA synthetase 683753..684478 - 241 1786872 gltL b0652 E COG1126 ATP-binding protein of glutamate/aspartate transport system 684478..685152 - 224 1786873 gltK b0653 E COG0765 glutamate/aspartate transport system permease 685152..685892 - 246 1786874 gltJ b0654 E COG0765 glutamate/aspartate transport system permease 686062..686970 - 302 1786876 ybeJ b0655 E COG0834 putative periplasmic binding transport protein 687220..688236 - 338 1786877 trs5_3 b0656 L COG3039 IS5 transposase 688566..690104 - 512 1786878 lnt b0657 M COG0815 apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane 690129..691007 - 292 1786879 ybeX b0658 R COG1253 putative transport protein 691097..691564 - 155 1786880 ybeY b0659 R COG0319 orf, hypothetical protein 691561..692640 - 359 1786881 ybeZ b0660 T COG1702 putative ATP-binding protein in pho regulon 692754..694178 - 474 1786882 yleA b0661 J COG0621 orf, hypothetical protein 694324..695499 + 391 1786883 yleB b0662 - - orf, hypothetical protein 695581..695916 + 111 1786884 b0663 b0663 - - putative RNA 695931..696068 + 45 1786885 b0667 b0667 - - putative RNA 696065..696184 + 39 1786886 b0669 b0669 - - putative RNA 696185..696337 + 50 1786887 b0671 b0671 - - putative RNA 696736..698400 - 554 1786889 asnB b0674 E COG0367 asparagine synthetase B 698797..699549 - 250 1786890 nagD b0675 G COG0647 N-acetylglucosamine metabolism 699597..700817 - 406 1786891 nagC b0676 K COG1940 transcriptional repressor of nag (N-acetylglucosamine) operon 700826..701974 - 382 1786892 nagA b0677 G COG1820 N-acetylglucosamine-6-phosphate deacetylase 702034..702834 - 266 1786893 nagB b0678 G COG0363 glucosamine-6-phosphate deaminase 703167..705113 + 648 1786894 nagE b0679 G COG1264 PTS system, N-acetylglucosamine-specific enzyme IIABC 705316..706980 + 554 1786895 glnS b0680 J COG0008 glutamine tRNA synthetase 707557..708963 + 468 1786897 ybfM b0681 - - orf, hypothetical protein 709013..709339 + 108 1786898 ybfN b0682 - - orf, hypothetical protein 709423..709869 - 148 1786899 fur b0683 P COG0735 negative regulator 710158..710688 - 176 1786900 fldA b0684 C COG0716 flavodoxin 1 710828..711190 - 120 1786901 ybfE b0685 - - orf, hypothetical protein 711261..712025 - 254 1786902 ybfF b0686 R COG0596 orf, hypothetical protein 712210..712755 + 181 1786903 seqA b0687 L COG3057 negative modulator of initiation of replication 712781..714421 + 546 1786904 pgm b0688 G COG0033 phosphoglucomutase 714635..715129 + 164 1786905 ybfP b0689 - - putative pectinase 715170..715532 - 120 1786906 ybfG b0690 - - orf, hypothetical protein 715611..715928 - 105 1786907 ybfH b0691 - - orf, hypothetical protein 716169..717488 - 439 1786908 potE b0692 E COG0531 putrescine transport protein 717485..719683 - 732 1786909 speF b0693 E COG1982 ornithine decarboxylase isozyme, inducible 720279..720956 - 225 1786911 kdpE b0694 T COG0745 regulator of kdp operon (transcriptional effector) 720953..723637 - 894 1786912 kdpD b0695 T COG0642 sensor for high-affinity potassium transport system 723630..724202 - 190 1786913 kdpC b0696 P COG2156 high-affinity potassium transport system 724211..726259 - 682 1786914 kdpB b0697 P COG2216 ATPase of high-affinity potassium transport system, B chain 726282..727955 - 557 1786915 kdpA b0698 P COG2060 ATPase of high-affinity potassium transport system, A chain 728357..728563 + 68 1786916 ybfA b0699 - - orf, hypothetical protein 728806..732999 + 1397 1786917 rhsC b0700 - - rhsC protein in rhs element 732593..732814 + 73 1786918 b0701 b0701 - - protein in rhs element 732999..733325 + 108 1786919 ybfB b0702 - - orf, hypothetical protein 733443..734876 + 477 1786921 b0703 b0703 M COG3209 orf, hypothetical protein 734873..735442 + 189 1786922 ybfC b0704 - - orf, hypothetical protein 736327..737184 + 285 1786923 ybfL b0705 - - putative receptor protein 737315..738076 + 253 1786924 ybfD b0706 - - putative DNA ligase 738224..738733 + 169 1786925 ybgA b0707 S COG3272 orf, hypothetical protein 738730..740148 + 472 1786926 phrB b0708 L COG0415 deoxyribodipyrimidine photolyase (photoreactivation) 740298..741779 - 493 1786927 ybgH b0709 E COG3104 putative transport protein 742050..742793 + 247 1786928 ybgI b0710 S COG0327 orf, hypothetical protein 742816..743472 + 218 1786929 ybgJ b0711 E COG2049 putative carboxylase 743466..744398 + 310 1786930 ybgK b0712 E COG1984 putative carboxylase 744388..745122 + 244 1786931 ybgL b0713 R COG1540 putative lactam utilization protein 745158..745949 + 263 1786932 nei b0714 L COG0266 endonuclease VIII and DNA N-glycosylase with an AP lyase activity 745946..747037 - 363 1786933 abrB b0715 - - putative transport protein 747144..748232 - 362 1786935 ybgO b0716 - - orf, hypothetical protein 748202..748930 - 242 1786936 ybgP b0717 - - putative chaperone 748945..751401 - 818 1786937 ybgQ b0718 - - putative outer membrane protein 751452..752018 - 188 1786938 ybgD b0719 N COG3539 putative fimbrial-like protein 752408..753691 - 427 1786939 gltA b0720 C COG0372 citrate synthase 754400..754789 + 129 1786940 sdhC b0721 C COG2009 succinate dehydrogenase, cytochrome b556 754783..755130 + 115 1786941 sdhD b0722 C COG2142 succinate dehydrogenase, hydrophobic subunit 755130..756896 + 588 1786942 sdhA b0723 C COG1053 succinate dehydrogenase, flavoprotein subunit 756912..757628 + 238 1786943 sdhB b0724 C COG0479 succinate dehydrogenase, iron sulfur protein 757687..757947 + 86 1786944 b0725 b0725 - - orf, hypothetical protein 757929..760730 + 933 1786945 sucA b0726 C COG0567 2-oxoglutarate dehydrogenase (decarboxylase component) 760745..761962 + 405 1786946 sucB b0727 C COG0508 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) 762237..763403 + 388 1786948 sucC b0728 C COG0045 succinyl-CoA synthetase, beta subunit 763403..764272 + 289 1786949 sucD b0729 C COG0074 succinyl-CoA synthetase, alpha subunit 764376..765098 - 240 1786950 farR b0730 K COG2188 transcriptional regulator of succinylCoA synthetase operon 765207..767183 + 658 1786951 hrsA b0731 G COG1299 protein modification enzyme, induction of ompC 767201..769834 + 877 1786952 ybgG b0732 G COG0383 putative sugar hydrolase 770678..772249 + 523 1786953 cydA b0733 C COG1271 cytochrome d terminal oxidase, polypeptide subunit I 772265..773404 + 379 1786954 cydB b0734 C COG1294 cytochrome d terminal oxidase polypeptide subunit II 773532..773825 + 97 1786956 ybgE b0735 - - orf, hypothetical protein 773975..774379 + 134 1786957 ybgC b0736 R COG0824 orf, hypothetical protein 774376..775068 + 230 1786958 tolQ b0737 N COG0811 inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins 775072..775500 + 142 1786959 tolR b0738 N COG0848 putative inner membrane protein, involved in the tonB-independent uptake of group A colicins 775565..776830 + 421 1786960 tolA b0739 M COG3064 membrane spanning protein, required for outer membrane integrity 776963..778255 + 430 1786961 tolB b0740 N COG0823 periplasmic protein involved in the tonb-independent uptake of group A colicins 778290..778811 + 173 1786962 pal b0741 M COG2885 peptidoglycan-associated lipoprotein 778821..779612 + 263 1786963 ybgF b0742 S COG1729 orf, hypothetical protein 781308..782351 + 347 1786964 nadA b0750 H COG0379 quinolinate synthetase, A protein 782389..783108 + 239 1786965 pnuC b0751 H COG3201 required for NMN transport 783105..784046 - 313 1786966 ybgR b0752 P COG1230 putative transport system permease protein 784160..784540 - 126 1786968 b0753 b0753 - - putative homeobox protein 784856..785908 + 350 1786969 aroG b0754 E COG0722 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible) 786066..786818 - 250 1786970 gpmA b0755 G COG0588 phosphoglyceromutase 1 787020..788060 - 346 1786971 galM b0756 G COG2017 galactose-1-epimerase (mutarotase) 788054..789202 - 382 1786972 galK b0757 G COG0153 galactokinase 789206..790252 - 348 1786973 galT b0758 C COG1085 galactose-1-phosphate uridylyltransferase 790262..791278 - 338 1786974 galE b0759 M COG1087 UDP-galactose-4-epimerase 791539..793011 - 490 1786975 modF b0760 P COG1119 ATP-binding component of molybdate transport system 793079..793867 - 262 1786976 modE b0761 R COG2005 molybdate uptake regulatory protein 793996..794145 + 49 1786977 b0762 b0762 - - orf, hypothetical protein 794312..795085 + 257 1786979 modA b0763 P COG0725 molybdate-binding periplasmic protein; permease 795085..795774 + 229 1786980 modB b0764 P COG0555 molybdate transport permease protein 795777..796835 + 352 1786981 modC b0765 P COG1118 ATP-binding component of molybdate transport 796836..797654 - 272 1786982 ybhA b0766 R COG0561 putative phosphatase 797809..798804 + 331 1786983 ybhE b0767 G COG2706 putative isomerase 798845..799861 - 338 1786984 ybhD b0768 K COG0583 putative transcriptional regulator LYSR-type 799982..801034 + 350 1786985 ybhH b0769 S COG2828 orf, hypothetical protein 801110..802543 + 477 1786986 ybhI b0770 P COG0471 putative membrane pump protein 802702..804987 + 761 1786987 ybhJ b0771 C COG1048 putative enzyme 805221..806504 - 427 1786989 ybhC b0772 - - putative pectinesterase 806656..807132 - 158 1786990 ybhB b0773 R COG1881 orf, hypothetical protein 807191..808480 - 429 1786991 bioA b0774 H COG0161 7,8-diaminopelargonic acid synthetase 808567..809607 + 346 1786992 bioB b0775 H COG0502 biotin synthesis, sulfur insertion? 809604..810758 + 384 1786993 bioF b0776 H COG0156 8-amino-7-oxononanoate synthase 810745..811500 + 251 1786994 bioC b0777 Q COG0500 biotin biosynthesis; reaction prior to pimeloyl CoA 811493..812170 + 225 1786995 bioD b0778 H COG0132 dethiobiotin synthetase 812749..814770 + 673 1786996 uvrB b0779 L COG0556 DNA repair; excision nuclease subunit B 814962..815870 - 302 1786997 ybhK b0780 S COG0391 putative structural protein 816267..817256 + 329 1786999 moaA b0781 H COG2896 molybdopterin biosynthesis, protein A 817278..817790 + 170 1787000 moaB b0782 H COG0521 molybdopterin biosynthesis, protein B 817793..818278 + 161 1787001 moaC b0783 H COG0315 molybdopterin biosynthesis, protein C 818271..818516 + 81 1787002 moaD b0784 H COG1977 molybdopterin biosynthesis 818518..818970 + 150 1787003 moaE b0785 H COG0314 molybdopterin converting factor, subunit 2 819107..819811 + 234 1787004 ybhL b0786 R COG0670 orf, hypothetical protein 820016..820729 + 237 1787005 ybhM b0787 R COG0670 orf, hypothetical protein 820765..821721 - 318 1787006 ybhN b0788 R COG0392 orf, hypothetical protein 821721..822962 - 413 1787007 ybhO b0789 I COG1502 putative synthetase 822959..823720 - 253 1787008 ybhP b0790 - - orf, hypothetical protein 823853..824263 + 136 1787009 ybhQ b0791 - - orf, hypothetical protein 824225..825331 - 368 1787010 ybhR b0792 R COG0842 orf, hypothetical protein 825342..826475 - 377 1787011 ybhS b0793 R COG0842 orf, hypothetical protein 826468..828219 - 583 1787012 ybhF b0794 Q COG1131 putative ATP-binding component of a transport system 828197..829195 - 332 1787013 b0795 b0795 Q COG0845 putative membrane protein 829195..829878 - 227 1787014 ybiH b0796 K COG1309 putative transcriptional regulator 830095..831459 + 454 1787016 rhlE b0797 L COG0513 putative ATP-dependent RNA helicase 831691..832173 - 160 1787017 ybiA b0798 S COG3236 orf, hypothetical protein 832293..834443 + 716 1787018 dinG b0799 L COG1199 probably ATP-dependent helicase 834471..835433 + 320 1787019 ybiB b0800 E COG0547 putative enzyme 835574..836659 + 361 1787020 ybiC b0801 C COG2055 putative dehydrogenase 836888..837148 - 86 1787021 ybiJ b0802 - - orf, hypothetical protein 837413..837679 - 88 1787022 ybiI b0803 T COG1734 orf, hypothetical protein 837753..838466 - 237 1787023 ybiX b0804 - - putative enzyme 838472..840754 - 760 1787024 b0805 b0805 P COG1629 putative outer membrane receptor for iron transport 841019..841423 - 134 1787026 ybiM b0806 - - orf, hypothetical protein 841474..842481 + 335 1787027 ybiN b0807 - - orf, hypothetical protein 842478..844838 - 786 1787028 ybiO b0808 M COG0668 putative transport protein 844964..845686 - 240 1787029 glnQ b0809 E COG1126 ATP-binding component of glutamine high-affinity transport system 845683..846342 - 219 1787030 glnP b0810 E COG0765 glutamine high-affinity transport system; membrane component 846481..847227 - 248 1787031 glnH b0811 E COG0834 periplasmic glutamine-binding protein; permease 847631..848134 - 167 1787032 dps b0812 L COG0783 global regulator, starvation conditions 848433..849320 - 295 1787033 ybiF b0813 G COG0697 putative transmembrane subunit 849673..850188 + 171 1787034 ompX b0814 - - outer membrane protein X 850237..851820 - 527 1787035 ybiP b0815 R COG2194 putative enzyme 851894..852163 + 89 1787037 b0816 b0816 - - orf, hypothetical protein 852406..852873 + 155 1787038 b0817 b0817 K COG1321 putative toxin 852870..853988 + 372 1787039 ybiR b0818 P COG0471 orf, hypothetical protein 854047..854967 - 306 1787040 ybiS b0819 S COG1376 orf, hypothetical protein 855186..856778 + 530 1787041 ybiT b0820 R COG0488 putative ATP-binding component of a transport system 857019..858284 - 421 1787042 ybiU b0821 - - orf, hypothetical protein 858436..859251 - 271 1787043 b0822 b0822 R COG0561 orf, hypothetical protein 859397..861829 - 810 1787044 ybiW b0823 C COG1882 putative formate acetyltransferase 861835..862761 - 308 1787045 ybiY b0824 O COG1180 putative pyruvate formate-lyase 2 activating enzyme 862793..863527 + 244 1787046 mipB b0825 G COG0176 putative transaldolase 863603..864352 - 249 1787048 moeB b0826 H COG0476 molybdopterin biosynthesis 864352..865587 - 411 1787049 moeA b0827 H COG0303 molybdopterin biosynthesis 865791..866756 + 321 1787050 ybiK b0828 E COG1446 putative asparaginase 866776..868614 + 612 1787051 b0829 b0829 R COG1123 putative ATP-binding component of a transport system 868634..870172 + 512 1787052 b0830 b0830 E COG0747 putative transport protein 870190..871110 + 306 1787053 b0831 b0831 E COG0601 putative transport system permease protein 871113..872024 + 303 1787054 b0832 b0832 E COG1173 putative transport system permease protein 872202..874550 + 782 1787055 b0833 b0833 T COG2200 orf, hypothetical protein 874558..875886 + 442 1787056 b0834 b0834 T COG2199 orf, hypothetical protein 875933..877258 - 441 1787057 yliG b0835 J COG0621 orf, hypothetical protein 877471..877854 + 127 1787059 b0836 b0836 - - putative receptor 877965..879080 + 371 1787060 yliI b0837 G COG2133 putative dehydrogenase 879077..879709 - 210 1787061 yliJ b0838 O COG0625 putative transferase 879950..881152 + 400 1787062 dacC b0839 M COG1686 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6 881199..881957 - 252 1787063 deoR b0840 K COG1349 transcriptional repressor for deo operon, tsx, nupG 882015..882611 - 198 1787064 ybjG b0841 I COG0671 orf, hypothetical protein 882896..884128 + 410 1787065 cmr b0842 G COG0477 proton motive force efflux pump 884169..884453 - 94 1787066 ybjH b0843 - - orf, hypothetical protein 884539..885327 - 262 1787067 b0844 b0844 R COG0561 orf, hypothetical protein 885354..886562 - 402 1787068 b0845 b0845 G COG0477 putative DEOR-type transcriptional regulator 886646..887182 + 178 1787069 b0846 b0846 S COG3226 putative DEOR-type transcriptional regulator 887357..889042 - 561 1787071 b0847 b0847 R COG2985 putative transport protein 889312..889689 + 125 1787072 ybjM b0848 - - orf, hypothetical protein 889719..889976 - 85 1787073 grxA b0849 O COG0695 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase 890136..890423 + 95 1787074 ybjC b0850 - - orf, hypothetical protein 890407..891129 + 240 1787075 mdaA b0851 C COG0778 modulator of drug activity A 891190..892092 + 300 1787076 rimK b0852 H COG0189 ribosomal protein S6 modification protein 892180..892656 + 158 1787077 ybjN b0853 - - putative sensory transduction regulator 893007..894119 + 370 1787078 potF b0854 E COG0687 periplasmic putrescine-binding protein; permease protein 894133..895347 + 404 1787079 potG b0855 G COG1130 ATP-binding component of putrescine transport system 895357..896310 + 317 1787080 potH b0856 E COG1176 putrescine transport protein; permease 896307..897152 + 281 1787081 potI b0857 E COG1177 putrescine transport protein; permease 897212..897700 + 162 1787082 ybjO b0858 - - orf, hypothetical protein 897741..898868 + 375 1787083 ybjF b0859 J COG2265 putative enzyme 899067..899798 - 243 1787085 artJ b0860 E COG0834 arginine 3rd transport system periplasmic binding protein 900089..900757 - 222 1787086 artM b0861 E COG0765 arginine 3rd transport system permease protein 900757..901473 - 238 1787087 artQ b0862 E COG0765 arginine 3rd transport system permease protein 901480..902211 - 243 1787088 artI b0863 E COG0834 arginine 3rd transport system periplasmic binding protein 902229..902957 - 242 1787089 artP b0864 E COG1126 ATP-binding component of 3rd arginine transport system 903175..903690 - 171 1787090 ybjP b0865 - - putative enzyme 903816..904139 + 107 1787091 b0866 b0866 S COG0393 orf, hypothetical protein 904136..904966 + 276 1787092 b0867 b0867 M COG3023 putative regulator 904963..906012 - 349 1787093 b0868 b0868 M COG0451 putative nucleotide di-P-sugar epimerase or dehydratase 906075..907535 - 486 1787094 ybjT b0869 M COG0702 putative dTDP-glucose enzyme 907516..908517 - 333 1787095 ybjU b0870 E COG2008 putative arylsulfatase 908554..910272 - 572 1787096 poxB b0871 E COG0028 pyruvate oxidase 910405..911373 - 322 1787098 b0872 b0872 C COG1018 putative enzyme 911385..913043 - 552 1787099 ybjW b0873 C COG1151 putative prismane 913181..914128 - 315 1787100 ybjE b0874 S COG2431 putative surface protein 914575..915270 - 231 1787101 aqpZ b0875 G COG0580 transmembrane water channel; aquaporin Z 915696..917354 + 552 1787102 ybjD b0876 - - orf, hypothetical protein 917351..918343 - 330 1787103 ybjX b0877 S COG2990 putative enzyme 918431..919573 + 380 1787104 b0878 b0878 Q COG0845 putative membrane protein 919570..921516 + 648 1787105 ybjZ b0879 R COG0577 putative ATP-binding component of a transport system 921589..921813 - 74 1787107 cspD b0880 K COG1278 cold shock protein 922136..922456 + 106 1787108 yljA b0881 S COG2127 orf, hypothetical protein 922487..924763 + 758 1787109 clpA b0882 O COG0542 ATP-binding component of serine protease 925448..925666 - 72 1787110 infA b0884 J COG0361 protein chain initiation factor IF-1 925951..926655 - 234 1787111 aat b0885 O COG2360 leucyl, phenylalanyl-tRNA-protein transferase 926697..928418 - 573 1787112 cydC b0886 Q COG1132 ATP-binding component of cytochrome-related transport 928419..930185 - 588 1787113 cydD b0887 Q COG1132 ATP-binding component of cytochrome-related transport, Zn sensitive 930308..931273 - 321 1787114 trxB b0888 O COG0492 thioredoxin reductase 931818..932312 + 164 1787116 lrp b0889 K COG1522 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 932447..936436 + 1329 1787117 ftsK b0890 D COG1674 cell division protein 936592..937206 + 204 1787118 lolA b0891 M COG2834 periplasmic protein effects translocation of lipoproteins from inner membrane to outer 937217..938560 + 447 1787119 ycaJ b0892 L COG2256 putative polynucleotide enzyme 938651..939943 + 430 1787120 serS b0893 J COG0172 serine tRNA synthetase; also charges selenocystein tRNA with serine 940269..942626 + 785 1787121 dmsA b0894 C COG0243 anaerobic dimethyl sulfoxide reductase subunit A 942637..943254 + 205 1787122 dmsB b0895 C COG0437 anaerobic dimethyl sulfoxide reductase subunit B 943256..944119 + 287 1787123 dmsC b0896 R COG3302 anaerobic dimethyl sulfoxide reductase subunit C 944154..944780 - 208 1787124 ycaC b0897 Q COG1335 orf, hypothetical protein 945094..946242 + 382 1787126 ycaD b0898 G COG0477 putative transport 946260..947882 + 540 1787127 b0899 b0899 E COG0531 putative transport 947883..948791 - 302 1787128 ycaN b0900 K COG0583 putative transcriptional regulator LYSR-type 948891..949481 + 196 1787129 ycaK b0901 R COG2249 orf, hypothetical protein 949563..950303 - 246 1787130 pflA b0902 O COG1180 pyruvate formate lyase activating enzyme 1 950495..952777 - 760 1787131 pflB b0903 C COG1882 formate acetyltransferase 1 952832..953689 - 285 1787132 focA b0904 P COG2116 probable formate transporter (formate channel 1) 954095..955864 - 589 1787133 ycaO b0905 S COG1944 orf, hypothetical protein 955985..956677 + 230 1787135 ycaP b0906 S COG2323 orf, hypothetical protein 956876..957964 + 362 1787136 serC b0907 H COG1932 3-phosphoserine aminotransferase 958035..959318 + 427 1787137 aroA b0908 E COG0128 5-enolpyruvylshikimate-3-phosphate synthetase 959463..960251 + 262 1787138 ycaL b0909 O COG0501 putative heat shock protein 960424..961107 + 227 1787139 cmk b0910 F COG0283 cytidylate kinase 961218..962891 + 557 1787140 rpsA b0911 J COG0539 30S ribosomal subunit protein S1 963051..963335 + 94 1787141 himD b0912 L COG0776 integration host factor (IHF), beta subunit; site-specific recombination 963465..965807 + 780 1787142 ycaI b0913 R COG2333 orf, hypothetical protein 965844..967592 + 582 1787143 msbA b0914 Q COG1132 ATP-binding transport protein; multicopy suppressor of htrB 967589..968575 + 328 1787144 ycaH b0915 N COG1663 putative EC 1.2 enzyme 968612..969844 + 410 1787145 ycaQ b0916 - - orf, hypothetical protein 969896..970078 + 60 1787146 ycaR b0917 S COG2835 orf, hypothetical protein 970075..970821 + 248 1787147 kdsB b0918 M COG1212 CTP:CMP-3-deoxy-D-manno-octulosonate transferase 970975..971868 + 297 1787149 b0919 b0919 - - orf, hypothetical protein 971845..972624 - 259 1787150 ycbC b0920 S COG1434 orf, hypothetical protein 972760..973545 + 261 1787151 smtA b0921 Q COG0500 S-adenosylmethionine-dependent methyltransferase 973542..974864 + 440 1787152 mukF b0922 D COG3006 mukF protein (killing factor KICB) 974872..975549 + 225 1787153 mukE b0923 D COG3095 orf, hypothetical protein 975549..980009 + 1486 1787154 mukB b0924 D COG3096 kinesin-like cell division protein involved in chromosome partitioning 980270..982117 + 615 1787155 ycbB b0925 S COG2989 putative amidase 982298..982846 + 182 1787157 ycbK b0926 - - orf, hypothetical protein 982873..983520 + 215 1787158 ycbL b0927 R COG0491 orf, hypothetical protein 983742..984932 - 396 1787159 aspC b0928 E COG1448 aspartate aminotransferase 985117..986205 - 362 1787160 ompF b0929 M COG3203 outer membrane protein 1a (Ia;b;F) 986808..988208 - 466 1787161 asnS b0930 J COG0017 asparagine tRNA synthetase 988377..989579 - 400 1787162 pncB b0931 H COG1488 nicotinate phosphoribosyltransferase 989845..992457 + 870 1787163 pepN b0932 E COG0308 aminopeptidase N 992500..993267 - 255 1787164 ycbE b0933 P COG1116 putative ATP-binding component of a transport system 993264..994100 - 278 1787165 ycbM b0934 P COG0600 putative transport system permease protein 994066..995211 - 381 1787166 ycbN b0935 C COG2141 orf, hypothetical protein 995208..996209 - 333 1787167 ycbO b0936 P COG0715 orf, hypothetical protein 996160..996735 - 191 1787168 ycbP b0937 - - orf, hypothetical protein 997082..997630 + 182 1787170 ycbQ b0938 - - putative fimbrial-like protein 997713..998414 + 233 1787171 ycbR b0939 - - putative chaperone 998439..1001039 + 866 1787172 ycbS b0940 - - putative outer membrane protein 1001030..1002100 + 356 1787173 b0941 b0941 N COG3539 homolog of Salmonella FimH protein 1002112..1002654 + 180 1787174 b0942 b0942 N COG3539 putative fimbrial-like protein 1002614..1003177 + 187 1787175 b0943 b0943 N COG3539 putative fimbrial-like protein 1003143..1003880 + 245 1787176 ycbF b0944 N COG3121 putative chaperone 1003991..1005001 + 336 1787177 pyrD b0945 F COG0167 dihydro-orotate dehydrogenase 1005139..1005717 + 192 1787178 ycbW b0946 - - orf, hypothetical protein 1005714..1006823 - 369 1787179 b0947 b0947 R COG3217 orf, hypothetical protein 1007067..1009175 + 702 1787181 ycbY b0948 L COG0116 putative oxidoreductase 1009187..1011094 + 635 1787182 uup b0949 R COG0488 putative ATP-binding component of a transport system 1011224..1012477 + 417 1787183 pqiA b0950 S COG2995 paraquat-inducible protein A 1012482..1014122 + 546 1787184 pqiB b0951 R COG3008 paraquat-inducible protein B 1014134..1014682 + 182 1787185 ymbA b0952 S COG3009 orf, hypothetical protein 1014938..1015105 + 55 1787186 rmf b0953 J COG3130 ribosome modulation factor 1015175..1015693 - 172 1787187 fabA b0954 I COG0764 beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase 1015762..1017522 - 586 1787188 b0955 b0955 O COG1067 putative ATP-dependent protease 1017708..1018160 + 150 1787190 ycbG b0956 S COG3120 putative dehydrogenase 1018236..1019276 - 346 1787191 ompA b0957 M COG2885 outer membrane protein 3a (II*;G;d) 1019633..1020142 - 169 1787192 sulA b0958 - - suppressor of lon; inhibits cell division and ftsZ ring formation 1020361..1020990 + 209 1787193 b0959 b0959 N COG3070 orf, hypothetical protein 1020953..1023115 - 720 1787194 b0960 b0960 S COG1289 orf, hypothetical protein 1023125..1023571 - 148 1787195 yccF b0961 S COG3304 orf, hypothetical protein 1023694..1025748 + 684 1787196 helD b0962 L COG0210 DNA helicase IV 1025780..1026247 - 155 1787197 mgsA b0963 G COG1803 methylglyoxal synthase 1026334..1026996 - 220 1787198 b0964 b0964 S COG3110 orf, hypothetical protein 1027088..1027582 + 164 1787199 b0965 b0965 R COG1832 orf, hypothetical protein 1027627..1027995 - 122 1787200 yccV b0966 - - orf, hypothetical protein 1028002..1029105 - 367 1787201 b0967 b0967 R COG1092 putative oxidoreductase 1029287..1029565 + 92 1787203 b0968 b0968 C COG1254 orf, hypothetical protein 1029562..1029948 - 128 1787204 yccK b0969 P COG2920 putative sulfite reductase (EC 1.8.-.-) 1029982..1030641 - 219 1787205 yccA b0970 R COG0670 putative carrier/transport protein 1031362..1032480 + 372 1787206 hyaA b0972 C COG1740 hydrogenase-1 small subunit 1032477..1034270 + 597 1787207 hyaB b0973 C COG0374 hydrogenase-1 large subunit 1034289..1034996 + 235 1787208 hyaC b0974 C COG1969 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit 1034993..1035580 + 195 1787209 hyaD b0975 C COG0680 processing of HyaA and HyaB proteins 1035577..1035975 + 132 1787210 hyaE b0976 - - processing of HyaA and HyaB proteins 1035972..1036829 + 285 1787211 hyaF b0977 - - nickel incorporation into hydrogenase-1 proteins 1036963..1038507 + 514 1787212 appC b0978 C COG1271 probable third cytochrome oxidase, subunit I 1038519..1039655 + 378 1787213 appB b0979 C COG1294 probable third cytochrome oxidase, subunit II 1039840..1041138 + 432 1787215 appA b0980 - - phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic 1041253..1043433 - 726 1787216 yccC b0981 N COG3206 orf, hypothetical protein 1043453..1043911 - 152 1787217 yccY b0982 T COG0394 putative phosphatase 1043887..1045026 - 379 1787218 yccZ b0983 M COG1596 putative function in exopolysaccharide production 1045072..1047168 - 698 1787219 ymcA b0984 - - orf, hypothetical protein 1047168..1047914 - 248 1787220 ymcB b0985 - - orf, hypothetical protein 1047911..1048555 - 214 1787221 ymcC b0986 - - putative regulator 1048662..1048985 - 107 1787222 ymcD b0987 - - orf, hypothetical protein 1049250..1049753 + 167 1787223 insB_4 b0988 L COG1662 IS1 protein InsB 1050186..1050398 - 70 2367112 cspH b0989 K COG1278 cold shock-like protein 1050684..1050896 + 70 2367114 cspG b0990 K COG1278 homolog of Salmonella cold shock protein 1051070..1051300 + 76 1787225 sfa b0991 - - suppresses fabA and ts growth mutation 1051512..1052585 - 357 1787226 yccM b0992 C COG0348 orf, hypothetical protein 1052657..1055371 - 904 1787227 torS b0993 T COG2198 sensor protein torS (regulator TorR) 1055484..1056512 + 342 1787228 torT b0994 G COG1879 part of regulation of tor operon, periplasmic 1056485..1057177 - 230 1787229 torR b0995 T COG0745 response transcriptional regulator for torA (sensor TorS) 1057307..1058479 + 390 1787230 torC b0996 C COG3005 trimethylamine N-oxide reductase, cytochrome c-type subunit 1058479..1061025 + 848 1787231 torA b0997 C COG0243 trimethylamine N-oxide reductase subunit 1061022..1061621 + 199 1787232 torD b0998 R COG3381 part of trimethylamine-N-oxide oxidoreductase 1061773..1062078 - 101 1787234 yccD b0999 - - orf, hypothetical protein 1062078..1062998 - 306 1787235 cbpA b1000 O COG2214 curved DNA-binding protein; functions closely related to DnaJ 1063259..1064515 + 418 1787236 yccE b1001 - - orf, hypothetical protein 1064808..1066049 + 413 1787237 agp b1002 - - periplasmic glucose-1-phosphatase 1066087..1066314 - 75 1787238 yccJ b1003 - - orf, hypothetical protein 1066335..1066931 - 198 1787239 wrbA b1004 R COG0655 trp repressor binding protein; affects association of trp repressor and operator 1067141..1067371 + 76 1787240 ycdF b1005 - - orf, hypothetical protein 1067734..1069128 - 464 1787241 ycdG b1006 F COG2233 putative transport protein 1069083..1069541 - 152 1787242 b1007 b1007 R COG1853 orf, hypothetical protein 1069588..1070178 - 196 1787243 b1008 b1008 C COG0778 putative enzyme 1070188..1070988 - 266 1787244 b1009 b1009 R COG0596 putative acetyltransferase 1070996..1071382 - 128 1787245 b1010 b1010 J COG0251 orf, hypothetical protein 1071394..1072128 - 244 1787246 b1011 b1011 Q COG1335 putative synthetase 1072086..1073234 - 382 1787247 b1012 b1012 C COG2141 orf, hypothetical protein 1073465..1074103 + 212 1787249 ycdC b1013 K COG1309 putative tet operon regulator 1074143..1078105 - 1320 1787250 putA b1014 E COG0506 proline dehydrogenase, P5C dehydrogenase 1078528..1080036 + 502 1787251 putP b1015 E COG0591 major sodium/proline symporter 1080570..1080689 + 39 1787252 b1016 b1016 - - orf, hypothetical protein 1080677..1081408 + 243 1787253 b1017 b1017 - - putative cytochrome 1081466..1082593 + 375 1787254 ycdO b1018 P COG2822 orf, hypothetical protein 1082599..1083870 + 423 1787255 ycdB b1019 P COG2837 orf, hypothetical protein 1084215..1085279 + 354 1787257 phoH b1020 T COG1702 PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation 1085329..1085742 - 137 1787258 ycdP b1021 - - orf, hypothetical protein 1085744..1087069 - 441 1787259 ycdQ b1022 M COG1215 orf, hypothetical protein 1087062..1089080 - 672 1787260 ycdR b1023 G COG0726 orf, hypothetical protein 1089089..1091512 - 807 1787261 ycdS b1024 - - putative outer membrane protein 1092099..1093457 + 452 1787262 ycdT b1025 T COG2199 orf, hypothetical protein 1093498..1094364 - 288 1787263 tra5_3 b1026 L COG2801 IS3 putative transposase 1094361..1094669 - 102 1787264 b1027 b1027 L COG2963 orf, hypothetical protein 1094746..1095069 + 107 1787266 b1028 b1028 - - orf, hypothetical protein 1095066..1096052 + 328 1787267 ycdU b1029 - - orf, hypothetical protein 1096171..1096422 + 83 1787268 b1030 b1030 - - orf, hypothetical protein 1096190..1096603 + 137 1787269 ycdV b1031 - - putative ribosomal protein 1097070..1098047 + 325 1787270 ycdW b1033 E COG0111 putative dehydrogenase 1098102..1098839 + 245 1787271 ycdX b1034 E COG1387 orf, hypothetical protein 1098863..1099417 + 184 1787272 ycdY b1035 - - putative oxidoreductase component 1099471..1100010 + 179 1787273 ycdZ b1036 - - orf, hypothetical protein 1100074..1100907 - 277 1787274 csgG b1037 M COG1462 curli production assembly/transport component, 2nd curli operon 1100934..1101350 - 138 1787275 csgF b1038 - - curli production assembly/transport component, 2nd curli operon 1101375..1101764 - 129 1787276 csgE b1039 - - curli production assembly/transport component, 2nd curli operon 1101769..1102419 - 216 1787277 csgD b1040 K COG2771 putative 2-component transcriptional regulator for 2nd curli operon 1103174..1103629 + 151 1787278 csgB b1041 - - minor curlin subunit precursor, similar ro CsgA 1103670..1104125 + 151 1787279 csgA b1042 - - curlin major subunit, coiled surface structures; cryptic 1104184..1104516 + 110 1787280 csgC b1043 - - putative curli production protein 1104637..1104948 + 103 1787281 b1044 b1044 - - orf, hypothetical protein 1105043..1105576 + 177 1787283 b1045 b1045 S COG2110 putative polyprotein 1105518..1106999 + 493 1787284 ymdC b1046 I COG1502 putative synthase 1107007..1108164 - 385 1787285 ymdD b1047 - - orf, hypothetical protein 1108558..1110093 + 511 1787286 mdoG b1048 P COG3131 periplasmic glucans biosynthesis protein 1110086..1112629 + 847 1787287 mdoH b1049 M COG2943 membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO) 1112802..1113029 + 75 1787288 yceK b1050 - - orf, hypothetical protein 1113030..1113407 - 125 1787289 msyB b1051 - - acidic protein suppresses mutants lacking function of protein export 1113434..1113532 - 32 1787290 b1052 b1052 - - orf, hypothetical protein 1113487..1114713 - 408 1787291 yceE b1053 G COG0477 putative transport protein 1114885..1115805 - 306 1787292 htrB b1054 N COG1560 heat shock protein 1116030..1117082 + 350 1787294 yceA b1055 R COG1054 orf, hypothetical protein 1117124..1117699 - 191 1787295 yceI b1056 S COG2353 orf, hypothetical protein 1117703..1118269 - 188 1787296 b1057 b1057 C COG3038 putative cytochrome 1118530..1118670 - 46 1787297 yceO b1058 - - orf, hypothetical protein 1118691..1119809 - 372 1787298 solA b1059 - - sarcosine oxidase-like protein 1119924..1120178 - 84 1787299 yceP b1060 - - orf, hypothetical protein 1120465..1120710 - 81 1787300 dinI b1061 - - damage-inducible protein I 1120784..1121830 - 348 1787301 pyrC b1062 F COG0418 dihydro-orotase 1121936..1122496 - 186 1787302 yceB b1063 - - orf, hypothetical protein 1122630..1123277 - 215 1787303 grxB b1064 O COG2999 glutaredoxin 2 1123341..1124579 - 412 1787304 yceL b1065 G COG0477 orf, hypothetical protein 1124785..1125369 + 194 1787305 rimJ b1066 J COG1670 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 1125380..1126027 + 215 1787306 yceH b1067 S COG3132 orf, hypothetical protein 1126029..1126952 + 307 1787307 mviM b1068 R COG0673 putative virulence factor 1127062..1128597 + 511 1787309 mviN b1069 R COG0728 putative virulence factor 1128637..1129053 - 138 1787310 flgN b1070 N COG3418 protein of flagellar biosynthesis 1129058..1129351 - 97 1787311 flgM b1071 K COG2747 anti-FliA (anti-sigma) factor; also known as RflB protein 1129427..1130086 - 219 1787312 flgA b1072 N COG1261 flagellar biosynthesis; assembly of basal-body periplasmic P ring 1130241..1130657 + 138 1787313 flgB b1073 N COG1815 flagellar biosynthesis, cell-proximal portion of basal-body rod 1130661..1131065 + 134 1787314 flgC b1074 N COG1558 flagellar biosynthesis, cell-proximal portion of basal-body rod 1131077..1131772 + 231 1787315 flgD b1075 N COG1843 flagellar biosynthesis, initiation of hook assembly 1131797..1133005 + 402 1787316 flgE b1076 N COG1749 flagellar biosynthesis, hook protein 1133025..1133780 + 251 1787317 flgF b1077 N COG1749 flagellar biosynthesis, cell-proximal portion of basal-body rod 1133952..1134734 + 260 1787318 flgG b1078 N COG1749 flagellar biosynthesis, cell-distal portion of basal-body rod 1134787..1135485 + 232 1787319 flgH b1079 N COG2063 flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein 1135497..1136594 + 365 1787320 flgI b1080 N COG1706 homolog of Salmonella P-ring of flagella basal body 1136594..1137535 + 313 1787321 flgJ b1081 N COG1705 flagellar biosynthesis 1137601..1139244 + 547 1787323 flgK b1082 N COG1256 flagellar biosynthesis, hook-filament junction protein 1 1139256..1140209 + 317 1787324 flgL b1083 N COG1344 flagellar biosynthesis; hook-filament junction protein 1140405..1143590 - 1061 1787325 rne b1084 J COG1530 RNase E, membrane attachment, mRNA turnover, maturation 5S RNA 1143671..1144045 + 124 1787326 b1085 b1085 - - orf, hypothetical protein 1144163..1145122 + 319 1787327 yceC b1086 J COG0564 orf, hypothetical protein 1145234..1145857 - 207 1787328 yceF b1087 D COG0424 orf, hypothetical protein 1146017..1146538 + 173 1787329 yceD b1088 R COG1399 orf, hypothetical protein 1146590..1146763 + 57 1787330 rpmF b1089 J COG0333 50S ribosomal subunit protein L32 1146874..1147914 + 346 1787331 plsX b1090 I COG0416 glycerolphosphate auxotrophy in plsB background 1147982..1148935 + 317 1787333 fabH b1091 I COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase 1148951..1149880 + 309 1787334 fabD b1092 I COG0331 malonyl-CoA-[acyl-carrier-protein] transacylase 1149893..1150627 + 244 1787335 fabG b1093 Q COG1028 3-oxoacyl-[acyl-carrier-protein] reductase 1150838..1151074 + 78 1787336 acpP b1094 I COG0236 acyl carrier protein 1151162..1152403 + 413 1787337 fabF b1095 I COG0304 3-oxoacyl-[acyl-carrier-protein] synthase II 1152523..1153332 + 269 1787338 pabC b1096 E COG0115 4-amino-4-deoxychorismate lyase 1153335..1154357 + 340 1787339 yceG b1097 R COG1559 putative thymidylate kinase (EC 2.7.4.9) 1154347..1154988 + 213 1787340 tmk b1098 F COG0125 thymidylate kinase 1154985..1155989 + 334 1787341 holB b1099 L COG0470 DNA polymerase III, delta prime subunit 1156000..1156797 + 265 1787342 ycfH b1100 L COG0084 orf, hypothetical protein 1157092..1158525 + 477 1787343 ptsG b1101 G COG1264 PTS system, glucose-specific IIBC component 1158585..1160774 - 729 1787344 fhuE b1102 P COG1629 outer membrane receptor for ferric iron uptake 1161108..1161467 + 119 1787346 ycfF b1103 F COG0537 orf, hypothetical protein 1161470..1161847 + 125 1787347 ycfL b1104 - - orf, hypothetical protein 1161861..1162502 + 213 1787348 ycfM b1105 - - orf, hypothetical protein 1162483..1163307 + 274 1787349 ycfN b1106 M COG0510 putative beta-glucosidase (EC 3.2.1.21) 1163318..1164343 + 341 1787350 ycfO b1107 G COG1472 orf, hypothetical protein 1164309..1164908 + 199 1787351 ycfP b1108 - - orf, hypothetical protein 1165308..1166612 + 434 1787352 ndh b1109 C COG1252 respiratory NADH dehydrogenase 1166822..1167361 + 179 1787353 ycfJ b1110 S COG3134 orf, hypothetical protein 1167423..1168133 - 236 1787354 ycfQ b1111 K COG1309 orf, hypothetical protein 1168296..1168553 + 85 1787355 ycfR b1112 - - orf, hypothetical protein 1168635..1169597 - 320 1787356 ycfS b1113 S COG1376 orf, hypothetical protein 1169741..1173187 - 1148 1787357 mfd b1114 L COG1197 transcription-repair coupling factor; mutation frequency decline 1173315..1174388 - 357 1787359 ycfT b1115 - - orf, hypothetical protein 1174650..1175849 + 399 1787360 ycfU b1116 - - orf, hypothetical protein 1175857..1176543 + 228 1787361 ycfV b1117 - - putative ATP-binding component of a transport system 1176543..1177787 + 414 1787362 ycfW b1118 - - putative kinase 1177816..1178727 + 303 1787363 ycfX b1119 K COG1940 putative NAGC-like transcriptional regulator 1178743..1179582 + 279 1787364 cobB b1120 H COG0846 putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase 1179702..1180490 - 262 1787365 b1121 b1121 - - homolog of virulence factor 1180487..1180957 - 156 1787366 ymfA b1122 - - orf, hypothetical protein 1181006..1182052 - 348 1787367 potD b1123 E COG0687 spermidine/putrescine periplasmic transport protein 1182049..1182843 - 264 1787368 potC b1124 E COG1177 spermidine/putrescine transport system permease 1182840..1183667 - 275 1787369 potB b1125 E COG1176 spermidine/putrescine transport system permease 1183681..1184817 - 378 1787370 potA b1126 G COG1130 ATP-binding component of spermidine/putrescine transport 1185067..1186293 + 408 1787372 pepT b1127 E COG2195 putative peptidase T 1186342..1187472 - 376 1787373 ycfD b1128 S COG2850 orf, hypothetical protein 1187539..1188999 - 486 1787374 phoQ b1129 T COG0642 sensor protein PhoQ 1188999..1189670 - 223 1787375 phoP b1130 T COG0745 transcriptional regulatory protein 1189839..1191209 - 456 1787376 purB b1131 F COG0015 adenylosuccinate lyase 1191213..1191854 - 213 1787377 ycfC b1132 R COG2915 orf, hypothetical protein 1191890..1193041 - 383 1787378 ycfB b1133 J COG0482 orf, hypothetical protein 1193050..1193511 - 153 1787379 b1134 b1134 L COG0494 putative phosphohydrolase 1193521..1194144 - 207 1787380 ymfC b1135 J COG1187 orf, hypothetical protein 1194346..1195596 + 416 1787381 icdA b1136 C COG0538 isocitrate dehydrogenase, specific for NADP+ 1196090..1196755 - 221 1787383 ymfD b1137 Q COG0500 orf, hypothetical protein 1196756..1197460 - 234 1787384 ymfE b1138 - - orf, hypothetical protein 1197918..1198811 + 297 1787385 lit b1139 - - phage T4 late gene expression; at locus of e14 element 1198902..1200029 - 375 1787386 intE b1140 - - prophage e14 integrase 1200010..1200255 - 81 1787387 b1141 b1141 - - orf, hypothetical protein 1200292..1200603 - 103 1787388 ymfH b1142 - - orf, hypothetical protein 1200675..1201061 + 128 1787389 ymfI b1143 - - orf, hypothetical protein 1200999..1201283 - 94 1787390 ymfJ b1144 - - orf, hypothetical protein 1201482..1202156 - 224 1787391 b1145 b1145 K COG1974 putative phage repressor 1201944..1202447 + 167 1787392 b1146 b1146 - - orf, hypothetical protein 1202479..1203048 + 189 1787393 ymfL b1147 - - orf, hypothetical protein 1203045..1203383 + 112 1787394 ymfM b1148 - - orf, hypothetical protein 1203393..1204760 + 455 1787395 ymfN b1149 - - orf, hypothetical protein 1204772..1204954 + 60 1787396 ymfR b1150 - - orf, hypothetical protein 1204954..1205427 + 157 1787397 ymfO b1151 - - orf, hypothetical protein 1205354..1206145 + 263 1787398 b1152 b1152 S COG3299 orf, hypothetical protein 1206136..1206720 + 194 1787399 b1153 b1153 - - orf, hypothetical protein 1206724..1207353 + 209 1787400 ycfK b1154 - - orf, hypothetical protein 1207355..1207768 + 137 1787401 b1155 b1155 - - orf, hypothetical protein 1207740..1208342 - 200 1787402 ycfA b1156 - - orf, hypothetical protein 1208342..1208881 - 179 1787403 b1157 b1157 - - putative tail fiber protein 1208908..1209462 + 184 1787404 pin b1158 L COG1961 inversion of adjacent DNA; at locus of e14 element 1209569..1210402 + 277 1787406 mcrA b1159 L COG1403 restriction of DNA at 5-methylcytosine residues; at locus of e14 element 1210903..1211226 - 107 1787407 ycgW b1160 - - orf, hypothetical protein 1211926..1212330 - 134 1787408 ycgX b1161 - - orf, hypothetical protein 1212551..1213282 - 243 1787409 ycgE b1162 K COG0789 putative transcriptional regulator 1213487..1214698 - 403 1787410 b1163 b1163 T COG2200 orf, hypothetical protein 1215012..1215248 + 78 1787411 ycgZ b1164 - - orf, hypothetical protein 1215291..1215563 + 90 1787412 ymgA b1165 - - orf, hypothetical protein 1215592..1215858 + 88 1787413 ymgB b1166 - - orf, hypothetical protein 1215971..1216219 + 82 1787414 ymgC b1167 - - orf, hypothetical protein 1216509..1218074 + 521 1787415 b1168 b1168 T COG2200 putative proteases 1218824..1220344 + 506 1787416 b1169 b1169 - - putative ATP-binding component of a transport system 1220429..1221445 + 338 1787418 b1170 b1170 M COG3468 putative part of putative ATP-binding component of a transport system 1221528..1221863 - 111 1787419 b1171 b1171 - - orf, hypothetical protein 1221867..1222151 - 94 1787420 b1172 b1172 - - orf, hypothetical protein 1222918..1223130 + 70 1787421 b1173 b1173 - - orf, hypothetical protein 1223502..1223768 - 88 1787422 minE b1174 D COG0851 cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation 1223772..1224584 - 270 1787423 minD b1175 D COG2894 cell division inhibitor, a membrane ATPase, activates minC 1224608..1225303 - 231 1787424 minC b1176 D COG0850 cell division inhibitor, inhibits ftsZ ring formation 1225823..1226191 + 122 1787425 ycgJ b1177 - - orf, hypothetical protein 1226294..1226695 - 133 1787426 ycgK b1178 - - orf, hypothetical protein 1226904..1227230 + 108 1787427 ycgL b1179 S COG3100 orf, hypothetical protein 1227302..1227961 + 219 1787428 b1180 b1180 Q COG0179 putative isomerase 1228023..1228499 + 158 1787429 ycgN b1181 S COG2983 orf, hypothetical protein 1228706..1229623 - 305 1787430 hlyE b1182 - - hemolysin E 1229990..1230409 + 139 1787431 umuD b1183 K COG1974 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC 1230409..1231677 + 422 1787432 umuC b1184 L COG0389 SOS mutagenesis and repair 1231723..1232253 - 176 1787433 dsbB b1185 O COG1495 reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. 1232399..1233940 - 513 1787435 nhaB b1186 P COG3067 Na+/H+ antiporter, pH independent 1234161..1234880 + 239 1787436 fadR b1187 K COG2186 negative regulator for fad regulon, and positive activator of fabA 1234932..1236464 - 510 1787437 ycgB b1188 S COG2719 putative sporulation protein 1236794..1238092 + 432 1787438 dadA b1189 E COG0665 D-amino acid dehydrogenase subunit 1238102..1239172 + 356 1787439 dadX b1190 M COG0787 alanine racemase 2, catabolic 1239558..1241168 - 536 1787440 b1191 b1191 S COG3263 orf, hypothetical protein 1241389..1242303 - 304 1787441 b1192 b1192 S COG1619 orf, hypothetical protein 1242289..1243014 + 241 1787442 mltE b1193 M COG0741 murein transglycosylase E 1243016..1243750 - 244 1787443 ycgR b1194 - - orf, hypothetical protein 1243951..1244205 + 84 1787445 ymgE b1195 S COG2261 orf, hypothetical protein 1244383..1244823 + 146 1787446 ycgY b1196 - - orf, hypothetical protein 1244902..1246599 - 565 1787447 treA b1197 G COG1626 trehalase, periplasmic 1246919..1248340 - 473 1787448 ycgC b1198 G COG1925 putative PTS system enzyme I 1248348..1248980 - 210 1787449 b1199 b1199 G COG2376 putative dihydroxyacetone kinase (EC 2.7.1.2) 1248991..1250091 - 366 1787450 b1200 b1200 G COG2376 putative dihydroxyacetone kinase (EC 2.7.1.2) 1250280..1252208 + 642 1787451 b1201 b1201 Q COG3284 putative sensor-type regulator 1252308..1255175 - 955 1787452 b1202 b1202 - - putative adhesion and penetration protein 1255944..1257035 - 363 1787454 ychF b1203 R COG0012 putative GTP-binding protein 1257152..1257736 - 194 1787455 pth b1204 J COG0193 peptidyl-tRNA hydrolase 1258014..1258292 + 92 1787456 ychH b1205 - - orf, hypothetical protein 1258347..1259999 - 550 1787457 ychM b1206 P COG0659 orf, hypothetical protein 1260151..1261098 - 315 1787458 prsA b1207 F COG0462 phosphoribosylpyrophosphate synthetase 1261249..1262100 - 283 1787459 ychB b1208 I COG1947 orf, hypothetical protein 1262100..1262723 - 207 1787460 hemM b1209 M COG3017 an enzyme in main pathway of synthesis of 5-aminolevulinate, possibly glutamyl-tRNA dehydrogenase 1262937..1264193 + 418 1787461 hemA b1210 H COG0373 enzyme in alternate path of synthesis of 5-aminolevulinate 1264235..1265317 + 360 1787462 prfA b1211 J COG0216 peptide chain release factor RF-1 1265317..1266150 + 277 1787463 hemK b1212 J COG2890 possible protoporphyrinogen oxidase 1266147..1266539 + 130 1787464 b1213 b1213 S COG3094 orf, hypothetical protein 1266543..1267352 + 269 1787465 ychA b1214 S COG2912 orf, hypothetical protein 1267388..1268242 + 284 1787466 kdsA b1215 M COG2877 2-dehydro-3-deoxyphosphooctulonate aldolase 1269972..1271072 - 366 1787468 chaA b1216 P COG0387 sodium-calcium/proton antiporter 1271342..1271572 + 76 1787469 chaB b1217 - - cation transport regulator 1271709..1272425 + 238 1787470 chaC b1218 - - cation transport regulator 1272469..1272822 - 117 1787471 ychN b1219 P COG1553 orf, hypothetical protein 1273148..1274401 + 417 1787472 ychP b1220 - - putative factor 1274402..1275052 - 216 1787473 narL b1221 T COG2197 pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes 1275045..1276841 - 598 1787474 narX b1222 T COG0642 nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator 1277180..1278571 + 463 1787475 narK b1223 P COG2223 nitrite extrusion protein 1279087..1282830 + 1247 1787477 narG b1224 C COG0243 nitrate reductase 1, alpha subunit 1282827..1284365 + 512 1787478 narH b1225 P COG1140 nitrate reductase 1, beta subunit 1284362..1285072 + 236 1787479 narJ b1226 C COG2180 nitrate reductase 1, delta subunit, assembly function 1285072..1285749 + 225 1787480 narI b1227 C COG2181 nitrate reductase 1, cytochrome b(NR), gamma subunit 1285932..1286207 + 91 1787481 b1228 b1228 - - orf, hypothetical protein 1286310..1286411 - 33 1787482 tpr b1229 - - a protaminelike protein 1287005..1287847 - 280 1787483 purU b1232 F COG0788 formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis 1287897..1288355 - 152 1787484 ychJ b1233 S COG3012 orf, hypothetical protein 1288429..1289373 + 314 1787485 ychK b1234 R COG1752 orf, hypothetical protein 1289465..1290478 + 337 1787487 hnr b1235 T COG0784 Hnr protein 1290680..1291588 + 302 1787488 galU b1236 M COG1210 glucose-1-phosphate uridylyltransferase 1291732..1292145 - 137 1787489 hns b1237 R COG2916 DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator 1292750..1293367 + 205 1787490 tdk b1238 F COG1435 thymidine kinase 1293649..1294239 - 196 1787491 ychG b1239 - - orf, hypothetical protein 1294191..1294421 - 76 1787492 b1240 b1240 - - orf, hypothetical protein 1294669..1297344 - 891 1787493 adhE b1241 C COG1012 CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase 1297821..1298468 + 215 1787494 ychE b1242 S COG2095 putative channel protein 1299206..1300837 + 543 1787495 oppA b1243 E COG0747 oligopeptide transport; periplasmic binding protein 1300923..1301843 + 306 1787497 oppB b1244 E COG0601 oligopeptide transport permease protein 1301858..1302766 + 302 1787498 oppC b1245 E COG1173 homolog of Salmonella oligopeptide transport permease protein 1302778..1303791 + 337 1787499 oppD b1246 E COG0444 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system 1303788..1304792 + 334 1787500 oppF b1247 E COG1124 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system 1304845..1305252 - 135 1787501 b1248 b1248 S COG3099 orf, hypothetical protein 1305209..1306669 - 486 1787502 cls b1249 I COG1502 cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity 1307040..1308293 - 417 1787503 kch b1250 P COG1226 putative potassium channel protein 1308593..1308985 - 130 1787504 yciI b1251 S COG2350 orf, hypothetical protein 1309113..1309832 + 239 1787505 tonB b1252 M COG0810 energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins 1309872..1310270 - 132 1787506 yciA b1253 I COG1607 orf, hypothetical protein 1310375..1310914 - 179 1787507 yciB b1254 D COG2917 orf, hypothetical protein 1310944..1311687 - 247 1787508 yciC b1255 - - orf, hypothetical protein 1312044..1312682 + 212 1787510 yciD b1256 M COG3047 putative outer membrane protein 1312742..1313248 - 168 1787511 yciE b1257 - - orf, hypothetical protein 1313294..1313794 - 166 1787512 yciF b1258 - - putative structural proteins 1313880..1314116 - 78 1787513 yciG b1259 - - orf, hypothetical protein 1314440..1315246 - 268 1787514 trpA b1260 E COG0159 tryptophan synthase, alpha protein 1315246..1316439 - 397 1787515 trpB b1261 E COG0133 tryptophan synthase, beta protein 1316451..1317812 - 453 1787516 trpC b1262 E COG0134 N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase 1317813..1319408 - 531 1787517 trpD b1263 E COG0512 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase 1319408..1320970 - 520 1787518 trpE b1264 E COG0147 anthranilate synthase component I 1321062..1321106 - 14 1787519 trpL b1265 - - trp operon leader peptide 1321244..1322125 + 293 1787520 yciV b1266 R COG0613 putative enzymes 1322086..1322742 + 218 1787521 yciO b1267 J COG0009 orf, hypothetical protein 1322770..1324665 + 631 1787522 yciQ b1268 - - orf, hypothetical protein 1324876..1325751 + 291 1787524 yciL b1269 J COG1187 orf, hypothetical protein 1325791..1326381 - 196 1787525 btuR b1270 H COG2109 cob(I)alamin adenolsyltransferase 1326378..1327136 - 252 1787526 yciK b1271 Q COG1028 putative oxidoreductase 1327356..1328405 + 349 1787527 sohB b1272 N COG0616 putative protease 1328441..1328692 - 83 1787528 yciN b1273 - - orf, hypothetical protein 1329072..1331669 + 865 1787529 topA b1274 L COG0550 DNA topoisomerase type I, omega protein 1331879..1332853 + 324 1787530 cysB b1275 K COG0583 positive transcriptional regulator for cysteine regulon 1333855..1336530 + 891 1787531 acnA b1276 C COG1048 aconitate hydrase 1 1336594..1337184 - 196 1787533 ribA b1277 H COG0807 GTP cyclohydrolase II 1337354..1338118 + 254 1787534 pgpB b1278 I COG0671 non-essential phosphatidylglycerophosphate phosphatase, membrane bound 1338267..1338575 + 102 1787535 yciS b1279 - - orf, hypothetical protein 1338582..1339751 + 389 2367116 yciM b1280 G COG2956 putative heat shock protein 1339945..1340682 + 245 1787537 pyrF b1281 F COG0284 orotidine-5'-phosphate decarboxylase 1340679..1341008 + 109 1787538 yciH b1282 J COG0023 orf, hypothetical protein 1341134..1341352 - 72 1787539 osmB b1283 - - osmotically inducible lipoprotein 1341621..1342370 - 249 1787540 b1284 b1284 K COG1349 putative DEOR-type transcriptional regulator 1342781..1344766 - 661 1787541 yciR b1285 T COG2202 orf, hypothetical protein 1345002..1346936 - 644 1787542 rnb b1286 K COG0557 RNase II, mRNA degradation 1347004..1348209 - 401 1787544 yciW b1287 - - putative oxidoreductase 1348275..1349063 - 262 1787545 fabI b1288 I COG0623 enoyl-[acyl-carrier-protein] reductase (NADH) 1349431..1349784 - 117 1787546 ycjD b1289 S COG2852 orf, hypothetical protein 1349852..1350658 - 268 1787547 sapF b1290 E COG1124 putative ATP-binding protein of peptide transport system 1350660..1351652 - 330 1787548 sapD b1291 E COG0444 putative ATP-binding protein of peptide transport system 1351652..1352542 - 296 1787549 sapC b1292 E COG1173 homolog of Salmonella peptide transport permease protein 1352529..1353494 - 321 1787550 sapB b1293 E COG0601 homolog of Salmonella peptide transport permease protein 1353491..1355134 - 547 1787551 sapA b1294 E COG0747 homolog of Salmonella peptide transport periplasmic protein 1355447..1355692 - 81 1787552 ymjA b1295 - - orf, hypothetical protein 1355826..1357265 - 479 1787553 ycjJ b1296 E COG0531 putative amino acid/amine transport protein 1357514..1359010 - 498 1787555 b1297 b1297 E COG0174 putative glutamine synthetase (EC 6.3.1.2) 1359132..1359908 + 258 1787556 ycjL b1298 R COG2071 probable amidotransferase subunit 1359935..1360492 + 185 1787557 ycjC b1299 K COG1396 orf, hypothetical protein 1360767..1362254 + 495 1787558 aldH b1300 C COG1012 aldehyde dehydrogenase, prefers NADP over NAD 1362256..1363536 + 426 1787559 ordL b1301 E COG0665 probable oxidoreductase 1363574..1364839 + 421 1787560 goaG b1302 E COG0160 4-aminobutyrate aminotransferase 1364959..1365951 - 330 1787561 pspF b1303 O COG1221 psp operon transcriptional activator 1366103..1366771 + 222 2367118 pspA b1304 I COG1842 phage shock protein, inner membrane protein 1366825..1367049 + 74 1787563 pspB b1305 - - phage shock protein 1367049..1367408 + 119 1787564 pspC b1306 K COG1983 phage shock protein: activates phage shock-protein expression 1367417..1367638 + 73 1787565 pspD b1307 - - phage shock protein 1367713..1368027 + 104 1787567 pspE b1308 P COG0607 phage shock protein 1368213..1369919 + 568 1787568 ycjM b1309 G COG0366 putative polysaccharide hydrolase 1369933..1371225 + 430 1787569 b1310 b1310 G COG1653 putative transport periplasmic protein 1371246..1372127 + 293 1787570 ycjO b1311 G COG1175 putative binding-protein dependent transport protein 1372114..1372956 + 280 1787571 ycjP b1312 G COG0395 putative transport system permease protein 1372987..1374039 + 350 1787572 ycjQ b1313 E COG1063 putative oxidoreductase 1374049..1374846 + 265 1787573 b1314 b1314 G COG1082 putative transient receptor potential locus 1374856..1375911 + 351 1787574 ycjS b1315 R COG0673 putative dehydrogenase 1375908..1378175 + 755 1787575 ycjT b1316 G COG1554 orf, hypothetical protein 1378172..1378831 + 219 1787576 ycjU b1317 R COG0637 putative beta-phosphoglucomutase 1378845..1379813 + 322 1787577 ycjV b1318 G COG1130 putative ATP-binding component of a transport system 1379971..1380876 + 301 1787579 ompG b1319 - - outer membrane protein 1380987..1381985 - 332 1787580 ycjW b1320 K COG1609 putative LACI-type transcriptional regulator 1382141..1383538 + 465 1787581 ycjX b1321 - - putative EC 2.1 enzymes 1383535..1384596 + 353 1787582 ycjF b1322 - - orf, hypothetical protein 1384744..1386285 + 513 1787583 tyrR b1323 K COG3283 transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport 1386329..1386835 - 168 1787584 tpx b1324 O COG2077 thiol peroxidase 1386912..1387919 + 335 1787585 ycjG b1325 H COG1441 putative muconate cycloisomerase I (EC 5.5.-.-) 1387894..1388682 - 262 1787586 ycjI b1326 E COG2866 putative carboxypeptidase 1388957..1389889 - 310 1787587 b1327 b1327 R COG1073 orf, hypothetical protein 1390015..1390914 + 299 1787589 ycjZ b1328 K COG0583 putative transcriptional regulator LYSR-type 1391230..1392864 + 544 1787590 b1329 b1329 E COG0747 putative transport periplasmic protein 1392915..1393946 - 343 1787591 b1330 b1330 M COG0668 orf, hypothetical protein 1394100..1395116 + 338 1787592 trs5_4 b1331 L COG3039 IS5 transposase 1395389..1395646 + 85 1787593 ynaJ b1332 - - orf, hypothetical protein 1395696..1396646 - 316 1787594 ydaA b1333 T COG0589 orf, hypothetical protein 1396798..1397550 - 250 1787595 fnr b1334 T COG0664 transcriptional regulation of aerobic, anaerobic respiration, osmotic balance 1397745..1398260 - 171 1787596 ogt b1335 L COG0350 O-6-alkylguanine-DNA/cysteine-protein methyltransferase 1398271..1399803 - 510 1787597 ydaH b1336 H COG2978 putative pump protein (transport) 1399834..1401279 - 481 1787598 b1337 b1337 R COG1473 orf, hypothetical protein 1401279..1402604 - 441 1787599 ydaJ b1338 R COG1473 putative aminohydrolase (EC 3.5.1.14) 1402765..1403673 + 302 1787601 ydaK b1339 K COG0583 putative transcriptional regulator LYSR-type 1404003..1404566 + 187 1787602 ydaL b1340 S COG2840 orf, hypothetical protein 1404587..1405879 - 430 1787603 b1341 b1341 T COG2199 orf, hypothetical protein 1406074..1407057 + 327 1787604 b1342 b1342 P COG0598 orf, hypothetical protein 1407535..1408908 + 457 1787605 dbpA b1343 L COG0513 ATP-dependent RNA helicase 1409037..1409972 - 311 1787606 ydaO b1344 D COG0037 orf, hypothetical protein 1410024..1411259 - 411 1787607 b1345 b1345 L COG0582 putative transposase 1411261..1411500 - 79 1787608 ydaQ b1346 - - orf, hypothetical protein 1411555..1411764 - 69 1787609 ydaC b1347 - - orf, hypothetical protein 1411757..1411951 - 64 1787610 lar b1348 - - restriction alleviation and modification enhancement 1412008..1412817 - 269 1787611 recT b1349 - - recombinase, DNA renaturation 1412810..1415410 - 866 1787612 recE b1350 - - exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific 1415512..1415787 - 91 1787614 racC b1351 - - defective prophage rac; contains recE and oriJ 1416032..1416265 - 77 1787615 ydaD b1352 - - orf, hypothetical protein 1416572..1417183 + 203 1787616 sieB b1353 - - phage superinfection exclusion protein 1417192..1417368 + 58 1787617 b1354 b1354 - - orf, hypothetical protein 1417346..1417525 - 59 1787618 b1355 b1355 - - orf, hypothetical protein 1417789..1418265 - 158 1787619 ydaR b1356 - - orf, hypothetical protein 1418389..1418685 + 98 1787620 ydaS b1357 - - orf, hypothetical protein 1418708..1419130 + 140 1787621 ydaT b1358 - - orf, hypothetical protein 1419143..1420000 + 285 1787622 ydaU b1359 - - orf, hypothetical protein 1420007..1420753 + 248 1787623 b1360 b1360 L COG1484 putative DNA replication factor 1420725..1421336 + 203 1787624 ydaW b1361 - - orf, hypothetical protein 1421363..1421668 + 101 1787625 b1362 b1362 - - putative Rac prophage endopeptidase 1421806..1423263 + 485 1787626 trkG b1363 P COG0168 trk system potassium uptake; part of Rac prophage 1423202..1423483 + 93 1787627 b1364 b1364 - - orf, hypothetical protein 1423401..1423664 + 87 1787628 b1365 b1365 K COG1475 orf, hypothetical protein 1423645..1424004 + 119 1787629 ydaY b1366 - - orf, hypothetical protein 1424079..1424312 + 77 1787630 b1367 b1367 - - orf, hypothetical protein 1424478..1425506 + 342 1787631 b1368 b1368 - - putative alpha helix protein 1425482..1425637 + 51 1787632 b1369 b1369 - - orf, hypothetical protein 1425770..1426750 - 326 1787634 trs5_5 b1370 L COG3039 IS5 transposase 1426547..1427008 + 153 1787635 b1371 b1371 - - orf, hypothetical protein 1427067..1430435 + 1122 1787636 b1372 b1372 - - putative membrane protein 1430435..1431010 + 191 1787637 ynaC b1373 - - orf, hypothetical protein 1431108..1431698 - 196 1787638 b1374 b1374 L COG1961 putative transposon resolvase 1432015..1432281 - 88 1787639 ynaE b1375 - - orf, hypothetical protein 1433209..1433715 - 168 1787640 ynaF b1376 T COG0589 putative filament protein 1433784..1434917 - 377 1787641 b1377 b1377 M COG3203 putative outer membrane protein 1435284..1438808 - 1174 1787642 ydbK b1378 C COG1013 putative oxidoreductase, Fe-S subunit 1439345..1439767 - 140 1787644 hslJ b1379 O COG3187 heat shock protein hslJ 1439878..1440867 - 329 1787645 ldhA b1380 C COG1052 fermentative D-lactate dehydrogenase, NAD-dependent 1441075..1443714 + 879 1787646 ydbH b1381 - - orf, hypothetical protein 1443711..1443896 + 61 1787647 ynbE b1382 - - orf, hypothetical protein 1443898..1444230 + 110 1787648 ydbL b1383 - - orf, hypothetical protein 1444402..1445307 - 301 1787649 feaR b1384 K COG2207 regulatory protein for 2-phenylethylamine catabolism 1445540..1447042 + 500 1787650 feaB b1385 C COG1012 phenylacetaldehyde dehydrogenase 1447100..1449373 - 757 1787651 tynA b1386 - - copper amine oxidase (tyramine oxidase) 1449621..1451666 - 681 1787653 maoC b1387 C COG1012 putative aldehyde dehydrogenase 1451951..1452880 + 309 1787654 ydbO b1388 - - orf, hypothetical protein 1452892..1453179 + 95 1787655 ynbF b1389 - - orf, hypothetical protein 1453188..1453934 + 248 1787656 ydbP b1390 - - orf, hypothetical protein 1453943..1454446 + 167 1787657 b1391 b1391 R COG2151 orf, hypothetical protein 1454454..1455524 + 356 1787658 b1392 b1392 C COG1018 putative oxidoreductase 1455521..1456288 + 255 1787659 ydbS b1393 I COG1024 putative enzyme 1456288..1457076 + 262 1787660 b1394 b1394 I COG1024 putative enzyme 1457078..1458505 + 475 1787661 ydbU b1395 I COG1250 putative enzyme 1458495..1458917 + 140 1787662 b1396 b1396 Q COG2050 orf, hypothetical protein 1458917..1460122 + 401 1787663 b1397 b1397 I COG0183 putative acyltransferase 1460149..1461462 + 437 1787664 b1398 b1398 H COG1541 orf, hypothetical protein 1461563..1462513 + 316 1787666 b1399 b1399 K COG3327 orf, hypothetical protein 1462495..1463085 + 196 1787667 b1400 b1400 R COG0663 putative transferase 1463416..1465974 + 852 1787668 ydbA_1 b1401 - - split orf 1465945..1466850 - 301 1787669 yi22_2 b1402 L COG2801 IS2 hypothetical protein 1466808..1467218 - 136 1787670 yi21_2 b1403 L COG2963 IS2 hypothetical protein 1467382..1468533 + 383 1787671 tra8_2 b1404 L COG2826 IS30 transposase 1468714..1472037 + 1107 1787672 ydbA_2 b1405 - - split orf 1472245..1473105 + 286 1787674 ydbC b1406 C COG0667 putative dehydrogenase 1473162..1475474 + 770 1787675 ydbD b1407 - - orf, hypothetical protein 1475639..1476250 + 203 1787676 b1408 b1408 I COG0558 probable enzyme 1476250..1477146 + 298 1787677 b1409 b1409 I COG0575 putative phosphatidate cytidiltransferase 1477162..1478919 + 585 1787678 b1410 b1410 Q COG0500 orf, hypothetical protein 1478933..1480225 + 430 1787679 ynbD b1411 T COG2453 putative enzymes 1480279..1480884 - 201 1787680 acpD b1412 I COG1182 acyl carrier protein phosphodiesterase 1481142..1484987 + 1281 1787681 hrpA b1413 L COG1643 helicase, ATP-dependent 1485259..1486059 + 266 1787683 ydcF b1414 S COG1434 orf, hypothetical protein 1486256..1487695 + 479 1787684 aldA b1415 C COG1012 aldehyde dehydrogenase, NAD-linked 1487737..1487988 - 83 1787685 gapC_2 b1416 - - glyceraldehyde-3-phosphate dehydrogenase (second fragment) 1487985..1488389 - 134 1787686 gapC_1 b1417 - - glyceraldehyde 3-phosphate dehydrogenase C, interrupted 1488890..1489456 + 188 1787687 cybB b1418 C COG3038 cytochrome b(561) 1489701..1489874 + 57 1787688 ydcA b1419 - - orf, hypothetical protein 1489986..1490153 - 55 1787689 b1420 b1420 - - orf, hypothetical protein 1490494..1492134 + 546 1787690 trg b1421 N COG0840 methyl-accepting chemotaxis protein III, ribose sensor receptor 1492172..1493236 - 354 1787691 b1422 b1422 K COG0583 putative transcriptional regulator LYSR-type 1493312..1494655 + 447 1787692 b1423 b1423 - - orf, hypothetical protein 1494880..1496535 + 551 1787693 ydcG b1424 - - putative glycoprotein 1496456..1496659 - 67 1787694 b1425 b1425 - - orf, hypothetical protein 1496732..1496899 + 55 1787696 ydcH b1426 S COG2841 orf, hypothetical protein 1496962..1497501 + 179 1787697 rimL b1427 J COG1670 acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferase 1497493..1498473 - 326 1787698 b1428 b1428 M COG1044 orf, hypothetical protein 1498597..1499589 + 330 1787699 tehA b1429 P COG1275 tellurite resistance 1499586..1500179 + 197 1787700 tehB b1430 Q COG0500 tellurite resistance 1500481..1501149 + 222 1787701 b1431 b1431 - - orf, hypothetical protein 1501681..1502889 + 402 1787702 b1432 b1432 L COG0675 putative virulence protein 1502929..1504365 - 478 1787703 b1433 b1433 Q COG3135 putative membrane transport protein 1504196..1504732 + 178 1787704 ydcN b1434 K COG1396 orf, hypothetical protein 1504763..1506766 + 667 1787705 ydcP b1435 O COG0826 putative collagenase 1506858..1507088 - 76 1787707 b1436 b1436 - - orf, hypothetical protein 1507274..1507471 - 65 1787708 b1437 b1437 - - orf, hypothetical protein 1507511..1507948 + 145 1787709 b1438 b1438 S COG1598 orf, hypothetical protein 1508027..1509433 + 468 1787710 b1439 b1439 K COG1167 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system 1509678..1510823 + 381 1787711 b1440 b1440 E COG0687 putative transport protein 1510841..1511854 + 337 1787712 b1441 b1441 G COG1130 putative ATP-binding component of a transport system 1511855..1512796 + 313 1787713 b1442 b1442 E COG1176 putative transport system permease protein 1512786..1513580 + 264 1787714 b1443 b1443 E COG1177 putative transport system permease protein 1513602..1515026 + 474 1787715 b1444 b1444 C COG1012 putative aldehyde dehydrogenase 1515338..1515586 + 82 1787716 b1445 b1445 - - orf, hypothetical protein 1515672..1515905 + 77 1787717 b1446 b1446 - - orf, hypothetical protein 1515906..1516355 - 149 1787718 b1447 b1447 S COG3238 orf, hypothetical protein 1516352..1516870 - 172 1787719 b1448 b1448 M COG1247 putative resistance protein 1516958..1518088 + 376 1787721 yncB b1449 R COG2130 putative oxidoreductase 1518229..1518951 + 240 1787722 b1450 b1450 K COG1802 orf, hypothetical protein 1518987..1521089 - 700 1787723 b1451 b1451 P COG1629 putative outer membrane receptor for iron transport 1521331..1522392 + 353 1787724 b1452 b1452 - - putative receptor 1522505..1524055 - 516 1787725 ansP b1453 E COG1113 L-asparagine permease 1524271..1524888 + 205 1787726 b1454 b1454 O COG0625 putative transferase 1524964..1525176 + 70 1787727 b1455 b1455 - - orf, hypothetical protein 1525914..1527962 + 682 1787728 rhsE b1456 M COG3209 rhsE protein in rhs element 1527946..1528428 + 160 1787729 ydcD b1457 - - orf, hypothetical protein 1528610..1529356 + 248 1787731 b1458 b1458 - - orf, hypothetical protein 1529400..1529600 + 66 1787732 b1459 b1459 - - orf, hypothetical protein 1529840..1530976 + 378 1787733 ydcC b1460 - - putative receptor 1531076..1531309 + 77 1787734 ydcE b1461 R COG1942 orf, hypothetical protein 1531306..1531923 - 205 1787735 b1462 b1462 R COG1853 orf, hypothetical protein 1532048..1532893 + 281 1787736 b1463 b1463 Q COG2162 putative N-hydroxyarylamine O-acetyltransferase 1532989..1533882 - 297 1787737 yddE b1464 R COG0384 orf, hypothetical protein 1533961..1534641 - 226 1787738 narV b1465 C COG2181 cryptic nitrate reductase 2, gamma subunit 1534638..1535333 - 231 1787739 narW b1466 C COG2180 cryptic nitrate reductase 2, delta subunit, assembly function 1535333..1536877 - 514 1787740 narY b1467 P COG1140 cryptic nitrate reductase 2, beta subunit 1536874..1540614 - 1246 1787741 narZ b1468 C COG0243 cryptic nitrate reductase 2, alpha subunit 1540696..1542084 - 462 1787743 narU b1469 P COG2223 nitrite extrusion protein 2 1542408..1542743 - 111 1787744 b1470 b1470 - - orf, hypothetical protein 1542782..1543738 - 318 1787745 b1471 b1471 - - putative glycoportein 1543762..1544052 - 96 1787746 b1472 b1472 M COG3203 putative outer membrane porin protein 1544312..1545193 - 293 1787747 yddG b1473 G COG0697 orf, hypothetical protein 1545425..1548472 + 1015 3868719 fdnG b1474 C COG0243 formate dehydrogenase-N, nitrate-inducible, alpha subunit 1548485..1549369 + 294 1787749 fdnH b1475 C COG0437 formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit 1549362..1550015 + 217 1787750 fdnI b1476 C COG2864 formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit 1550422..1550784 - 120 1787751 yddM b1477 R COG3093 orf, hypothetical protein 1550852..1551892 - 346 1787753 adhP b1478 R COG1064 alcohol dehydrogenase 1551996..1553720 - 574 1787754 sfcA b1479 C COG0281 NAD-linked malate dehydrogenase (malic enzyme) 1553850..1553987 - 45 1787755 rpsV b1480 - - 30S ribosomal subunit protein S22 1554089..1554367 - 92 1787756 b1481 b1481 - - orf, hypothetical protein 1554649..1555080 + 143 1787757 osmC b1482 O COG1764 osmotically inducible protein 1555136..1556062 - 308 1787758 b1483 b1483 E COG1124 putative ATP-binding component of a transport system 1556055..1557041 - 328 1787759 b1484 b1484 E COG0444 putative ATP-binding component of a transport system 1557038..1557934 - 298 1787760 b1485 b1485 E COG1173 putative transport protein 1557931..1558953 - 340 1787761 b1486 b1486 E COG0601 putative transport system permease protein 1558955..1560505 - 516 1787762 b1487 b1487 E COG0747 putative hemin-binding lipoprotein 1560519..1561100 - 193 1787763 b1488 b1488 M COG2173 orf, hypothetical protein 1561358..1563781 - 807 1787765 b1489 b1489 T COG2199 putative enzyme 1563782..1565164 - 460 1787766 b1490 b1490 T COG2199 orf, hypothetical protein 1565528..1566847 - 439 1787767 b1491 b1491 S COG1649 orf, hypothetical protein 1566978..1568513 - 511 1787768 xasA b1492 E COG0531 acid sensitivity protein, putative transporter 1568669..1570069 - 466 1787769 gadB b1493 E COG0076 glutamate decarboxylase isozyme 1570431..1573226 - 931 1787770 pqqL b1494 R COG0612 putative peptidase 1573271..1575643 - 790 1787771 yddB b1495 - - orf, hypothetical protein 1575681..1577366 - 561 1787772 yddA b1496 I COG1133 putative ATP-binding component of a transport system 1577657..1578829 - 390 1787774 b1497 b1497 R COG0641 putative enzyme 1578866..1580581 - 571 1787775 b1498 b1498 P COG3119 putative sulfatase 1580950..1581711 - 253 1787776 b1499 b1499 K COG2207 putative ARAC-type regulatory protein 1581786..1581983 - 65 1787777 b1500 b1500 - - orf, hypothetical protein 1582231..1584510 - 759 1787778 b1501 b1501 C COG0243 putative oxidoreductase, major subunit 1584844..1585758 - 304 1787779 b1502 b1502 - - putative adhesin; similar to FimH protein 1585817..1586320 - 167 1787780 b1503 b1503 N COG3539 putative fimbrial-like protein 1586333..1586863 - 176 1787781 b1504 b1504 N COG3539 putative fimbrial-like protein 1586877..1588025 - 382 1787782 b1505 b1505 N COG3188 putative outer membrane protein 1588381..1588560 - 59 1787784 b1506 b1506 K COG2207 orf, hypothetical protein 1588878..1590200 - 440 1787785 hipA b1507 R COG3550 persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator 1590200..1590466 - 88 1787786 hipB b1508 K COG1396 persistence to inhibition of murein or DNA biosynthesis; regulatory protein 1590689..1592089 - 466 1787787 b1509 b1509 M COG3468 putative ATP-binding component of a transport system and adhesin protein 1592133..1596110 - 1325 1787788 ydeK b1510 - - orf, hypothetical protein 1596641..1598233 - 530 1787789 ydeV b1511 G COG1070 putative kinase 1598312..1599265 - 317 1787791 ydeW b1512 K COG2390 putative transcriptional regulator, sorC family 1599514..1601049 + 511 1787792 b1513 b1513 G COG1129 putative ATP-binding component of a transport system 1601043..1602071 + 342 1787793 ydeY b1514 G COG1172 putative transport system permease protein 1602071..1603063 + 330 1787794 ydeZ b1515 G COG1172 putative transport system permease protein 1603075..1604097 + 340 1787795 b1516 b1516 G COG1879 putative LACI-type transcriptional regulator 1604124..1604999 + 291 1787796 yneB b1517 G COG1830 orf, hypothetical protein 1605023..1605313 + 96 1787797 b1518 b1518 S COG1359 orf, hypothetical protein 1605370..1606128 + 252 1787798 b1519 b1519 Q COG0500 putative enzyme 1606132..1607097 - 321 1787799 b1520 b1520 - - orf, hypothetical protein 1607253..1608704 - 483 1787800 uxaB b1521 G COG0246 altronate oxidoreductase 1608931..1609878 - 315 1787802 b1522 b1522 T COG2199 orf, hypothetical protein 1609990..1610349 - 119 1787803 b1523 b1523 - - orf, hypothetical protein 1610349..1611275 - 308 1787804 yneH b1524 E COG2066 putative glutaminase 1611339..1612751 - 470 1787805 b1525 b1525 C COG1012 putative aldehyde dehydrogenase 1612828..1613709 + 293 1787806 yneJ b1526 K COG0583 putative transcriptional regulator LYSR-type 1613787..1614902 + 371 1787807 b1527 b1527 - - orf, hypothetical protein 1615052..1616242 + 396 1787808 ydeA b1528 G COG2814 putative resistance / regulatory protein 1616267..1616932 - 221 1787809 ydeB b1529 S COG2095 orf, hypothetical protein 1617201..1617578 + 125 1787810 marR b1530 K COG1846 multiple antibiotic resistance protein; repressor of mar operon 1617592..1617981 + 129 1787811 marA b1531 K COG2207 multiple antibiotic resistance; transcriptional activator of defense systems 1618013..1618231 + 72 1787812 marB b1532 - - multiple antibiotic resistance protein 1618262..1619062 - 266 1787813 ydeD b1533 G COG0697 orf, hypothetical protein 1619356..1620543 + 395 1787815 ydeF b1534 G COG0477 putative transport protein 1620984..1621874 - 296 1787816 ydeH b1535 T COG2199 orf, hypothetical protein 1622129..1622521 - 130 1787817 ydeI b1536 S COG3111 orf, hypothetical protein 1622797..1623315 + 172 1787818 ydeJ b1537 R COG1546 orf, hypothetical protein 1623359..1625404 - 681 1787819 dcp b1538 E COG0339 dipeptidyl carboxypeptidase II 1625541..1626287 + 248 1787820 ydfG b1539 R COG0300 putative oxidoreductase 1626376..1627062 + 228 1787821 ydfH b1540 K COG1802 orf, hypothetical protein 1627239..1627442 + 67 1787822 b1541 b1541 - - orf, hypothetical protein 1627477..1628937 - 486 1787823 ydfI b1542 G COG0246 putative oxidoreductase 1629026..1630309 - 427 1787824 b1543 b1543 G COG0477 putative transport protein 1631063..1631329 + 88 1787826 ydfK b1544 - - orf, hypothetical protein 1631646..1632236 + 196 1787827 b1545 b1545 L COG1961 orf, hypothetical protein 1632334..1632909 - 191 2367120 ydfM b1546 - - orf, hypothetical protein 1632909..1633871 - 320 1787829 b1547 b1547 - - orf, hypothetical protein 1633822..1634391 - 189 1787830 nohA b1548 - - homolog of Qin prophage packaging protein NU1 1635056..1635481 + 141 1787831 ydfO b1549 - - orf, hypothetical protein 1635633..1635809 - 58 1787832 b1550 b1550 - - orf, hypothetical protein 1635978..1636169 - 63 1787833 b1551 b1551 - - orf, hypothetical protein 1636479..1636691 - 70 1787834 cspI b1552 K COG1278 cold shock-like protein 1637054..1637551 - 165 1787835 b1553 b1553 - - orf, hypothetical protein 1637548..1638081 - 177 1787836 b1554 b1554 - - putative lysozyme 1638078..1638389 - 103 1787837 b1555 b1555 - - orf, hypothetical protein 1638394..1638684 - 96 1787838 b1556 b1556 - - orf, hypothetical protein 1639363..1639578 - 71 1787839 cspB b1557 K COG1278 cold shock protein; may affect transcription 1639879..1640091 + 70 1787840 cspF b1558 K COG1278 cold shock protein 1640513..1641295 - 260 1787842 b1559 b1559 - - orf, hypothetical protein 1641279..1642367 - 362 1787843 b1560 b1560 - - orf, hypothetical protein 1642675..1642926 - 83 1787844 rem b1561 - - orf, hypothetical protein 1643143..1643298 - 51 1787845 relF b1562 - - polypeptide destructive to membrane potential 1643370..1643657 - 95 1787846 relE b1563 S COG2026 orf, hypothetical protein 1643657..1643896 - 79 1787847 relB b1564 L COG3077 negative regulator of translation 1643921..1644226 + 101 1787848 b1565 b1565 - - orf, hypothetical protein 1644429..1644761 + 110 1787849 flxA b1566 - - orf, hypothetical protein 1645198..1645347 - 49 1787850 b1567 b1567 - - orf, hypothetical protein 1645370..1645660 - 96 1787851 b1568 b1568 - - orf, hypothetical protein 1645644..1645874 - 76 1787852 dicC b1569 - - regulator of dicB 1645958..1646365 + 135 1787853 dicA b1570 K COG1396 regulator of dicB 1646532..1646687 + 51 1787854 ydfA b1571 - - orf, hypothetical protein 1646647..1646817 + 56 1787855 ydfB b1572 - - orf, hypothetical protein 1646847..1647065 + 72 1787856 ydfC b1573 - - orf, hypothetical protein 1647633..1647821 + 62 1787857 dicB b1575 - - inhibition of cell division 1647818..1648009 + 63 1787858 ydfD b1576 - - orf, hypothetical protein 1648102..1649022 + 306 1787859 ydfE b1577 - - orf, hypothetical protein 1648905..1649561 + 218 1787860 b1578 b1578 L COG2801 orf, hypothetical protein 1649536..1650732 + 398 1787861 b1579 b1579 L COG0582 putative transposase 1650920..1651939 - 339 1787863 rspB b1580 E COG1063 starvation sensing protein 1651951..1653165 - 404 1787864 rspA b1581 H COG1441 starvation sensing protein 1653371..1653697 - 108 1787865 b1582 b1582 S COG1742 orf, hypothetical protein 1653832..1654173 + 113 1787866 b1583 b1583 - - orf, hypothetical protein 1654208..1654768 + 186 1787867 speG b1584 J COG1670 spermidine N1-acetyltransferase 1654771..1655517 - 248 1787868 ynfC b1585 - - orf, hypothetical protein 1655547..1655894 + 115 1787869 b1586 b1586 - - orf, hypothetical protein 1656093..1658519 + 808 1787870 b1587 b1587 C COG0243 putative oxidoreductase, major subunit 1658577..1661003 + 808 1787871 b1588 b1588 C COG0243 putative oxidoreductase, major subunit 1661014..1661631 + 205 1787872 b1589 b1589 C COG0437 putative oxidoreductase, Fe-S subunit 1661633..1662487 + 284 1787873 b1590 b1590 R COG3302 putative DMSO reductase anchor subunit 1662521..1663144 + 207 1787874 b1591 b1591 R COG3381 putative oxidoreductase component 1663279..1664595 + 438 1787876 b1592 b1592 P COG0038 putative chloride channel 1664548..1665255 - 235 1787877 b1593 b1593 H COG0132 orf, hypothetical protein 1665368..1666588 - 406 1787878 mlc b1594 K COG1940 putative NAGC-like transcriptional regulator 1666723..1667616 - 297 1787879 ynfL b1595 K COG0583 putative transcriptional regulator LYSR-type 1667723..1668976 + 417 1787880 ynfM b1596 G COG0477 putative transport protein 1669373..1669708 + 111 1787881 asr b1597 - - acid shock protein 1669984..1670805 + 273 1787882 b1598 b1598 E COG3591 orf, hypothetical protein 1670844..1671173 - 109 1787883 b1599 b1599 P COG2076 possible chaperone 1671160..1671525 - 121 1787884 b1600 b1600 P COG2076 possible chaperone 1671937..1672971 + 344 1787885 b1601 b1601 R COG0628 putative transport protein 1672996..1674384 - 462 1787886 pntB b1602 C COG1282 pyridine nucleotide transhydrogenase, beta subunit 1674395..1675927 - 510 1787887 pntA b1603 C COG3288 pyridine nucleotide transhydrogenase, alpha subunit 1676451..1677395 + 314 1787889 b1604 b1604 - - orf, hypothetical protein 1677581..1678963 + 460 1787890 b1605 b1605 E COG0531 putative arginine/ornithine antiporter 1679000..1679722 + 240 1787891 ydgB b1606 Q COG1028 putative oxidoreductase 1679719..1680054 - 111 1787892 ydgC b1607 - - orf, hypothetical protein 1680174..1680902 + 242 1787893 rstA b1608 T COG0745 response transcriptional regulatory protein (RstB sensor) 1680906..1682207 + 433 1787894 rstB b1609 T COG0642 sensor histidine protein kinase (RstA regulator) 1682283..1683212 + 309 1787895 tus b1610 - - DNA-binding protein; inhibition of replication at Ter sites 1683209..1684612 - 467 1787896 fumC b1611 C COG0114 fumarase C= fumarate hydratase Class II; isozyme 1684755..1686401 - 548 1787897 fumA b1612 C COG1838 fumarase A = fumarate hydratase Class I; aerobic isozyme 1686600..1687775 + 391 1787899 manA b1613 G COG1482 mannose-6-phosphate isomerase 1687876..1689384 + 502 1787900 ydgA b1614 - - orf, hypothetical protein 1689610..1690863 - 417 1787901 uidC b1615 - - membrane-associated protein 1690914..1692287 - 457 1787902 uidB b1616 G COG2211 glucuronide permease 1692284..1694095 - 603 1787903 uidA b1617 G COG3250 beta-D-glucuronidase 1694486..1695076 - 196 1787904 uidR b1618 K COG1309 repressor for uid operon 1695297..1696064 - 255 1787905 hdhA b1619 Q COG1028 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids 1696176..1697204 - 342 1787906 malI b1620 K COG1609 repressor of malX and Y genes 1697379..1698971 + 530 1787908 malX b1621 G COG1263 PTS system, maltose and glucose-specific II ABC 1698981..1700153 + 390 1787909 malY b1622 E COG1168 enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase 1700257..1701258 + 333 1787910 add b1623 F COG1816 adenosine deaminase 1701292..1702371 - 359 1787911 b1624 b1624 R COG0673 orf, hypothetical protein 1702973..1703188 + 71 1787912 b1625 b1625 - - orf, hypothetical protein 1703250..1703714 + 154 1787913 b1626 b1626 - - orf, hypothetical protein 1703791..1704372 + 193 1787914 b1627 b1627 C COG2209 orf, hypothetical protein 1704372..1704950 + 192 1787915 b1628 b1628 C COG2878 orf, hypothetical protein 1704943..1707165 + 740 1787916 b1629 b1629 C COG1726 putative membrane protein 1707166..1708224 + 352 1787917 ydgO b1630 C COG1805 orf, hypothetical protein 1708228..1708848 + 206 1787918 b1631 b1631 C COG2869 orf, hypothetical protein 1708852..1709547 + 231 1787919 ydgQ b1632 C COG1347 orf, hypothetical protein 1709547..1710182 + 211 1787920 nth b1633 L COG0177 endonuclease III; specific for apurinic and/or apyrimidinic sites 1710793..1712295 + 500 1787922 ydgR b1634 E COG3104 putative transport protein 1712401..1713006 + 201 1787923 gst b1635 O COG0625 glutathionine S-transferase 1713050..1713913 - 287 1787924 pdxY b1636 H COG2240 pyridoxal kinase 2 / pyridoxine kinase 1713972..1715246 - 424 1787925 tyrS b1637 J COG0162 tyrosine tRNA synthetase 1715375..1716031 - 218 1787926 pdxH b1638 H COG0259 pyridoxinephosphate oxidase 1716090..1716338 - 82 1787927 ydhA b1639 - - orf, hypothetical protein 1716517..1717626 - 369 1787928 b1640 b1640 S COG2377 orf, hypothetical protein 1717900..1718367 + 155 1787929 slyB b1641 - - putative outer membrane protein 1718414..1718854 - 146 1787930 slyA b1642 K COG1846 transcriptional regulator for cryptic hemolysin 1719049..1719285 + 78 1787931 b1643 b1643 - - orf, hypothetical protein 1719246..1720145 + 299 1787932 b1644 b1644 Q COG1566 putative membrane protein 1720145..1722157 + 670 1787933 b1645 b1645 S COG1289 orf, hypothetical protein 1722158..1722679 - 173 1787934 sodC b1646 P COG2032 superoxide dismutase precursor (Cu-Zn) 1722760..1723656 - 298 1787936 b1647 b1647 R COG0656 orf, hypothetical protein 1723705..1724082 - 125 1787937 b1648 b1648 R COG3313 orf, hypothetical protein 1724047..1724646 + 199 1787938 b1649 b1649 K COG1309 orf, hypothetical protein 1724683..1725780 + 365 1787939 nemA b1650 C COG1902 N-ethylmaleimide reductase 1725861..1726268 + 135 1787940 gloA b1651 E COG0346 lactoylglutathione lyase 1726371..1727018 + 215 1787941 rnt b1652 L COG0847 RNase T, degrades tRNA 1727111..1731727 + 1538 1787942 lhr b1653 R COG1201 member of ATP-dependent helicase superfamily II 1731778..1732125 - 115 1787943 ydhD b1654 O COG0278 orf, hypothetical protein 1732459..1733274 + 271 1787944 ydhO b1655 M COG0791 putative lipoprotein 1733402..1733983 + 193 1787946 sodB b1656 P COG0605 superoxide dismutase, iron 1734145..1735314 - 389 1787947 b1657 b1657 G COG2814 putative transport protein 1735868..1736893 + 341 1787948 purR b1658 K COG1609 transcriptional repressor for pur regulon, glyA, glnB, prsA, speA 1736890..1737822 - 310 1787949 ydhB b1659 K COG0583 putative transcriptional regulator LYSR-type 1737935..1739146 + 403 1787950 ydhC b1660 G COG0477 putative transport protein 1739437..1740585 + 382 1787951 cfa b1661 M COG2230 cyclopropane fatty acyl phospholipid synthase 1740625..1741266 - 213 1787952 ribE b1662 H COG0307 riboflavin synthase, alpha chain 1741481..1742854 + 457 1787953 ydhE b1663 Q COG0534 putative transport protein 1742895..1744151 - 418 1787954 b1664 b1664 - - possible enzyme 1744724..1745029 + 101 1787956 b1667 b1667 - - orf, hypothetical protein 1745155..1746759 + 534 1787957 b1668 b1668 - - orf, hypothetical protein 1746771..1747583 - 270 1787958 b1669 b1669 - - orf, hypothetical protein 1747587..1748372 - 261 1787959 ydhU b1670 - - orf, hypothetical protein 1748369..1749088 - 239 1787960 b1671 b1671 C COG0437 putative oxidoreductase, Fe-S subunit 1749101..1749748 - 215 1787961 b1672 b1672 - - orf, hypothetical protein 1749752..1751854 - 700 1787962 b1673 b1673 C COG2414 orf, hypothetical protein 1751875..1752501 - 208 1787963 b1674 b1674 C COG1142 putative oxidoreductase, Fe-S subunit 1752956..1753165 - 69 1787964 b1675 b1675 - - orf, hypothetical protein 1753722..1755134 + 470 1787965 pykF b1676 G COG0469 pyruvate kinase I (formerly F), fructose stimulated 1755445..1755681 + 78 1787967 lpp b1677 - - murein lipoprotein 1755745..1756749 - 334 1787968 ynhG b1678 S COG1376 orf, hypothetical protein 1756898..1757314 - 138 1787969 ynhA b1679 R COG2166 orf, hypothetical protein 1757327..1758547 - 406 1787970 b1680 b1680 E COG0520 orf, hypothetical protein 1758544..1759815 - 423 1787971 ynhC b1681 R COG0719 orf, hypothetical protein 1759790..1760536 - 248 1787972 ynhD b1682 R COG0396 putative ATP-binding component of a transport system 1760546..1762072 - 508 1787973 ynhE b1683 R COG0719 orf, hypothetical protein 1762042..1762410 - 122 1787974 ydiC b1684 S COG0316 orf, hypothetical protein 1762958..1763227 - 89 1787975 b1685 b1685 - - orf, hypothetical protein 1763246..1763656 - 136 1787976 b1686 b1686 Q COG2050 orf, hypothetical protein 1763653..1766709 - 1018 1787977 ydiJ b1687 C COG0277 putative oxidase 1767098..1768210 + 370 1787979 b1688 b1688 R COG0628 orf, hypothetical protein 1768612..1768995 + 127 1787980 b1689 b1689 - - orf, hypothetical protein 1769095..1770309 + 404 1787981 b1690 b1690 G COG0477 putative transport system permease protein 1770530..1771801 + 423 1787982 b1691 b1691 G COG0477 putative amino acid/amine transport protein 1771813..1772679 + 288 1787983 ydiB b1692 E COG0169 putative oxidoreductase 1772710..1773468 + 252 1787984 aroD b1693 E COG0710 3-dehydroquinate dehydratase 1773611..1775206 + 531 1787985 ydiF b1694 I COG1788 putative enzyme 1775166..1776371 + 401 1787986 b1695 b1695 I COG1960 putative oxidoreductase 1776414..1777325 - 303 1787987 b1696 b1696 K COG2207 putative ARAC-type regulatory protein 1777641..1778405 + 254 2367123 ydiQ b1697 C COG2086 putative transport protein 1778425..1779363 + 312 1787990 ydiR b1698 C COG2025 putative flavoprotein 1779419..1780708 + 429 1787991 ydiS b1699 C COG0644 flavoprotein; probably electron transport 1780705..1780998 + 97 1787992 ydiT b1700 C COG2440 orf, hypothetical protein 1781001..1782701 + 566 1787993 ydiD b1701 I COG0318 putative ligase/synthetase 1782758..1785136 - 792 1787994 ppsA b1702 G COG0574 phosphoenolpyruvate synthase 1785469..1786302 + 277 1787995 ydiA b1703 S COG1806 orf, hypothetical protein 1786459..1787505 + 348 1787996 aroH b1704 E COG0722 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible) 1787637..1787828 + 63 1787998 ydiE b1705 - - orf, hypothetical protein 1787832..1789268 - 478 1787999 b1706 b1706 S COG0397 orf, hypothetical protein 1789331..1790044 - 237 1788000 b1707 b1707 T COG2200 orf, hypothetical protein 1790291..1790755 - 154 1788001 nlpC b1708 M COG0791 lipoprotein 1790833..1791582 - 249 1788002 btuD b1709 P COG1120 ATP-binding component of vitamin B12 transport system 1791582..1792133 - 183 1788003 btuE b1710 O COG0386 vitamin B12 transport 1792196..1793176 - 326 1788004 btuC b1711 P COG0609 vitamin B12 transport permease protein 1793277..1793576 - 99 1788005 himA b1712 L COG0776 integration host factor (IHF), alpha subunit; site specific recombination 1793581..1795968 - 795 1788006 pheT b1713 J COG0072 phenylalanine tRNA synthetase, beta-subunit 1795983..1796966 - 327 1788007 pheS b1714 J COG0016 phenylalanine tRNA synthetase, alpha-subunit 1797250..1797294 - 14 1788008 pheM b1715 - - phenylalanyl-tRNA synthetase (pheST) operon leader peptide 1797417..1797773 - 118 1788009 rplT b1716 J COG0292 50S ribosomal subunit protein L20, and regulator 1797826..1798023 - 65 1788010 rpmI b1717 J COG0291 50S ribosomal subunit protein A 1798120..1798662 - 180 1788012 infC b1718 J COG0290 protein chain initiation factor IF-3 1798666..1800594 - 642 1788013 thrS b1719 J COG0441 threonine tRNA synthetase 1801118..1801591 + 157 1788014 b1720 b1720 - - orf, hypothetical protein 1801602..1803017 + 471 1788015 b1721 b1721 - - orf, hypothetical protein 1803349..1804107 - 252 1788016 b1722 b1722 M COG3137 orf, hypothetical protein 1804394..1805323 + 309 1788017 pfkB b1723 G COG1105 6-phosphofructokinase II; suppressor of pfkA 1805424..1805714 + 96 1788018 b1724 b1724 - - orf, hypothetical protein 1805820..1806680 + 286 1788019 b1725 b1725 S COG3001 orf, hypothetical protein 1806721..1807257 - 178 1788020 b1726 b1726 - - orf, hypothetical protein 1807404..1808072 + 222 1788021 yniC b1727 R COG0637 putative phosphatase 1808223..1808825 + 200 1788023 b1728 b1728 R COG1988 orf, hypothetical protein 1808958..1810349 + 463 1788024 b1729 b1729 R COG1823 part of a kinase 1810353..1811168 - 271 1788025 b1730 b1730 - - orf, hypothetical protein 1811445..1811708 - 87 1788026 b1731 b1731 - - orf, hypothetical protein 1811891..1814152 + 753 1788027 katE b1732 P COG0753 catalase; hydroperoxidase HPII(III) 1814410..1815159 - 249 1788028 ydjC b1733 S COG3394 orf, hypothetical protein 1815172..1816524 - 450 1788029 celF b1734 G COG1486 phospho-beta-glucosidase; cryptic 1816629..1817471 - 280 1788030 celD b1735 K COG2207 negative transcriptional regulator of cel operon 1817479..1817829 - 116 1788031 celC b1736 G COG1447 PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin 1817880..1819238 - 452 1788032 celB b1737 G COG1455 PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin 1819323..1819643 - 106 1788034 celA b1738 G COG1440 PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin 1819942..1820280 - 112 1788035 osmE b1739 - - activator of ntrL gene 1820482..1821309 + 275 1788036 nadE b1740 H COG0171 NAD synthetase, prefers NH3 over glutamine 1821539..1822426 + 295 1788037 b1741 b1741 L COG0322 putative excinuclease subunit 1822386..1823024 - 212 1788038 b1742 b1742 - - orf, hypothetical protein 1823164..1823649 - 161 1788039 spy b1743 - - periplasmic protein related to spheroblast formation 1823979..1824947 - 322 1788040 ydjS b1744 E COG2988 orf, hypothetical protein 1824940..1826283 - 447 1788041 b1745 b1745 - - orf, hypothetical protein 1826280..1827758 - 492 1788042 b1746 b1746 C COG1012 putative aldehyde dehydrogenase 1827755..1828789 - 344 1788043 b1747 b1747 E COG3138 orf, hypothetical protein 1828786..1830006 - 406 1788044 cstC b1748 E COG0160 acetylornithine delta-aminotransferase 1830452..1831258 + 268 1788046 xthA b1749 L COG0708 exonuclease III 1831377..1832135 + 252 1788047 ydjX b1750 S COG0398 orf, hypothetical protein 1831978..1832817 + 279 1788048 ydjY b1751 - - orf, hypothetical protein 1832832..1833539 + 235 1788049 ydjZ b1752 S COG0398 orf, hypothetical protein 1833539..1834087 + 182 1788050 ynjA b1753 S COG2128 orf, hypothetical protein 1834094..1835263 + 389 1788051 b1754 b1754 - - orf, hypothetical protein 1835281..1836771 + 496 1788052 b1755 b1755 H COG1178 putative transport system permease protein 1836771..1837424 + 217 1788053 b1756 b1756 G COG1130 putative ATP-binding component of a transport system 1837476..1838798 + 440 1788054 b1757 b1757 P COG2897 putative thiosulfate sulfur transferase 1838807..1839433 - 208 1788055 b1758 b1758 I COG0558 putative cytochrome oxidase 1839514..1839921 + 135 1788056 b1759 b1759 L COG0494 orf, hypothetical protein 1839887..1840159 - 90 1788057 b1760 b1760 - - orf, hypothetical protein 1840395..1841738 + 447 1788059 gdhA b1761 E COG0334 NADP-specific glutamate dehydrogenase 1841855..1843018 - 387 1788060 b1762 b1762 - - orf, hypothetical protein 1843023..1844984 - 653 1788061 topB b1763 L COG0550 DNA topoisomerase III 1844989..1846032 - 347 1788062 selD b1764 E COG0709 selenophosphate synthase, H(2)Se added to acrylyl-tRNA 1846149..1846700 - 183 1788063 ydjA b1765 C COG0778 orf, hypothetical protein 1846861..1848717 + 618 1788064 sppA b1766 N COG0616 protease IV, a signal peptide peptidase 1848884..1849900 + 338 1788065 ansA b1767 E COG0252 cytoplasmic L-asparaginase I 1849893..1850552 + 219 1788066 ydjB b1768 Q COG1335 orf, hypothetical protein 1850645..1852003 - 452 1788068 ydjE b1769 G COG0477 putative transport protein 1852120..1852878 - 252 1788069 b1770 b1770 K COG1349 putative DEOR-type transcriptional regulator 1853015..1853995 - 326 1788070 b1771 b1771 C COG0667 orf, hypothetical protein 1854005..1854973 - 322 1788071 b1772 b1772 G COG0524 putative kinase 1854957..1855793 - 278 1788072 b1773 b1773 G COG0191 putative aldolase 1855814..1856857 - 347 1788073 ydjJ b1774 E COG1063 putative oxidoreductase 1856874..1858253 - 459 1788074 b1775 b1775 G COG0477 putative transport protein 1858280..1859356 - 358 1788075 b1776 b1776 E COG1063 putative oxidoreductase 1859726..1860043 - 105 1788076 b1777 b1777 S COG3139 orf, hypothetical protein 1860040..1860453 - 137 1788077 yeaA b1778 O COG0229 orf, hypothetical protein 1860795..1861790 + 331 1788079 gapA b1779 G COG0057 glyceraldehyde-3-phosphate dehydrogenase A 1861853..1862758 + 301 1788080 yeaD b1780 G COG0676 orf, hypothetical protein 1862806..1863660 - 284 1788081 b1781 b1781 R COG0656 putative an aldehyde reductase 1863750..1864496 - 248 1788082 yeaF b1782 - - orf, hypothetical protein 1864932..1866866 + 644 1788083 yeaG b1783 T COG2766 orf, hypothetical protein 1866979..1868262 + 427 1788084 yeaH b1784 S COG2718 orf, hypothetical protein 1868409..1869884 + 491 1788085 yeaI b1785 T COG2199 orf, hypothetical protein 1869885..1871555 + 556 1788086 yeaJ b1786 T COG2199 orf, hypothetical protein 1871598..1872101 + 167 1788087 yeaK b1787 - - orf, hypothetical protein 1872102..1872254 - 50 1788088 b1788 b1788 - - orf, hypothetical protein 1872376..1872822 + 148 1788090 yeaL b1789 S COG2707 orf, hypothetical protein 1872779..1873600 - 273 1788091 yeaM b1790 K COG2207 putative ARAC-type regulatory protein 1873697..1874878 + 393 1788092 yeaN b1791 P COG2807 putative amino acid/amine transport protein 1874912..1875280 + 122 1788093 yeaO b1792 - - orf, hypothetical protein 1875302..1875556 - 84 1788094 yoaF b1793 S COG3042 orf, hypothetical protein 1875610..1876764 + 384 1788095 yeaP b1794 T COG2199 orf, hypothetical protein 1877031..1877279 - 82 1788096 yeaQ b1795 S COG2261 orf, hypothetical protein 1877427..1877609 - 60 1788097 yoaG b1796 - - orf, hypothetical protein 1877613..1877972 - 119 1788098 yeaR b1797 - - orf, hypothetical protein 1878145..1878783 - 212 1788099 yeaS b1798 E COG1280 orf, hypothetical protein 1878910..1879854 - 314 1788100 yeaT b1799 K COG0583 putative transcriptional regulator LYSR-type 1879936..1881021 + 361 1788101 yeaU b1800 E COG0473 putative tartrate dehydrogenase 1881212..1882657 + 481 1788102 yeaV b1801 M COG1292 putative transport protein 1882689..1883813 + 374 1788103 yeaW b1802 P COG2146 orf, hypothetical protein 1883869..1884834 + 321 1788104 yeaX b1803 C COG1018 putative diogenase beta subunit 1884888..1886015 - 375 1788105 rnd b1804 J COG0349 RNase D, processes tRNA precursor 1886085..1887770 - 561 1788107 fadD b1805 I COG0318 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase 1887975..1888556 - 193 1788108 b1806 b1806 M COG3065 putative outer membrane protein 1888596..1889291 - 231 1788109 yeaZ b1807 O COG1214 orf, hypothetical protein 1889349..1891259 - 636 1788110 b1808 b1808 L COG1199 putative enzyme 1891343..1891735 + 130 1788111 b1809 b1809 J COG0251 orf, hypothetical protein 1892097..1892456 + 119 1788112 b1810 b1810 - - orf, hypothetical protein 1892576..1892755 - 59 1788113 b1811 b1811 S COG3140 orf, hypothetical protein 1892829..1894190 + 453 1788114 pabB b1812 E COG0147 p-aminobenzoate synthetase, component I 1894194..1894772 + 192 1788115 yeaB b1813 L COG0494 orf, hypothetical protein 1894956..1896320 + 454 1788116 sdaA b1814 E COG1760 L-serine deaminase 1896421..1898049 + 542 1788118 b1815 b1815 T COG2200 orf, hypothetical protein 1898053..1899609 - 518 1788119 yoaE b1816 P COG0861 putative transport protein 1900072..1901043 + 323 1788120 manX b1817 G COG3444 PTS enzyme IIAB, mannose-specific 1901106..1901906 + 266 1788121 manY b1818 - - PTS enzyme IIC, mannose-specific 1901910..1902770 + 286 1788122 manZ b1819 - - PTS enzyme IID, mannose-specific 1902825..1903283 + 152 1788123 b1820 b1820 - - orf, hypothetical protein 1903658..1904278 + 206 1788124 b1821 b1821 S COG1971 orf, hypothetical protein 1904275..1905084 - 269 1788125 yebH b1822 Q COG0500 putative enzyme 1905250..1905459 - 69 1788126 cspC b1823 K COG1278 cold shock protein 1905472..1905615 - 47 1788127 b1824 b1824 - - orf, hypothetical protein 1906285..1906572 - 95 1788128 b1825 b1825 - - orf, hypothetical protein 1906647..1906790 - 47 1788130 b1826 b1826 - - orf, hypothetical protein 1907332..1908123 - 263 1788131 b1827 b1827 K COG1414 putative regulator 1908189..1909673 + 494 1788132 b1828 b1828 G COG0477 putative transport protein 1909719..1910600 - 293 1788133 htpX b1829 O COG0501 heat shock protein, integral membrane protein 1910792..1912840 - 682 1788134 prc b1830 M COG0793 carboxy-terminal protease for penicillin-binding protein 3 1912860..1912979 - 39 1788135 yebJ b1831 T COG3109 orf, hypothetical protein 1913655..1914206 - 183 1788136 b1832 b1832 T COG1956 orf, hypothetical protein 1914282..1915565 + 427 1788137 b1833 b1833 S COG2995 orf, hypothetical protein 1915528..1918167 + 879 1788138 b1834 b1834 R COG3008 orf, hypothetical protein 1918241..1919686 + 481 1788140 yebU b1835 J COG0144 putative nucleolar proteins 1919789..1920040 + 83 1788141 b1836 b1836 - - orf, hypothetical protein 1920061..1920336 + 91 1788142 b1837 b1837 - - orf, hypothetical protein 1920337..1920996 - 219 1788143 pphA b1838 T COG0639 protein phosphatase 1 modulates phosphoproteins, signals protein misfolding 1921389..1921730 - 113 1788144 b1839 b1839 - - orf, hypothetical protein 1921743..1922615 - 290 1788145 b1840 b1840 P COG1276 putative resistance protein 1922619..1922993 - 124 1788146 b1841 b1841 R COG2372 orf, hypothetical protein 1923132..1923362 + 76 1788147 holE b1842 - - DNA polymerase III, theta subunit 1923464..1924120 + 218 1788148 b1843 b1843 - - orf, hypothetical protein 1924144..1924806 + 220 1788149 b1844 b1844 L COG0847 orf, hypothetical protein 1924803..1926863 - 686 1788150 ptrB b1845 E COG1770 protease II 1927072..1927731 - 219 1788151 yebE b1846 S COG2979 orf, hypothetical protein 1928058..1928426 - 122 1788152 yebF b1847 - - orf, hypothetical protein 1928481..1928771 - 96 1788153 yebG b1848 S COG3141 orf, hypothetical protein 1928905..1930083 + 392 1788155 purT b1849 F COG0027 phosphoribosylglycinamide formyltransferase 2 1930139..1930780 - 213 1788156 eda b1850 G COG0800 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase 1930817..1932628 - 603 1788157 edd b1851 E COG0129 6-phosphogluconate dehydratase 1932863..1934338 - 491 1788158 zwf b1852 G COG0364 glucose-6-phosphate dehydrogenase 1934676..1935545 + 289 1788159 yebK b1853 K COG1737 orf, hypothetical protein 1935673..1937115 + 480 1788160 pykA b1854 G COG0469 pyruvate kinase II, glucose stimulated 1937246..1938217 - 323 1788161 msbB b1855 N COG1560 suppressor of htrB, heat shock protein 1938337..1939596 - 419 1788162 yebA b1856 M COG0739 orf, hypothetical protein 1939675..1940661 - 328 1788164 yebL b1857 P COG0803 putative adhesin 1940686..1941441 + 251 1788165 yebM b1858 P COG1121 putative ATP-binding component of a transport system 1941438..1942223 + 261 1788166 yebI b1859 P COG1108 orf, hypothetical protein 1942370..1943380 - 336 1788167 ruvB b1860 L COG2255 Holliday junction helicase subunit A; branch migration; repair 1943389..1944000 - 203 1788168 ruvA b1861 L COG0632 Holliday junction helicase subunit B; branch migration; repair 1944176..1944877 + 233 1788169 yebB b1862 - - orf, hypothetical protein 1944879..1945400 - 173 1788170 ruvC b1863 L COG0817 Holliday junction nuclease; resolution of structures; repair 1945435..1946175 - 246 1788171 yebC b1864 S COG0217 orf, hypothetical protein 1946204..1946656 - 150 1788172 ntpA b1865 L COG0494 dATP pyrophosphohydrolase 1946774..1948546 - 590 1788173 aspS b1866 J COG0173 aspartate tRNA synthetase 1948823..1949422 + 199 1788174 yecD b1867 Q COG1335 orf, hypothetical protein 1949419..1950237 + 272 1788175 yecE b1868 S COG1801 orf, hypothetical protein 1950260..1950685 + 141 1788176 yecN b1869 - - orf, hypothetical protein 1950726..1951469 + 247 1788177 yecO b1870 Q COG0500 orf, hypothetical protein 1951466..1952437 + 323 1788178 yecP b1871 Q COG0500 putative enzyme 1952602..1955049 - 815 1788180 bisZ b1872 C COG0243 biotin sulfoxide reductase 2 1955056..1956156 - 366 1788181 yecK b1873 C COG3005 putative cytochrome C-type protein 1956544..1956984 - 146 1788182 cutC b1874 P COG3142 copper homeostasis protein 1957304..1957876 - 190 1788183 yecM b1875 S COG3102 orf, hypothetical protein 1958086..1959819 + 577 1788184 argS b1876 J COG0018 arginine tRNA synthetase 1959975..1960484 + 169 1788185 yecT b1877 - - orf, hypothetical protein 1960604..1960996 - 130 1788186 flhE b1878 - - flagellar protein 1960996..1963074 - 692 1788187 flhA b1879 N COG1298 flagellar biosynthesis; possible export of flagellar proteins 1963067..1964215 - 382 1788188 flhB b1880 N COG1377 putative part of export apparatus for flagellar proteins 1964417..1965061 - 214 1788190 cheZ b1881 N COG3143 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator 1965072..1965461 - 129 1788191 cheY b1882 T COG0784 chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components 1965476..1966525 - 349 1788192 cheB b1883 N COG2201 response regulator for chemotaxis (cheA sensor); protein methylesterase 1966528..1967388 - 286 1788193 cheR b1884 N COG1352 response regulator for chemotaxis; protein glutamate methyltransferase 1967407..1969008 - 533 1788194 tap b1885 N COG0840 methyl-accepting chemotaxis protein IV, peptide sensor receptor 1969054..1970715 - 553 1788195 tar b1886 N COG0840 methyl-accepting chemotaxis protein II, aspartate sensor receptor 1970860..1971363 - 167 1788196 cheW b1887 N COG0835 positive regulator of CheA protein activity 1971384..1973348 - 654 1788197 cheA b1888 N COG0643 sensory transducer kinase between chemo- signal receptors and CheB and CheY 1973353..1974279 - 308 1788198 motB b1889 N COG1360 enables flagellar motor rotation, linking torque machinery to cell wall 1974276..1975163 - 295 1788199 motA b1890 N COG1291 proton conductor component of motor; no effect on switching 1975290..1975868 - 192 1788201 flhC b1891 - - regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor 1975871..1976230 - 119 1788202 flhD b1892 - - regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor 1976542..1977045 - 167 1788203 insB_5 b1893 L COG1662 IS1 protein InsB 1976964..1977239 - 91 1788204 insA_5 b1894 - - IS1 protein InsA 1977777..1978205 + 142 1788205 yecG b1895 T COG0589 putative regulator 1978212..1979636 - 474 1788206 otsA b1896 G COG0380 trehalose-6-phosphate synthase 1979611..1980411 - 266 1788207 otsB b1897 G COG1877 trehalose-6-phosphate phophatase, biosynthetic 1980578..1980838 - 86 1788208 araH_2 b1898 - - high-affinity L-arabinose transport system; membrane protein, fragment 2 1980862..1981566 - 234 1788209 araH_1 b1899 - - high-affinity L-arabinose transport system; membrane protein, fragment 1 1981578..1983092 - 504 1788210 araG b1900 G COG1129 ATP-binding component of high-affinity L-arabinose transport system 1983162..1984151 - 329 1788211 araF b1901 G COG1879 L-arabinose-binding periplasmic protein 1984948..1985451 + 167 1788212 yecI b1902 P COG1528 ferritin-like protein 1985467..1985805 + 112 1788213 b1903 b1903 - - orf, hypothetical protein 1986245..1986568 + 107 1788215 b1904 b1904 - - orf, hypothetical protein 1986739..1987236 + 165 1788216 ftn b1905 P COG1528 cytoplasmic ferritin (an iron storage protein) 1987274..1987513 - 79 1788217 yecH b1906 - - orf, hypothetical protein 1987704..1988915 + 403 1788218 tyrP b1907 E COG0814 tyrosine-specific transport system 1988977..1989642 - 221 1788219 yecA b1908 R COG3318 orf, hypothetical protein 1990292..1990840 - 182 1788220 pgsA b1912 I COG0558 phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase 1990897..1992663 - 588 1788221 uvrC b1913 L COG0322 excinuclease ABC, subunit C; repair of UV damage to DNA 1992726..1993382 - 218 1788222 uvrY b1914 T COG2197 putative 2-component transcriptional regulator 1993841..1994065 + 74 1788223 yecF b1915 - - orf, hypothetical protein 1994133..1994855 - 240 1788224 sdiA b1916 K COG2771 transcriptional regulator of ftsQAZ gene cluster 1995085..1995837 - 250 1788225 yecC b1917 E COG1126 putative ATP-binding component of a transport system 1995834..1996502 - 222 1788226 yecS b1918 E COG0765 putative transport system permease protein (former yecC) 1996517..1997599 - 360 1788227 yedO b1919 E COG2515 putative 1-aminocyclopropane-1-carboxylate deaminase 1997608..1998408 - 266 1788228 fliY b1920 E COG0834 putative periplasmic binding transport protein 1998496..1999083 - 195 1788230 fliZ b1921 - - orf, hypothetical protein 1999093..1999812 - 239 1788231 fliA b1922 K COG1191 flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons 2000133..2001629 - 498 1788232 fliC b1923 N COG1344 flagellar biosynthesis; flagellin, filament structural protein 2001895..2003301 + 468 1788233 fliD b1924 N COG1345 flagellar biosynthesis; filament capping protein; enables filament assembly 2003326..2003736 + 136 1788234 fliS b1925 N COG1516 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) 2003736..2004101 + 121 1788235 fliT b1926 - - flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) 2004179..2005666 + 495 1788236 amyA b1927 G COG0366 cytoplasmic alpha-amylase 2005700..2006113 - 137 1788237 yedD b1928 - - orf, hypothetical protein 2006300..2007505 + 401 1788238 yedE b1929 R COG2391 putative transport system permease protein 2007502..2007735 + 77 1788239 yedF b1930 K COG0425 orf, hypothetical protein 2007844..2008497 + 217 1788240 yedK b1931 S COG2135 orf, hypothetical protein 2008622..2009101 + 159 1788242 yedL b1932 K COG0454 orf, hypothetical protein 2009370..2009561 - 63 1788243 b1933 b1933 - - orf, hypothetical protein 2009571..2009891 - 106 1788244 yedN b1934 - - orf, hypothetical protein 2010023..2010373 - 116 1788245 yedM b1935 - - orf, hypothetical protein 2010524..2010802 + 92 1788246 b1936 b1936 L COG0582 orf, hypothetical protein 2010722..2011036 - 104 1788247 fliE b1937 N COG1677 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction 2011251..2012909 + 552 1788248 fliF b1938 N COG1766 flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein 2012902..2013897 + 331 1788249 fliG b1939 N COG1536 flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction 2013869..2014576 + 235 1788250 fliH b1940 N COG1317 flagellar biosynthesis; export of flagellar proteins? 2014576..2015949 + 457 1788251 fliI b1941 N COG1157 flagellum-specific ATP synthase 2015968..2016411 + 147 1788252 fliJ b1942 N COG2882 flagellar fliJ protein 2016408..2017535 + 375 1788253 fliK b1943 N COG3144 flagellar hook-length control protein 2017640..2018104 + 154 1788254 fliL b1944 N COG1580 flagellar biosynthesis 2018109..2019113 + 334 1788255 fliM b1945 N COG1868 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction 2019110..2019523 + 137 1788256 fliN b1946 N COG1886 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction 2019586..2019891 + 101 1788258 fliO b1947 N COG3190 flagellar biosynthesis 2019891..2020628 + 245 1788259 fliP b1948 N COG1338 flagellar biosynthesis 2020638..2020907 + 89 1788260 fliQ b1949 N COG1987 flagellar biosynthesis 2020915..2021700 + 261 1788261 fliR b1950 N COG1684 flagellar biosynthesis 2021990..2022613 + 207 1788262 rcsA b1951 K COG2771 positive regulator for ctr capsule biosynthesis, positive transcription factor 2022657..2022845 - 62 1788263 dsrB b1952 - - orf, hypothetical protein 2022993..2023235 + 80 1788264 b1953 b1953 - - orf, hypothetical protein 2023533..2024348 + 271 1788265 b1955 b1955 - - orf, hypothetical protein 2024345..2026054 - 569 1788266 b1956 b1956 T COG2199 orf, hypothetical protein 2026210..2026392 - 60 1788267 b1957 b1957 - - orf, hypothetical protein 2026471..2027388 - 305 1788268 yedI b1958 S COG2354 orf, hypothetical protein 2027561..2028481 + 306 1788269 yedA b1959 G COG0697 putative transmembrane subunit 2028470..2028940 - 156 1788270 vsr b1960 - - DNA mismatch endonuclease, patch repair protein 2028921..2030339 - 472 1788271 dcm b1961 L COG0270 DNA cytosine methylase 2030406..2031101 - 231 1788273 yedJ b1962 R COG1418 orf, hypothetical protein 2031141..2031524 - 127 1788274 b1963 b1963 - - orf, hypothetical protein 2032043..2032558 + 171 1788275 b1964 b1964 M COG3203 putative outer membrane protein 2032568..2032777 + 69 1788276 b1965 b1965 M COG3203 orf, hypothetical protein 2032861..2033265 + 134 1788277 b1966 b1966 M COG3203 putative outer membrane protein 2033857..2034708 + 283 1788278 yedU b1967 R COG0693 orf, hypothetical protein 2034816..2036174 - 452 1788279 yedV b1968 T COG0642 putative 2-component sensor protein 2036174..2036893 - 239 1788280 yedW b1969 T COG0745 putative 2-component transcriptional regulator 2036978..2037391 + 137 1788281 b1970 b1970 R COG2351 orf, hypothetical protein 2037500..2038504 + 334 1788282 b1971 b1971 R COG2041 putative reductase 2038505..2039140 + 211 1788283 b1972 b1972 S COG2717 orf, hypothetical protein 2039397..2040047 + 216 1788284 b1973 b1973 R COG3443 orf, hypothetical protein 2040360..2040920 + 186 1788286 yodB b1974 C COG3038 putative cytochrome 2041634..2042470 + 278 1788287 b1976 b1976 S COG3228 orf, hypothetical protein 2042885..2050036 + 2383 1788288 b1978 b1978 - - putative factor 2050298..2050624 - 108 1788290 b1979 b1979 M COG0859 orf, hypothetical protein 2050646..2051350 - 234 1788291 b1980 b1980 M COG0859 orf, hypothetical protein 2051665..2052981 + 438 1788292 shiA b1981 G COG0477 putative transport protein, shikimate 2053083..2054537 + 484 1788293 amn b1982 F COG0775 AMP nucleosidase 2054880..2055596 + 238 1788294 b1983 b1983 S COG0217 orf, hypothetical protein 2056225..2057868 - 547 2367126 yeeO b1985 Q COG0534 orf, hypothetical protein 2057986..2058936 - 316 1788296 cbl b1987 K COG0583 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM 2059038..2059955 - 305 1788297 nac b1988 K COG0583 nitrogen assimilation control protein 2060413..2061345 - 310 1788299 erfK b1990 S COG1376 orf, hypothetical protein 2061410..2062489 - 359 1788300 cobT b1991 H COG2038 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase 2062501..2063244 - 247 1788301 cobS b1992 H COG0368 cobalamin 5'-phosphate synthase 2063241..2063786 - 181 1788302 cobU b1993 H COG2087 cobinamide kinase/cobinamide phosphate guanylyltransferase 2064327..2065343 - 338 1788303 trs5_6 b1994 L COG3039 IS5 transposase 2066630..2067049 + 139 1788304 b1995 b1995 P COG1629 orf, hypothetical protein 2066974..2067879 - 301 1788305 yi22_3 b1996 L COG2801 IS2 hypothetical protein 2067837..2068247 - 136 1788306 yi21_3 b1997 L COG2963 IS2 hypothetical protein 2068266..2068526 + 86 1788307 b1998 b1998 P COG1629 orf, hypothetical protein 2068523..2069233 + 236 1788308 yeeP b1999 - - putative histone 2069405..2072680 + 1091 1788309 flu b2000 - - outer membrane fluffing protein, similar to adhesin 2072795..2074333 + 512 1788311 b2001 b2001 - - orf, hypothetical protein 2074330..2074776 + 148 1788312 yeeS b2002 L COG2003 putative DNA repair protein, RADC family 2074839..2075060 + 73 1788313 yeeT b2003 - - orf, hypothetical protein 2075134..2075502 + 122 1788314 yeeU b2004 - - putative structural protein 2075591..2075965 + 124 1788315 yeeV b2005 - - orf, hypothetical protein 2075962..2076156 + 64 1788316 yeeW b2006 - - orf, hypothetical protein 2077054..2077449 - 131 1788317 yeeX b2007 S COG2926 putative alpha helix protein 2077555..2078613 - 352 1788318 yeeA b2008 S COG1289 orf, hypothetical protein 2078811..2079284 - 157 1788319 sbmC b2009 L COG3449 SbmC protein 2079403..2080575 - 390 1788320 dacD b2010 M COG1686 penicillin binding protein 6b 2080778..2082205 + 475 1788321 sbcB b2011 L COG2925 exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase 2082248..2082475 - 75 1788322 yeeD b2012 K COG0425 orf, hypothetical protein 2082489..2083547 - 352 1788323 yeeE b2013 R COG2391 putative transport system permease protein 2083726..2085090 - 454 1788325 yeeF b2014 E COG0531 putative amino acid/amine transport protein 2085351..2086301 - 316 1788326 yeeY b2015 K COG0583 putative transcriptional regulator LYSR-type 2086326..2087150 - 274 1788327 b2016 b2016 M COG0451 putative enzyme of sugar metabolism 2087484..2087762 - 92 1788328 yefM b2017 S COG2161 orf, hypothetical protein 2088018..2088068 + 16 1788329 hisL b2018 - - his operon leader peptide 2088214..2089113 + 299 1788330 hisG b2019 E COG0040 ATP phosphoribosyltransferase 2089119..2090423 + 434 1788331 hisD b2020 E COG0141 L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase 2090420..2091490 + 356 1788332 hisC b2021 E COG0079 histidinol-phosphate aminotransferase 2091487..2092557 + 356 1788333 hisB b2022 E COG0131 imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase 2092557..2093147 + 196 1788334 hisH b2023 E COG0118 glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme 2093144..2093884 + 246 1788335 hisA b2024 E COG0106 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase 2093866..2094642 + 258 1788336 hisF b2025 E COG0107 imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme 2094636..2095247 + 203 2367128 hisI b2026 E COG0140 phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase 2095343..2096359 - 338 1788339 wzzB b2027 - - regulator of length of O-antigen component of lipopolysaccharide chains 2096469..2097635 - 388 1788340 ugd b2028 M COG1004 UDP-glucose 6-dehydrogenase 2097884..2099290 - 468 1788341 gnd b2029 G COG0362 gluconate-6-phosphate dehydrogenase, decarboxylating 2099917..2100933 - 338 1788342 trs5_7 b2030 L COG3039 IS5 transposase 2100938..2101411 - 157 1788343 yefJ b2031 - - putative creatinase (EC 3.5.-) 2101413..2102531 - 372 1788344 wbbK b2032 M COG0438 putative glucose transferase 2102516..2103106 - 196 1788345 wbbJ b2033 R COG0110 putative O-acetyl transferase 2103087..2104079 - 330 1788346 wbbI b2034 - - putative Galf transferase 2104082..2105248 - 388 1788347 wbbH b2035 - - O-antigen polymerase 2105248..2106351 - 367 1788348 glf b2036 M COG0562 UDP-galactopyranose mutase 2106359..2107606 - 415 1788349 rfbX b2037 R COG2244 putative O-antigen transporter 2107603..2108160 - 185 1788350 rfbC b2038 M COG1898 dTDP-6-deoxy-D-glucose-3,5 epimerase 2108160..2109041 - 293 1788351 rfbA b2039 M COG1209 glucose-1-phosphate thymidylyltransferase 2109099..2109998 - 299 1788352 rfbD b2040 M COG1091 dTDP-6-deoxy-L-mannose-dehydrogenase 2109998..2111083 - 361 1788353 rfbB b2041 M COG1088 dTDP-glucose 4,6 dehydratase 2111456..2112349 - 297 1788355 galF b2042 M COG1210 homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase 2112524..2113918 - 464 1788356 wcaM b2043 - - orf, hypothetical protein 2113929..2115149 - 406 1788357 wcaL b2044 M COG0438 putative colanic acid biosynthesis glycosyl transferase 2115146..2116426 - 426 1788358 wcaK b2045 S COG2327 putative galactokinase (EC 2.7.1.6). 2116702..2118180 - 492 1788359 wzxC b2046 R COG2244 probable export protein 2118182..2119576 - 464 1788360 wcaJ b2047 M COG2148 putative colanic acid biosynthsis UDP-glucose lipid carrier transferase 2119631..2121001 - 456 1788361 cpsG b2048 G COG1109 phosphomannomutase 2121106..2122542 - 478 1788362 cpsB b2049 M COG0836 mannose-1-phosphate guanyltransferase 2122545..2123768 - 407 1788363 wcaI b2050 M COG0438 putative colanic biosynthesis glycosyl transferase 2123765..2124247 - 160 1788364 wcaH b2051 L COG0494 GDP-mannose mannosyl hydrolase 2124247..2125212 - 321 1788365 wcaG b2052 M COG0451 putative nucleotide di-P-sugar epimerase or dehydratase 2125215..2126336 - 373 1788366 gmd b2053 M COG1089 GDP-D-mannose dehydratase 2126362..2126910 - 182 1788367 wcaF b2054 R COG0110 putative transferase 2126926..2127672 - 248 1788368 wcaE b2055 M COG0463 putative colanic acid biosynthesis glycosyl transferase 2127683..2128900 - 405 1788369 wcaD b2056 - - putative colanic acid polymerase 2128875..2130092 - 405 1788370 wcaC b2057 M COG0438 putative glycosyl transferase 2130089..2130577 - 162 1788371 wcaB b2058 E COG1045 putative transferase 2130580..2131419 - 279 1788372 wcaA b2059 M COG0463 putative regulator 2131512..2133710 - 732 1788374 b2060 b2060 D COG0489 orf, hypothetical protein 2133677..2134120 - 147 1788375 wzb b2061 T COG0394 probable protein-tyrosine-phosphatase 2134126..2135265 - 379 1788376 wza b2062 M COG1596 putative polysaccharide export protein 2135858..2137507 + 549 1788377 yegH b2063 R COG1253 putative transport protein 2137781..2139634 - 617 1788378 asmA b2064 M COG2982 suppressor of ompF assembly mutants 2139656..2140237 - 193 1788379 dcd b2065 F COG0717 2'-deoxycytidine 5'-triphosphate deaminase 2140329..2141024 - 231 1788380 udk b2066 F COG0572 uridine/cytidine kinase 2141288..2144605 + 1105 1788381 yegE b2067 T COG2202 putative sensor-type protein 2144714..2145562 - 282 1788383 alkA b2068 L COG0122 3-methyl-adenine DNA glycosylase II, inducible 2145633..2147048 + 471 1788384 yegD b2069 O COG0443 putative heat shock protein 2147061..2149007 - 648 1788385 b2070 b2070 - - putative chaperonin 2149207..2149668 + 153 1788386 b2071 b2071 - - orf, hypothetical protein 2149733..2150494 - 253 1788387 b2072 b2072 - - orf, hypothetical protein 2150491..2151150 - 219 1788388 b2073 b2073 - - orf, hypothetical protein 2151891..2153285 + 464 1788389 b2074 b2074 Q COG0845 putative membrane protein 2153285..2156407 + 1040 1788390 yegN b2075 Q COG0841 orf, hypothetical protein 2156408..2159485 + 1025 1788391 yegO b2076 Q COG0841 orf, hypothetical protein 2159486..2160901 + 471 1788392 yegB b2077 G COG0477 putative transport protein 2160898..2162301 + 467 1788393 baeS b2078 T COG0642 sensor protein (for BaeR) 2162298..2163020 + 240 1788394 baeR b2079 T COG0745 transcriptional response regulatory protein (sensor BaeS) 2163172..2163543 + 123 1788396 b2080 b2080 S COG3422 orf, hypothetical protein 2163690..2165051 + 453 1788397 yegQ b2081 O COG0826 orf, hypothetical protein 2165324..2165542 - 72 1788398 ogrK b2082 - - prophage P2 ogr protein 2165624..2165770 - 48 1788399 b2083 b2083 - - orf, hypothetical protein 2165757..2166023 - 88 1788400 b2084 b2084 - - orf, hypothetical protein 2166011..2166388 - 125 1788401 b2085 b2085 - - orf, hypothetical protein 2166734..2167633 + 299 1788402 b2086 b2086 S COG1597 orf, hypothetical protein 2167715..2168161 - 148 1788403 gatR_1 b2087 - - split galactitol utilization operon repressor, interrupted 2168249..2168557 + 102 1788404 b2088 b2088 L COG2963 orf, hypothetical protein 2168554..2169420 + 288 1788405 tra5_4 b2089 L COG2801 IS3 putative transposase 2169417..2169755 - 112 1788406 gatR_2 b2090 K COG1349 split galactitol utilization operon repressor, fragment 2 2169855..2170895 - 346 1788407 gatD b2091 E COG1063 galactitol-1-phosphate dehydrogenase 2170943..2172298 - 451 1788408 gatC b2092 - - PTS system galactitol-specific enzyme IIC 2172302..2172586 - 94 1788409 gatB b2093 - - galactitol-specific enzyme IIB of phosphotransferase system 2172617..2173069 - 150 1788410 gatA b2094 G COG1762 galactitol-specific enzyme IIA of phosphotransferase system 2173079..2174341 - 420 1788411 gatZ b2095 - - putative tagatose 6-phosphate kinase 1 2174370..2175230 - 286 1788412 gatY b2096 G COG0191 tagatose-bisphosphate aldolase 1 2175532..2176656 - 374 1788414 b2097 b2097 G COG1830 orf, hypothetical protein 2176841..2178118 + 425 1788415 yegT b2098 G COG0477 putative nucleoside permease protein 2178115..2179119 + 334 1788416 b2099 b2099 O COG1397 orf, hypothetical protein 2179116..2180081 + 321 1788417 b2100 b2100 G COG0524 putative kinase 2180055..2180801 - 248 1788418 yegW b2101 K COG2188 putative transcriptional regulator 2180853..2181680 - 275 1788419 yegX b2102 - - orf, hypothetical protein 2181736..2182536 - 266 1788420 thiD b2103 H COG0351 phosphomethylpyrimidine kinase 2182533..2183321 - 262 1788421 thiM b2104 H COG2145 hydoxyethylthiazole kinase 2183544..2183816 - 90 1788422 yohL b2105 S COG1937 orf, hypothetical protein 2183937..2184761 + 274 1788423 yohM b2106 S COG2215 orf, hypothetical protein 2184800..2185318 + 172 1788424 b2107 b2107 - - orf, hypothetical protein 2185400..2186434 - 344 1788426 yehA b2108 - - putative type-1 fimbrial protein 2186450..2188930 - 826 1788427 yehB b2109 N COG3188 putative outer membrane protein 2188946..2189665 - 239 1788428 yehC b2110 N COG3121 putative chaperone 2189700..2190242 - 180 1788429 yehD b2111 N COG3539 putative fimbrial-like protein 2190535..2190816 - 93 1788430 yehE b2112 - - orf, hypothetical protein 2191079..2192218 - 379 1788431 mrp b2113 D COG0489 putative ATPase 2192320..2194353 + 677 1788432 metG b2114 J COG0143 methionine tRNA synthetase 2194494..2195318 + 274 1788433 molR_1 b2115 - - molybdate metabolism regulator, first fragment 2195430..2197367 + 645 1788434 molR_2 b2116 - - molybdate metabolism regulator, second fragment 2 2197288..2198289 + 333 1788435 molR_3 b2117 - - molybdate metabolism regulator, third fragment 2198299..2201931 + 1210 1788436 yehI b2118 - - putative regulator 2202550..2203704 + 384 1788438 yehL b2119 R COG0714 orf, hypothetical protein 2203715..2205994 + 759 1788439 yehM b2120 - - orf, hypothetical protein 2205987..2207123 + 378 1788440 yehP b2121 - - orf, hypothetical protein 2207096..2208964 + 622 1788441 yehQ b2122 - - orf, hypothetical protein 2209233..2209706 + 157 1788442 yehR b2123 - - orf, hypothetical protein 2209746..2210216 - 156 1788443 yehS b2124 - - orf, hypothetical protein 2210263..2210997 - 244 2367130 yehT b2125 T COG3279 orf, hypothetical protein 2210979..2212664 - 561 1788446 yehU b2126 T COG3275 putative 2-component sensor protein 2212886..2213617 + 243 1788448 yehV b2127 K COG0789 putative transcriptional regulator 2213765..2214496 - 243 1788449 yehW b2128 E COG1174 putative transport system permease protein 2214501..2215427 - 308 1788450 yehX b2129 E COG1125 putative ATP-binding component of a transport system 2215420..2216577 - 385 1788451 yehY b2130 E COG1174 putative transport system permease protein 2216584..2217501 - 305 1788452 yehZ b2131 M COG1732 putative transport system permease protein 2217712..2220009 - 765 1788453 bglX b2132 G COG1472 beta-D-glucoside glucohydrolase, periplasmic 2220205..2221920 + 571 1788454 dld b2133 C COG0277 D-lactate dehydrogenase, FAD protein, NADH independent 2221958..2222899 - 313 1788455 pbpG b2134 M COG1686 penicillin-binding protein 7 2223064..2223675 - 203 1788457 yohC b2135 - - orf, hypothetical protein 2223785..2224399 + 204 1788458 yohD b2136 S COG0586 orf, hypothetical protein 2224529..2225290 - 253 1788459 yohF b2137 Q COG1028 putative oxidoreductase 2225343..2226539 - 398 1788460 yohG b2138 M COG1538 putative channel/filament proteins 2226569..2226859 - 96 1788461 yohH b2139 - - orf, hypothetical protein 2227458..2228405 - 315 1788462 yohI b2140 R COG0042 putative regulator protein 2228644..2229042 + 132 1788463 yohJ b2141 R COG1380 orf, hypothetical protein 2229039..2229734 + 231 1788464 yohK b2142 M COG1346 putative seritonin transporter 2229864..2230748 + 294 1788465 cdd b2143 F COG0295 cytidine/deoxycytidine deaminase 2230898..2231617 + 239 1788466 sanA b2144 S COG2949 vancomycin sensitivity 2231620..2231859 + 79 1788467 b2145 b2145 - - orf, hypothetical protein 2232053..2233291 + 412 1788468 b2146 b2146 E COG0493 putative oxidoreductase 2233279..2234520 + 413 1788469 yeiA b2147 C COG1146 putative oxidoreductase 2234763..2235773 - 336 1788471 mglC b2148 G COG1172 methyl-galactoside transport and galactose taxis 2235789..2237309 - 506 1788472 mglA b2149 G COG1129 ATP-binding component of methyl-galactoside transport and galactose taxis 2237370..2238368 - 332 1788473 mglB b2150 G COG1879 galactose-binding transport protein; receptor for galactose taxis 2238648..2239688 - 346 1788474 galS b2151 K COG1609 mgl repressor, galactose operon inducer 2239830..2240987 - 385 1788475 yeiB b2152 R COG2311 orf, hypothetical protein 2241004..2241672 - 222 1788476 folE b2153 H COG0302 GTP cyclohydrolase I 2241930..2242766 + 278 1788477 yeiG b2154 R COG0627 putative esterase (EC 3.1.1.-). 2242798..2244789 - 663 1788478 cirA b2155 P COG1629 outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product 2245083..2246552 - 489 1788480 lysP b2156 E COG0833 lysine-specific permease 2246757..2247638 - 293 1788481 yeiE b2157 K COG0583 putative transcriptional regulator LYSR-type 2247737..2248786 + 349 1788482 yeiH b2158 S COG2855 orf, hypothetical protein 2248860..2249717 + 285 1788483 nfo b2159 L COG0648 endonuclease IV 2249720..2250808 + 362 1788484 yeiI b2160 K COG2771 putative kinase 2250915..2252165 - 416 1788485 yeiJ b2161 F COG1972 putative transport system permease protein 2252265..2253206 - 313 1788486 yeiK b2162 F COG1957 orf, hypothetical protein 2253375..2254034 + 219 1788487 yeiL b2163 T COG0664 putative transcriptional regulator 2254105..2255355 - 416 1788488 yeiM b2164 F COG1972 putative transport system permease protein 2255449..2256387 - 312 1788490 yeiN b2165 Q COG2313 orf, hypothetical protein 2256375..2257316 - 313 1788491 yeiC b2166 G COG0524 putative kinase 2257739..2259430 - 563 1788492 fruA b2167 G COG1299 PTS system, fructose-specific transport protein 2259447..2260385 - 312 1788493 fruK b2168 G COG1105 fructose-1-phosphate kinase 2260385..2261515 - 376 1788494 fruB b2169 G COG1925 PTS system, fructose-specific IIA/fpr component 2261883..2263064 + 393 1788495 yeiO b2170 G COG0477 putative transport 2263215..2264042 + 275 1788496 yeiP b2171 J COG0231 putative elongation factor 2264265..2265731 + 488 1788497 yeiQ b2172 G COG0246 putative oxidoreductase 2265849..2266835 + 328 1788499 yeiR b2173 R COG0523 orf, hypothetical protein 2266838..2267587 + 249 1788500 b2174 b2174 I COG0671 orf, hypothetical protein 2267999..2268565 + 188 1788501 spr b2175 M COG0791 putative lipoprotein 2268746..2270302 + 518 1788502 rtn b2176 T COG2200 orf, hypothetical protein 2270378..2272198 + 606 1788503 yejA b2177 E COG0747 orf, hypothetical protein 2272199..2273293 + 364 1788504 yejB b2178 E COG0601 putative transport system permease protein 2273293..2274318 + 341 1788505 yejE b2179 E COG1173 putative transport system permease protein 2274320..2275909 + 529 1788506 yejF b2180 R COG1123 putative ATP-binding component of a transport system 2275913..2276257 - 114 1788507 yejG b2181 - - orf, hypothetical protein 2276590..2277780 - 396 1788509 bcr b2182 G COG0477 bicyclomycin resistance protein; transmembrane protein 2277808..2278503 - 231 1788510 rsuA b2183 J COG1187 16S pseudouridylate 516 synthase 2278652..2280412 + 586 1788511 yejH b2184 L COG1061 putative ATP-dependent helicase 2280537..2280821 + 94 1788512 rplY b2185 J COG1825 50S ribosomal subunit protein L25 2280960..2281967 - 335 1788513 yejK b2186 R COG3081 orf, hypothetical protein 2282149..2282376 + 75 1788514 yejL b2187 S COG3082 orf, hypothetical protein 2282396..2284156 + 586 1788515 yejM b2188 R COG3083 putative sulfatase 2284410..2286920 - 836 1788516 yejO b2190 - - putative ATP-binding component of a transport system 2286925..2287047 + 40 1788517 b2191 b2191 - - orf, hypothetical protein 2287085..2288101 - 338 1788518 trs5_8 b2192 L COG3039 IS5 transposase 2288520..2289167 + 215 1788521 narP b2193 T COG2197 nitrate/nitrite response regulator (sensor NarQ) 2289378..2290430 - 350 1788522 ccmH b2194 R COG0457 possible subunit of heme lyase 2290427..2290984 - 185 1788523 dsbE b2195 O COG0526 disulfide oxidoreductase (in biogenesis of cytochrome c? 2290981..2292924 - 647 1788524 ccmF b2196 O COG1138 cytochrome c-type biogenesis protein 2292921..2293400 - 159 1788525 ccmE b2197 O COG2332 cytochrome c biogenesis, possible subunit of a heme lyase 2293397..2293606 - 69 1788526 ccmD b2198 N COG3114 heme exporter protein C 2293603..2294340 - 245 1788527 ccmC b2199 O COG0755 heme exporter protein C 2294382..2295044 - 220 1788528 ccmB b2200 O COG2386 heme exporter protein B, cytochrome c-type biogenesis protein 2295041..2295658 - 205 1788529 ccmA b2201 Q COG1131 ATP binding protein of heme exporter A 2295677..2296279 - 200 1788530 napC b2202 C COG3005 cytochrome c-type protein 2296289..2296759 - 156 1788531 napB b2203 C COG3043 cytochrome c-type protein 2296735..2297598 - 287 1788532 napH b2204 C COG0348 ferredoxin-type protein: electron transfer 2297585..2298280 - 231 1788533 napG b2205 C COG1145 ferredoxin-type protein: electron transfer 2298287..2300773 - 828 1788534 napA b2206 C COG0243 probable nitrate reductase 3 2300770..2301033 - 87 1788535 napD b2207 P COG3062 orf, hypothetical protein 2301023..2301517 - 164 1788536 napF b2208 C COG1145 ferredoxin-type protein: electron transfer 2301925..2302413 + 162 1788538 eco b2209 - - ecotin, a serine protease inhibitor 2303128..2304774 - 548 1788539 yojH b2210 R COG0579 orf, hypothetical protein 2304992..2306635 - 547 1788540 yojI b2211 Q COG1132 putative ATP-binding component of a transport system 2306711..2307361 - 216 1788541 alkB b2212 L COG3145 DNA repair system specific for alkylated DNA 2307361..2308425 - 354 1788542 ada b2213 L COG0350 O6-methylguanine-DNA methyltransferase; transcription activator/repressor 2308499..2309554 - 351 1788543 yojL b2214 H COG1477 orf, hypothetical protein 2309666..2310769 - 367 1788544 ompC b2215 M COG3203 outer membrane protein 1b (Ib;c) 2311508..2314180 + 890 1788545 yojN b2216 T COG2198 putative 2-component sensor protein 2314197..2314847 + 216 1788546 rcsB b2217 T COG2197 positive response regulator for colanic capsule biosynthesis, (sensor, RcsC) 2315047..2317848 - 933 1788548 rcsC b2218 T COG0784 sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB 2318063..2319889 + 608 1788549 atoS b2219 T COG2202 sensor protein AtoS for response regulator AtoC 2319886..2321271 + 461 1788550 atoC b2220 T COG2204 response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS) 2321467..2322129 + 220 1788551 atoD b2221 I COG1788 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit 2322129..2322779 + 216 1788552 atoA b2222 I COG2057 acetyl-CoA:acetoacetyl-CoA transferase beta subunit 2322776..2324098 + 440 1788553 atoE b2223 I COG2031 short chain fatty acid transporter 2324129..2325313 + 394 1788554 atoB b2224 I COG0183 acetyl-CoA acetyltransferase 2325387..2326163 - 258 1788556 b2225 b2225 - - orf, hypothetical protein 2326168..2327817 - 549 1788557 b2226 b2226 - - orf, hypothetical protein 2327818..2328303 - 161 1788558 b2227 b2227 - - orf, hypothetical protein 2328319..2332332 - 1337 1788559 b2228 b2228 - - putative membrane protein 2332356..2333006 - 216 1788560 b2229 b2229 S COG3234 orf, hypothetical protein 2332976..2334712 - 578 1788561 yfaA b2230 - - orf, hypothetical protein 2334813..2337440 - 875 1788562 gyrA b2231 L COG0188 DNA gyrase, subunit A, type II topoisomerase 2337587..2338309 + 240 1788564 ubiG b2232 H COG2227 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase 2338437..2342189 - 1250 1788565 yfaL b2233 M COG3468 putative ATP-binding component of a transport system 2342885..2345170 + 761 2367133 nrdA b2234 F COG0209 ribonucleoside diphosphate reductase 1, alpha subunit, B1 2345404..2346534 + 376 1788567 nrdB b2235 F COG0208 ribonucleoside-diphosphate reductase 1, beta subunit, B2 2346534..2346788 + 84 1788568 yfaE b2236 C COG0633 orf, hypothetical protein 2346842..2347492 - 216 1788569 inaA b2237 - - pH-inducible protein involved in stress response 2347707..2347913 + 68 1788571 yfaH b2238 - - orf, hypothetical protein 2347955..2349031 - 358 1788572 glpQ b2239 C COG0584 glycerophosphodiester phosphodiesterase, periplasmic 2349036..2350394 - 452 1788573 glpT b2240 G COG2271 sn-glycerol-3-phosphate permease 2350667..2352295 + 542 1788574 glpA b2241 C COG0578 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit 2352285..2353544 + 419 1788575 glpB b2242 E COG3075 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit 2353541..2354731 + 396 1788576 glpC b2243 C COG0247 sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit 2354924..2355823 + 299 1788577 yfaD b2244 - - orf, hypothetical protein 2356062..2356865 - 267 1788578 b2245 b2245 G COG0469 orf, hypothetical protein 2356883..2358211 - 442 1788579 b2246 b2246 G COG0477 putative transport protein 2358229..2359446 - 405 1788580 b2247 b2247 H COG1441 putative racemase 2359449..2360231 - 260 1788581 b2248 b2248 K COG1414 putative regulator 2360451..2361653 - 400 1788583 b2249 b2249 R COG1058 orf, hypothetical protein 2361753..2362316 - 187 1788584 b2250 b2250 - - orf, hypothetical protein 2362574..2362999 + 141 1788585 yfaO b2251 L COG0494 orf, hypothetical protein 2363038..2363640 - 200 1788586 ais b2252 - - protein induced by aluminum 2363915..2365087 + 390 1788587 b2253 b2253 M COG0399 putative enzyme 2365091..2366059 + 322 1788588 b2254 b2254 M COG0463 putative sugar transferase 2366059..2368041 + 660 1788589 b2255 b2255 M COG0451 putative transformylase 2368038..2368928 + 296 1788590 b2256 b2256 - - orf, hypothetical protein 2368928..2370580 + 550 1788591 b2257 b2257 M COG1807 orf, hypothetical protein 2370630..2371298 + 222 1788592 b2258 b2258 - - putative transport/receptor protein 2371292..2371588 - 98 1788593 pmrD b2259 - - polymyxin resistance protein B 2371668..2373023 - 451 1788595 menE b2260 I COG0318 o-succinylbenzoate-CoA ligase 2373020..2373982 - 320 1788596 menC b2261 H COG1441 o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA 2373982..2374839 - 285 1788597 menB b2262 H COG0447 dihydroxynaphtoic acid synthetase 2374854..2375612 - 252 1788598 yfbB b2263 R COG0596 putative enzyme 2375609..2377279 - 556 1788599 menD b2264 H COG1165 2-oxoglutarate decarboxylase; SHCHC synthase 2377368..2378438 - 356 1788600 menF b2265 H COG1169 isochorismate hydroxymutase 2, menaquinone biosynthesis 2378742..2379047 - 101 1788601 elaB b2266 - - orf, hypothetical protein 2379102..2379563 - 153 1788602 elaA b2267 R COG2153 orf, hypothetical protein 2379610..2380545 + 311 1788603 elaC b2268 R COG1234 orf, hypothetical protein 2380733..2381944 + 403 1788604 elaD b2269 - - putative sulfatase / phosphatase 2382015..2383742 - 575 1788606 yfbK b2270 R COG2304 orf, hypothetical protein 2383874..2384851 + 325 1788607 yfbL b2271 R COG2234 putative aminopeptidase 2384954..2385457 + 167 1788608 yfbM b2272 - - orf, hypothetical protein 2385730..2386446 - 238 1788609 yfbN b2273 - - orf, hypothetical protein 2386601..2387077 + 158 1788610 b2274 b2274 - - orf, hypothetical protein 2387133..2387984 + 283 1788611 b2275 b2275 - - orf, hypothetical protein 2388068..2389345 - 425 1788612 nuoN b2276 C COG1007 NADH dehydrogenase I chain N 2389532..2391061 - 509 1788613 nuoM b2277 C COG1008 NADH dehydrogenase I chain M 2391225..2393066 - 613 1788614 nuoL b2278 C COG1009 NADH dehydrogenase I chain L 2393063..2393365 - 100 1788615 nuoK b2279 C COG0713 NADH dehydrogenase I chain K 2393362..2393916 - 184 1788616 nuoJ b2280 C COG0839 NADH dehydrogenase I chain J 2393928..2394470 - 180 1788617 nuoI b2281 C COG1143 NADH dehydrogenase I chain I 2394485..2395462 - 325 1788618 nuoH b2282 C COG1005 NADH dehydrogenase I chain H 2395459..2398191 - 910 1788619 nuoG b2283 C COG1034 NADH dehydrogenase I chain G 2398238..2399575 - 445 1788620 nuoF b2284 C COG1894 NADH dehydrogenase I chain F 2399572..2400072 - 166 1788621 nuoE b2285 C COG1905 NADH dehydrogenase I chain E 2400075..2401877 - 600 1788622 nuoC b2286 C COG0649 NADH dehydrogenase I chain C, D 2401971..2402633 - 220 1788624 nuoB b2287 C COG0377 NADH dehydrogenase I chain B 2402649..2403092 - 147 1788625 nuoA b2288 C COG0838 NADH dehydrogenase I chain A 2403723..2404661 - 312 1788626 lrhA b2289 K COG0583 NADH dehydrogenase transcriptional regulator, LysR family 2405581..2406798 + 405 1788627 b2290 b2290 E COG0436 putative aminotransferase 2406882..2407481 + 199 1788628 b2291 b2291 R COG1896 putative alpha helix protein 2407540..2409372 - 610 1788629 yfbS b2292 P COG0471 putative transport protein 2409459..2410127 - 222 1788630 yfbT b2293 R COG0637 putative phosphatase 2410120..2410632 - 170 1788631 b2294 b2294 S COG3013 orf, hypothetical protein 2410697..2411152 - 151 1788632 b2295 b2295 S COG3092 orf, hypothetical protein 2411490..2412692 + 400 1788633 ackA b2296 C COG0282 acetate kinase 2412767..2414911 + 714 1788635 pta b2297 C COG0280 phosphotransacetylase 2415080..2416621 + 513 1788636 yfcC b2298 S COG1288 putative S-transferase 2416654..2417196 - 180 1788637 b2299 b2299 L COG0494 putative regulator 2417254..2417808 - 184 1788638 yfcE b2300 R COG0622 orf, hypothetical protein 2417861..2418505 - 214 1788639 yfcF b2301 - - orf, hypothetical protein 2418641..2419288 + 215 1788640 yfcG b2302 O COG0625 putative S-transferase 2419345..2419707 + 120 1788641 folX b2303 H COG1539 D-erythro-7,8-dihydroneopterin tri P epimerase 2419728..2420621 + 297 1788642 b2304 b2304 R COG1090 putative sugar nucleotide epimerase 2420669..2421559 - 296 1788643 yfcI b2305 - - orf, hypothetical protein 2421756..2422529 - 257 1788644 hisP b2306 E COG1126 ATP-binding component of histidine transport 2422537..2423253 - 238 1788645 hisM b2307 E COG0765 histidine transport, membrane protein M 2423250..2423936 - 228 1788646 hisQ b2308 E COG0765 histidine transport system permease protein 2424026..2424808 - 260 1788648 hisJ b2309 E COG0834 histidine-binding periplasmic protein of high-affinity histidine transport system 2425029..2425811 - 260 1788649 argT b2310 E COG0834 lysine-, arginine-, ornithine-binding periplasmic protein 2426077..2426646 - 189 1788650 ubiX b2311 H COG0163 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2426741..2428258 - 505 1788651 purF b2312 F COG0034 amidophosphoribosyltransferase = PRPP amidotransferase 2428295..2428783 - 162 1788652 cvpA b2313 R COG1286 membrane protein required for colicin V production 2429042..2429677 - 211 1788653 dedD b2314 S COG3147 putative lipoprotein 2429694..2430962 - 422 1788654 folC b2315 H COG0285 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase 2431032..2431946 - 304 1788655 accD b2316 I COG0777 acetylCoA carboxylase, carboxytransferase component, beta subunit 2432102..2432761 - 219 1788656 dedA b2317 S COG0586 orf, hypothetical protein 2432844..2433656 - 270 1788657 truA b2318 J COG0101 pseudouridylate synthase I 2433656..2434669 - 337 1788658 usg b2319 E COG0136 putative PTS system enzyme II A component 2434735..2435871 - 378 1788660 pdxB b2320 E COG0111 erythronate-4-phosphate dehyrogenase 2435970..2436965 + 331 1788661 div b2321 - - cell division protein 2436962..2438140 - 392 1788662 b2322 b2322 G COG0477 putative transport protein 2438405..2439625 - 406 1788663 fabB b2323 I COG0304 3-oxoacyl-[acyl-carrier-protein] synthase I 2439724..2441790 + 688 1788664 b2324 b2324 Q COG0500 putative peptidase 2441911..2442189 - 92 1788665 b2325 b2325 - - orf, hypothetical protein 2442223..2442771 - 182 1788666 b2326 b2326 S COG3101 putative transporting ATPase 2442771..2443580 - 269 1788667 yfcA b2327 R COG0730 putative structural protein 2443580..2444404 - 274 1788668 mepA b2328 - - murein DD-endopeptidase, penicillin-insensitive 2444408..2445493 - 361 1788669 aroC b2329 E COG0082 chorismate synthase 2445528..2446793 - 421 1788670 yfcB b2330 J COG2890 putative adenine-specific methylase 2446626..2447177 + 183 1788671 b2331 b2331 S COG2840 orf, hypothetical protein 2447248..2448084 - 278 1788673 b2332 b2332 - - orf, hypothetical protein 2448071..2448610 - 179 1788674 b2333 b2333 N COG3539 putative fimbrial-like protein 2448607..2449095 - 162 1788675 b2334 b2334 N COG3539 orf, hypothetical protein 2449092..2449604 - 170 1788676 b2335 b2335 N COG3539 putative fimbrial protein 2449604..2450356 - 250 1788677 yfcS b2336 - - putative chaperone 2450376..2451272 - 298 1788678 b2337 b2337 - - putative outer membrane protein 2451285..2453021 - 578 1788679 yfcU b2338 - - putative outer membrane protein 2453103..2453666 - 187 1788680 b2339 b2339 N COG3539 putative fimbrial-like protein 2454347..2454832 - 161 1788681 b2340 b2340 T COG2062 orf, hypothetical protein 2455035..2457179 - 714 1788682 b2341 b2341 I COG1024 putative enzyme 2457179..2458489 - 436 1788683 b2342 b2342 I COG0183 putative acyltransferase 2458670..2458978 - 102 1788685 b2343 b2343 - - orf, hypothetical protein 2459320..2460666 + 448 1788686 fadL b2344 I COG2067 transport of long-chain fatty acids; sensitivity to phage T2 2461032..2462090 + 352 1788687 b2345 b2345 - - orf, hypothetical protein 2462272..2463027 - 251 1788688 vacJ b2346 M COG2853 lipoprotein precursor 2463321..2464253 + 310 1788689 yfdC b2347 P COG2116 putative transport 2464565..2465722 + 385 1788690 intC b2349 L COG0582 putative prophage Sf6-like integrase 2465875..2466237 + 120 1788691 b2350 b2350 - - orf, hypothetical protein 2466234..2467154 + 306 1788692 b2351 b2351 M COG0463 putative glycan biosynthesis enzyme 2467151..2468482 + 443 1788693 b2352 b2352 - - putative ligase 2468781..2469125 + 114 1788695 b2353 b2353 - - orf, hypothetical protein 2469097..2469537 - 146 1788696 b2354 b2354 - - orf, hypothetical protein 2469564..2470082 - 172 1788697 yfdL b2355 - - putative RNA polymerase beta 2470132..2470440 - 102 1788698 yfdM b2356 - - orf, hypothetical protein 2470407..2470901 - 164 1788699 yfdN b2357 - - orf, hypothetical protein 2470898..2471266 - 122 1788700 yfdO b2358 - - orf, hypothetical protein 2471540..2471986 + 148 1788701 b2359 b2359 - - orf, hypothetical protein 2472052..2472876 + 274 1788702 b2360 b2360 - - orf, hypothetical protein 2472977..2473540 + 187 1788703 b2361 b2361 - - orf, hypothetical protein 2473531..2473893 + 120 1788704 b2362 b2362 - - orf, hypothetical protein 2473893..2474198 + 101 1788705 b2363 b2363 - - orf, hypothetical protein 2474714..2475649 - 311 1788706 dsdC b2364 K COG0583 D-serine dehydratase (deaminase) transcriptional activator 2475867..2477204 + 445 1788707 dsdX b2365 G COG2610 transport system permease (serine?) 2477222..2478550 + 442 1788708 dsdA b2366 E COG3048 D-serine dehydratase (deaminase) 2478658..2480196 - 512 1788710 emrY b2367 G COG0477 multidrug resistance protein Y 2480196..2481359 - 387 1788711 emrK b2368 Q COG1566 multidrug resistance protein K 2481775..2482389 + 204 1788712 evgA b2369 T COG2197 putative positive transcription regulator (sensor EvgS) 2482394..2485987 + 1197 1788713 evgS b2370 T COG2198 putative sensor for regulator EvgA 2486043..2487227 - 394 1788714 yfdE b2371 C COG1804 putative enzyme 2487262..2488206 - 314 1788715 b2372 b2372 R COG0679 putative receptor protein 2488276..2489970 - 564 1788716 b2373 b2373 E COG0028 putative enzyme 2490024..2491274 - 416 1788717 b2374 b2374 C COG1804 putative enzyme 2491787..2492422 - 211 1788719 b2375 b2375 - - orf, hypothetical protein 2492718..2492993 + 91 2367134 b2376 b2376 - - orf, hypothetical protein 2493070..2493312 - 80 1788720 b2377 b2377 - - orf, hypothetical protein 2493599..2494585 + 328 1788721 ddg b2378 N COG1560 putative heat shock protein 2495077..2496315 - 412 1788722 b2379 b2379 E COG0436 putative aminotransferase 2496691..2498388 + 565 1788723 b2380 b2380 T COG3275 putative sensor protein 2498403..2499137 + 244 1788724 b2381 b2381 T COG3279 putative 2-component transcriptional regulator 2499150..2500007 + 285 1788725 b2382 b2382 K COG2207 putative ARAC-type regulatory protein 2500010..2502505 - 831 1788726 b2383 b2383 G COG1762 putative PTS system enzyme IIA component, enzyme I 2502530..2503567 - 345 1788727 b2384 b2384 G COG1363 orf, hypothetical protein 2503567..2504652 - 361 1788728 b2385 b2385 E COG0006 putative peptidase 2504667..2505914 - 415 1788729 b2386 b2386 G COG1299 putative transport protein 2505936..2506262 - 108 1788730 b2387 b2387 G COG1445 putative PTS system enzyme IIB component 2506481..2507446 - 321 1788732 glk b2388 G COG0837 glucokinase 2507650..2508906 + 418 1788733 b2389 b2389 P COG0038 orf, hypothetical protein 2509021..2509347 + 108 1788734 b2390 b2390 - - orf, hypothetical protein 2509085..2509429 + 114 1788735 b2391 b2391 - - orf, hypothetical protein 2509488..2510726 - 412 1788736 b2392 b2392 P COG1914 putative transport system permease 2511062..2512264 + 400 1788737 nupC b2393 F COG1972 permease of transport system for 3 nucleosides 2512345..2513463 + 372 1788738 yi81_3 b2394 - - IS186 hypothetical protein 2513663..2515969 - 768 1788739 yfeA b2395 T COG2200 orf, hypothetical protein 2516472..2516831 + 119 1788741 yfeC b2398 - - orf, hypothetical protein 2516833..2517225 + 130 1788742 yfeD b2399 - - orf, hypothetical protein 2517277..2518692 - 471 1788743 gltX b2400 J COG0008 glutamate tRNA synthetase, catalytic subunit 2519613..2520497 - 294 2367136 xapR b2405 K COG0583 regulator for xapA 2520749..2522005 - 418 1788745 xapB b2406 G COG0477 xanthosine permease 2522065..2522898 - 277 1788746 xapA b2407 F COG0005 xanthosine phosphorylase 2523147..2523911 + 254 1788747 yfeN b2408 - - putative sugar hydrolase 2523950..2524876 - 308 1788748 yfeR b2409 K COG0583 putative transcriptional regulator LYSR-type 2524966..2525964 + 332 1788749 yfeH b2410 R COG0385 putative cytochrome oxidase 2526181..2528196 - 671 1788750 lig b2411 L COG0272 DNA ligase 2528267..2529253 - 328 1788752 zipA b2412 - - cell division protein involved in FtsZ ring 2529483..2530244 + 253 1788753 cysZ b2413 E COG2981 required for sulfate transport 2530429..2531400 + 323 1788754 cysK b2414 E COG0031 cysteine synthase A, O-acetylserine sulfhydrolase A 2531784..2532041 + 85 1788755 ptsH b2415 G COG1925 PTS system protein HPr 2532086..2533813 + 575 1788756 ptsI b2416 G COG1080 PEP-protein phosphotransferase system enzyme I 2533854..2534363 + 169 1788757 crr b2417 G COG2190 PTS system, glucose-specific IIA component 2534406..2535257 - 283 1788758 pdxK b2418 H COG2240 pyridoxal/pyridoxine/pyridoxamine kinase 2535362..2535736 + 124 1788759 yfeK b2419 - - orf, hypothetical protein 2535769..2536503 + 244 1788760 b2420 b2420 - - orf, hypothetical protein 2536692..2537603 - 303 2367138 cysM b2421 E COG0031 cysteine synthase B, O-acetylserine sulfhydrolase B 2537737..2538834 - 365 1788761 cysA b2422 P COG1118 ATP-binding component of sulfate permease A protein; chromate resistance 2538824..2539273 - 149 1788762 cysW b2423 - - sulfate transport system permease W protein 2539699..2540532 - 277 1788764 cysU b2424 P COG0555 sulfate, thiosulfate transport system permease T protein 2540532..2541548 - 338 1788765 cysP b2425 P COG1613 thiosulfate binding protein 2541852..2542709 - 285 1788766 ucpA b2426 Q COG1028 putative oxidoreductase 2542772..2543629 - 285 1788767 yfeT b2427 K COG1737 orf, hypothetical protein 2543793..2544689 + 298 1788768 yfeU b2428 R COG2103 putative regulator 2544693..2546117 + 474 1788769 b2429 b2429 G COG1264 putative PTS enzyme II 2546035..2547426 + 463 1788770 b2430 b2430 M COG1680 putative beta-lactamase 2547666..2548592 - 308 1788771 b2431 b2431 P COG2837 orf, hypothetical protein 2548661..2549236 - 191 1788772 b2432 b2432 - - orf, hypothetical protein 2549297..2549752 - 151 1788773 b2433 b2433 - - orf, hypothetical protein 2549733..2550269 - 178 1788774 b2434 b2434 R COG0456 orf, hypothetical protein 2550372..2551241 + 289 1788776 amiA b2435 M COG0860 N-acetylmuramoyl-l-alanine amidase I 2551245..2552144 + 299 1788777 hemF b2436 H COG0408 coproporphyrinogen III oxidase 2552150..2553202 - 350 1788778 yfeG b2437 K COG2207 putative ARAC-type regulatory protein 2553248..2553754 - 168 1788779 b2438 b2438 - - orf, hypothetical protein 2553761..2554420 - 219 1788780 b2439 b2439 - - orf, hypothetical protein 2554430..2555317 - 295 1788781 eutC b2440 - - ethanolamine ammonia-lyase, light chain 2555338..2556741 - 467 1788782 eutB b2441 - - ethanolamine ammonia-lyase, heavy chain 2556791..2558086 + 431 1788783 b2442 b2442 L COG0582 putative prophage integrase 2558277..2558918 + 213 1788784 b2443 b2443 - - orf, hypothetical protein 2559388..2559633 + 81 1788785 b2444 b2444 - - orf, hypothetical protein 2559630..2560013 + 127 1788786 b2445 b2445 - - orf, hypothetical protein 2560131..2560547 + 138 1788787 b2446 b2446 - - orf, hypothetical protein 2560544..2561137 + 197 1788788 b2447 b2447 - - orf, hypothetical protein 2561597..2561989 + 130 1788790 b2448 b2448 - - orf, hypothetical protein 2562000..2562392 + 130 1788791 b2449 b2449 - - orf, hypothetical protein 2562513..2563352 + 279 1788792 b2450 b2450 - - orf, hypothetical protein 2563501..2564904 - 467 1788793 b2451 b2451 - - orf, hypothetical protein 2564901..2566127 - 408 1788794 eutH b2452 - - ethanolamine utilization; homolog of Salmonella putative transport protein 2566344..2567558 - 404 1788795 eutG b2453 C COG1454 ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase 2567521..2568357 - 278 1788796 eutJ b2454 O COG0443 ethanolamine utilization; homolog of Salmonella gene 2568368..2569771 - 467 1788797 eutE b2455 C COG1012 ethanolamine utilization; similar to acetaldehyde dehydrogenase 2569783..2570070 - 95 1788798 cchB b2456 - - detox protein 2570177..2570512 - 111 1788799 cchA b2457 - - detox protein 2570509..2571525 - 338 1788800 eutI b2458 C COG0280 ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase 2571522..2572325 - 267 1788801 b2459 b2459 - - orf, hypothetical protein 2572322..2573023 - 233 1788802 b2460 b2460 - - orf, hypothetical protein 2572998..2573477 - 159 1788803 b2461 b2461 - - orf, hypothetical protein 2573490..2573897 - 135 1788804 b2462 b2462 - - orf, hypothetical protein 2574118..2576397 - 759 1788806 b2463 b2463 C COG0280 putative multimodular enzyme 2576686..2577636 + 316 1788807 talA b2464 G COG0176 transaldolase A 2577656..2579659 + 667 1788808 tktB b2465 G COG0021 transketolase 2 isozyme 2579754..2580797 - 347 1788809 b2466 b2466 - - orf, hypothetical protein 2580923..2581498 - 191 1788810 yffH b2467 L COG0494 orf, hypothetical protein 2581566..2583545 - 659 1788811 yffG b2468 E COG0493 putative oxidoreductase, Fe-S subunit 2583751..2585451 + 566 1788812 narQ b2469 T COG0642 sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL) 2585615..2588728 + 1037 1788814 acrD b2470 Q COG0841 sensitivity to acriflavine, integral membrane protein, possible efflux pump 2589267..2589623 + 118 1788815 yffB b2471 P COG1393 orf, hypothetical protein 2589627..2590754 + 375 1788816 dapE b2472 E COG0624 N-succinyl-diaminopimelate deacylase 2591092..2591814 - 240 1788817 ypfH b2473 R COG0400 orf, hypothetical protein 2591864..2593879 - 671 1788818 ypfI b2474 R COG1444 orf, hypothetical protein 2593894..2594757 - 287 1788819 b2475 b2475 R COG2321 orf, hypothetical protein 2594925..2595638 - 237 1788820 purC b2476 F COG0152 phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase 2595851..2596888 - 345 1788822 nlpB b2477 M COG3317 lipoprotein-34 2596902..2597780 - 292 1788823 dapA b2478 E COG0329 dihydrodipicolinate synthase 2597860..2598498 + 212 1788824 gcvR b2479 R COG2716 transcriptional regulation of gcv operon 2598498..2598968 + 156 1788825 bcp b2480 O COG1225 bacterioferritin comigratory protein 2599182..2599838 + 218 1788826 hyfA b2481 C COG1142 hydrogenase 4 Fe-S subunit 2599838..2601856 + 672 1788827 hyfB b2482 C COG0651 hydrogenase 4 membrane subunit 2601846..2602814 + 322 1788828 hyfC b2483 C COG0650 hydrogenase 4 membrane subunit 2602831..2604270 + 479 1788829 hyfD b2484 C COG1009 hydrogenase 4 membrane subunit 2604282..2604932 + 216 1788830 hyfE b2485 - - hydrogenase 4 membrane subunit 2604937..2606517 + 526 1788831 hyfF b2486 C COG0651 hydrogenase 4 membrane subunit 2606507..2608174 + 555 1788832 hyfG b2487 C COG3261 hydrogenase 4 subunit 2608184..2608729 + 181 1788833 hyfH b2488 C COG1143 hydrogenase 4 Fe-S subunit 2608726..2609484 + 252 1788834 hyfI b2489 C COG3260 hydrogenase 4 Fe-S subunit 2609414..2609890 + 158 1788835 b2490 b2490 - - putative protein processing element 2609941..2611932 + 663 1788836 hyfR b2491 T COG3604 putative 2-component regulator, interaction with sigma 54 2611954..2612802 + 282 1788837 focB b2492 P COG2116 probable formate transporter (formate channel 2) 2612840..2613901 - 353 1788838 perM b2493 R COG0628 putative permease 2614114..2615577 + 487 1788840 b2494 b2494 R COG0457 orf, hypothetical protein 2615598..2615957 + 119 1788841 b2495 b2495 P COG1393 putative oxidoreductase 2616095..2616841 - 248 1788842 b2496 b2496 L COG0593 putative DNA replication factor 2616891..2618180 - 429 1788843 uraA b2497 F COG2233 uracil transport 2618266..2618919 - 217 1788844 upp b2498 F COG0035 uracil phosphoribosyltransferase 2619217..2620254 + 345 1788845 purM b2499 F COG0150 phosphoribosylaminoimidazole synthetase = AIR synthetase 2620254..2620892 + 212 1788846 purN b2500 F COG0299 phosphoribosylglycinamide formyltransferase 1 2621064..2623130 + 688 1788847 ppk b2501 P COG0855 polyphosphate kinase 2623135..2624676 + 513 1788848 ppx b2502 F COG0248 exopolyphosphatase 2624715..2626958 - 747 1788849 b2503 b2503 T COG2200 putative cytochrome C-type biogenesis protein 2627310..2627501 + 63 1788851 b2504 b2504 - - orf, hypothetical protein 2627812..2628330 + 172 1788852 b2505 b2505 - - putative outer membrane lipoprotein 2628346..2628885 + 179 1788853 b2506 b2506 - - putative membrane protein 2628978..2630555 - 525 1788854 guaA b2507 F COG0518 GMP synthetase (glutamine-hydrolyzing) 2630624..2632090 - 488 1788855 guaB b2508 F COG0516 IMP dehydrogenase 2632252..2633622 + 456 1788856 xseA b2509 L COG1570 exonuclease VII, large subunit 2633619..2633870 - 83 1788857 b2510 b2510 - - orf, hypothetical protein 2633904..2635415 - 503 1788858 b2511 b2511 R COG1160 putative GTP-binding factor 2635494..2636672 - 392 1788859 b2512 b2512 S COG1520 putative dehydrogenase 2636683..2637303 - 206 1788860 b2513 b2513 S COG2976 orf, hypothetical protein 2637321..2638595 - 424 1788861 hisS b2514 J COG0124 histidine tRNA synthetase 2638706..2639824 - 372 1788863 gcpE b2515 M COG0821 orf, hypothetical protein 2639851..2640864 - 337 1788864 yfgA b2516 S COG1426 putative membrane protein 2641149..2642303 - 384 1788865 yfgB b2517 R COG0820 orf, hypothetical protein 2642453..2642884 - 143 1788866 ndk b2518 F COG0105 nucleoside diphosphate kinase 2643033..2645345 - 770 1788867 pbpC b2519 M COG0744 putative peptidoglycan enzyme 2645346..2650307 - 1653 1788868 b2520 b2520 R COG2373 orf, hypothetical protein 2650355..2651359 + 334 1788869 sseA b2521 P COG2897 putative thiosulfate sulfurtransferase 2652177..2652962 - 261 1788871 sseB b2522 - - enhanced serine sensitivity 2653095..2654465 - 456 1788872 pepB b2523 E COG0260 putative peptidase 2654556..2654756 - 66 1788873 yfhJ b2524 S COG2975 orf, hypothetical protein 2654768..2655103 - 111 1788874 fdx b2525 C COG0633 [2FE-2S] ferredoxin, electron carrer protein 2655105..2656955 - 616 1788875 hscA b2526 O COG0443 heat shock protein, chaperone, member of Hsp70 protein family 2656972..2657487 - 171 1788876 yfhE b2527 O COG1076 orf, hypothetical protein 2657583..2657906 - 107 1788877 yfhF b2528 S COG0316 putative regulator 2657923..2658309 - 128 1788878 b2529 b2529 C COG0822 orf, hypothetical protein 2658337..2659575 - 412 1788879 yfhO b2530 E COG1104 putative aminotransferase 2659663..2660151 - 162 1788880 b2531 b2531 K COG1959 orf, hypothetical protein 2660603..2661343 - 246 1788881 b2532 b2532 J COG0565 putative ATP synthase beta subunit 2661462..2662265 + 267 1788882 suhB b2533 G COG0483 enhances synthesis of sigma32 in mutant; extragenic suppressor, may modulate RNAse III lethal action 2662383..2663264 + 293 1788884 b2534 b2534 R COG1073 putative enzyme (3.4.-) 2663434..2664735 + 433 1788885 csiE b2535 - - orf, hypothetical protein 2664727..2665866 - 379 1788886 hcaT b2536 G COG0477 MFS (major facilitator superfamily) transporter 2666026..2666916 - 296 1788887 hcaR b2537 K COG0583 transcriptional activator of hca cluster 2667052..2668413 + 453 1788888 hcaA1 b2538 P COG2146 large terminal subunit of phenylpropionate dioxygenase 2668410..2668928 + 172 1788889 hcaA2 b2539 - - small terminal subunit of phenylpropionate dioxygenase 2668928..2669248 + 106 1788890 hcaC b2540 P COG2146 ferredoxin subunit of phenylpropionate dioxygenase 2669245..2670057 + 270 1788891 hcaB b2541 Q COG1028 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2670067..2671269 + 400 1788892 hcaD b2542 R COG0446 ferredoxin reductase subunit of phenylpropionate dioxygenase 2671294..2671788 + 164 1788893 yphA b2543 S COG2259 orf, hypothetical protein 2671836..2672708 - 290 1788894 yphB b2544 G COG2017 orf, hypothetical protein 2672720..2673814 - 364 1788895 yphC b2545 E COG1063 putative oxidoreductase 2673847..2674845 - 332 1788896 yphD b2546 G COG1172 putative transport system permease protein 2674870..2676381 - 503 1788897 yphE b2547 G COG1129 putative ATP-binding component of a transport system 2676404..2677387 - 327 1788898 yphF b2548 G COG1879 putative LACI-type transcriptional regulator 2677484..2680858 - 1124 1788900 yphG b2549 - - orf, hypothetical protein 2680877..2682076 + 399 1788901 yphH b2550 K COG1940 putative NAGC-like transcriptional regulator 2682274..2683527 - 417 1788902 glyA b2551 E COG0112 serine hydroxymethyltransferase 2683855..2685045 + 396 1788903 hmpA b2552 C COG1017 dihydropteridine reductase, ferrisiderophore reductase activity 2685090..2685428 - 112 1788904 glnB b2553 E COG0347 regulatory protein P-II for glutamine synthetase 2685489..2686823 - 444 1788905 yfhA b2554 T COG2204 putative 2-component transcriptional regulator 2686813..2687526 - 237 1788906 yfhG b2555 - - putative alpha helix protein 2687691..2689181 - 496 1788908 yfhK b2556 T COG0642 putative 2-component sensor protein 2689676..2693563 - 1295 1788909 purL b2557 F COG0047 phosphoribosylformyl-glycineamide synthetase = FGAM synthetase 2693959..2695377 + 472 1788910 yfhD b2558 E COG0834 putative periplasmic binding transport protein 2695374..2695910 - 178 1788911 yfhC b2559 F COG0590 putative deaminase 2695935..2696507 - 190 1788912 yfhB b2560 - - orf, hypothetical protein 2696707..2697627 + 306 1788913 yfhH b2561 K COG1737 orf, hypothetical protein 2697683..2697943 + 86 1788914 yfhL b2562 C COG1145 orf, hypothetical protein 2698638..2699018 - 126 1788916 acpS b2563 I COG0736 CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase 2699018..2699749 - 243 1788917 pdxJ b2564 H COG0854 pyridoxine biosynthesis 2699761..2700489 - 242 2367140 recO b2565 L COG1381 protein interacts with RecR and possibly RecF proteins 2700501..2701406 - 301 1788919 era b2566 R COG1159 GTP-binding protein 2701403..2702083 - 226 1788920 rnc b2567 K COG0571 RNase III, ds RNA 2702355..2703329 - 324 1788921 lepB b2568 N COG0681 leader peptidase (signal peptidase I) 2703345..2705144 - 599 1788922 lepA b2569 N COG0481 GTP-binding elongation factor, may be inner membrane protein 2705342..2705821 - 159 1788923 rseC b2570 T COG3086 sigma-E factor, negative regulatory protein 2705818..2706774 - 318 1788924 rseB b2571 T COG3026 regulates activity of sigma-E factor 2706774..2707424 - 216 1788925 rseA b2572 T COG3073 sigma-E factor, negative regulatory protein 2707457..2708032 - 191 1788926 rpoE b2573 K COG1595 RNA polymerase, sigma-E factor; heat shock and oxidative stress 2708440..2710062 + 540 1788928 nadB b2574 H COG0029 quinolinate synthetase, B protein 2710047..2710904 - 285 1788929 yfiC b2575 Q COG0500 putative enzyme 2710916..2712250 + 444 1788930 srmB b2576 L COG0513 ATP-dependent RNA helicase 2712459..2713385 - 308 1788931 yfiE b2577 K COG0583 putative transcriptional regulator LYSR-type 2713443..2714030 + 195 1788932 yfiK b2578 E COG1280 orf, hypothetical protein 2714086..2714469 - 127 1788933 yfiD b2579 R COG3445 putative formate acetyltransferase 2714774..2715463 + 229 1788934 ung b2580 L COG0692 uracil-DNA-glycosylase 2715511..2716548 - 345 1788935 yfiF b2581 J COG0566 orf, hypothetical protein 2716755..2717174 + 139 1788936 trxC b2582 O COG0526 putative thioredoxin-like protein 2717219..2717941 + 240 1788937 yfiP b2583 - - orf, hypothetical protein 2717973..2720633 + 886 1788938 yfiQ b2584 C COG1042 orf, hypothetical protein 2720744..2722102 + 452 1788940 pssA b2585 I COG1502 phosphatidylserine synthase; phospholipid synthesis 2722199..2722471 + 90 1788941 yfiM b2586 - - orf, hypothetical protein 2722468..2723766 - 432 1788942 kgtP b2587 G COG0477 alpha-ketoglutarate permease 2729620..2732193 - 857 1788943 clpB b2592 O COG0542 heat shock protein 2732323..2733054 - 243 1788945 yfiH b2593 S COG1496 orf, hypothetical protein 2733051..2734031 - 326 1788946 sfhB b2594 J COG0564 suppressor of ftsH mutation 2734166..2734903 + 245 1788947 b2595 b2595 R COG0457 orf, hypothetical protein 2734933..2735139 + 68 1788948 b2596 b2596 - - orf, hypothetical protein 2735174..2735515 + 113 1788949 yfiA b2597 J COG1544 putative yhbH sigma 54 modulator 2735619..2735666 + 15 1788950 pheL b2598 - - leader peptide of chorismate mutase-P-prephenate dehydratase 2735765..2736925 + 386 1788951 pheA b2599 E COG1605 chorismate mutase-P and prephenate dehydratase 2736968..2738089 - 373 1788952 tyrA b2600 E COG0287 chorismate mutase-T and prephenate dehydrogenase 2738100..2739170 - 356 1788953 aroF b2601 E COG0722 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible) 2739341..2739745 + 134 1788954 yfiL b2602 - - orf, hypothetical protein 2739895..2740413 + 172 1788955 b2603 b2603 - - orf, hypothetical protein 2740403..2741629 + 408 1788956 yfiN b2604 T COG2199 orf, hypothetical protein 2741645..2742127 + 160 1788957 yfiB b2605 M COG2885 putative outer membrane protein 2742203..2742550 - 115 1788958 rplS b2606 J COG0335 50S ribosomal subunit protein L19 2742592..2743359 - 255 1788959 trmD b2607 J COG0336 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase 2743390..2743947 - 185 1788960 yfjA b2608 J COG0806 orf, hypothetical protein 2743957..2744205 - 82 1788961 rpsP b2609 J COG0228 30S ribosomal subunit protein S16 2744454..2745815 - 453 1788963 ffh b2610 N COG0541 GTP-binding export factor binds to signal sequence, GTP and RNA 2745907..2746773 + 288 1788964 b2611 b2611 O COG0755 orf, hypothetical protein 2746818..2747408 + 196 1788965 ypjE b2612 - - orf, hypothetical protein 2747398..2748081 + 227 1788966 yfjD b2613 - - putative transport protein 2748136..2748729 - 197 1788967 grpE b2614 O COG0576 phage lambda replication; host DNA synthesis; heat shock protein; protein repair 2748852..2749730 + 292 1788968 yfjB b2615 R COG0061 orf, hypothetical protein 2749816..2751477 + 553 1788969 recN b2616 L COG0497 protein used in recombination and DNA repair 2751815..2751967 + 50 1788970 smpA b2617 J COG2913 small membrane protein A 2752029..2752337 - 102 1788971 b2618 b2618 S COG2914 orf, hypothetical protein 2752309..2752785 - 158 1788972 b2619 b2619 I COG2867 orf, hypothetical protein 2752917..2753399 + 160 1788973 smpB b2620 O COG0691 small protein B 2754180..2755421 + 413 1788974 intA b2622 L COG0582 prophage CP4-57 integrase 2755665..2756621 - 318 1788976 yfjH b2623 - - putative histone 2756665..2756877 + 70 1788977 alpA b2624 K COG3311 prophage CP4-57 regulatory protein alpA 2757006..2758415 + 469 1788978 yfjI b2625 - - orf, hypothetical protein 2758568..2759194 + 208 1788979 yfjJ b2626 - - orf, hypothetical protein 2759372..2761561 - 729 1788980 yfjK b2627 L COG0513 orf, hypothetical protein 2761558..2763174 - 538 1788981 yfjL b2628 - - orf, hypothetical protein 2763534..2763797 - 87 1788982 yfjM b2629 - - orf, hypothetical protein 2763939..2765012 + 357 1788983 yfjN b2630 - - putative cell division protein 2765056..2765376 + 106 1788984 yfjO b2631 - - orf, hypothetical protein 2765725..2766594 + 289 1788986 yfjP b2632 - - putative GTP-binding protein 2766686..2767507 + 273 1788987 yfjQ b2633 - - orf, hypothetical protein 2767724..2768425 + 233 1788988 yfjR b2634 K COG2378 orf, hypothetical protein 2768310..2768702 + 130 2367144 b2635 b2635 - - orf, hypothetical protein 2768453..2769145 + 230 2367145 b2636 b2636 - - orf, hypothetical protein 2769169..2769636 + 155 1788990 yfjT b2637 - - orf, hypothetical protein 2769861..2770175 - 104 1788991 b2638 b2638 P COG1393 orf, hypothetical protein 2770188..2770706 - 172 1788992 b2639 b2639 - - putative pump protein 2770857..2771057 - 66 1788993 b2640 b2640 - - orf, hypothetical protein 2770997..2771113 - 38 1788994 b2641 b2641 - - orf, hypothetical protein 2771339..2773042 + 567 2367146 yfjW b2642 - - orf, hypothetical protein 2773940..2774398 + 152 1788996 yfjX b2643 - - orf, hypothetical protein 2774407..2774889 + 160 1788997 yfjY b2644 L COG2003 putative DNA repair protein 2775136..2775453 + 105 1788998 yfjZ b2645 - - orf, hypothetical protein 2775474..2775803 + 109 1788999 ypjF b2646 - - orf, hypothetical protein 2776167..2780876 - 1569 1789001 ypjA b2647 - - putative ATP-binding component of a transport system 2781085..2781228 - 47 1789002 b2648 b2648 - - orf, hypothetical protein 2781658..2782449 - 263 1789003 b2649 b2649 - - orf, hypothetical protein 2782549..2783031 - 160 1789004 b2650 b2650 - - orf, hypothetical protein 2783241..2783372 + 43 2367148 b2651 b2651 - - orf, hypothetical protein 2783820..2783993 - 57 1789006 b2653 b2653 - - orf, hypothetical protein 2784417..2784749 + 110 1789007 b2654 b2654 - - orf, hypothetical protein 2784768..2785262 + 164 1789008 b2655 b2655 - - orf, hypothetical protein 2785267..2785455 + 62 1789009 b2656 b2656 G COG0366 orf, hypothetical protein 2785627..2786259 + 210 1789010 b2657 b2657 G COG0366 putative enzyme 2786398..2786670 + 90 1789012 b2658 b2658 - - orf, hypothetical protein 2786901..2787983 + 360 1789013 b2659 b2659 - - orf, hypothetical protein 2787937..2789271 + 444 1789014 ygaF b2660 R COG0579 orf, hypothetical protein 2789294..2790742 + 482 1789015 gabD b2661 C COG1012 succinate-semialdehyde dehydrogenase, NADP-dependent activity 2790756..2792036 + 426 1789016 gabT b2662 E COG0160 4-aminobutyrate aminotransferase activity 2792274..2793674 + 466 1789017 gabP b2663 E COG1113 transport permease protein of gamma-aminobutyrate 2793677..2794357 + 226 1789018 ygaE b2664 K COG1802 putative transcriptional regulator 2794358..2794807 - 149 1789019 ygaU b2665 S COG1652 orf, hypothetical protein 2794891..2795049 - 52 1789020 b2666 b2666 S COG0401 orf, hypothetical protein 2795232..2795531 + 99 1789021 b2667 b2667 K COG0640 orf, hypothetical protein 2795541..2796065 + 174 1789022 ygaP b2668 P COG0607 orf, hypothetical protein 2796112..2796516 - 134 1789023 stpA b2669 R COG2916 DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing? 2797185..2797634 + 149 1789025 b2670 b2670 - - orf, hypothetical protein 2797671..2798015 - 114 1789026 ygaC b2671 - - orf, hypothetical protein 2798155..2798496 + 113 1789027 ygaM b2672 - - orf, hypothetical protein 2798744..2798989 + 81 1789028 nrdH b2673 O COG0695 glutaredoxin-like protein; hydrogen donor 2798986..2799396 + 136 1789029 nrdI b2674 F COG1780 orf, hypothetical protein 2799369..2801513 + 714 1789030 nrdE b2675 F COG0209 ribonucleoside-diphosphate reductase 2, alpha subunit 2801523..2802482 + 319 1789031 nrdF b2676 F COG0208 ribonucleoside-diphosphate reductase 2, beta chain, frag 2802836..2804038 + 400 1789032 proV b2677 E COG1125 ATP-binding component of transport system for glycine, betaine and proline 2804031..2805095 + 354 1789033 proW b2678 E COG1174 high-affinity transport system for glycine betaine and proline 2805153..2806145 + 330 1789034 proX b2679 E COG2113 high-affinity transport system for glycine betaine and proline 2806337..2806603 + 88 1789035 b2680 b2680 - - orf, hypothetical protein 2806597..2807514 + 305 1789036 b2681 b2681 - - putative transport protein 2807638..2808375 + 245 1789038 b2682 b2682 E COG1296 orf, hypothetical protein 2808365..2808700 + 111 1789039 ygaH b2683 - - orf, hypothetical protein 2808791..2809321 + 176 1789040 emrR b2684 K COG1846 regulator of plasmid mcrB operon (microcin B17 synthesis) 2809448..2810620 + 390 1789041 emrA b2685 Q COG1566 multidrug resistance secretion protein 2810637..2812175 + 512 1789042 emrB b2686 G COG0477 multidrug resistance; probably membrane translocase 2812239..2812754 - 171 1789043 ygaG b2687 T COG1854 orf, hypothetical protein 2812905..2814461 - 518 1789044 gshA b2688 H COG2918 gamma-glutamate-cysteine ligase 2814534..2814962 - 142 1789045 b2689 b2689 S COG1238 orf, hypothetical protein 2814959..2815525 - 188 1789046 yqaB b2690 R COG0637 putative phosphatase 2816983..2817168 - 61 1789047 csrA b2696 T COG1551 carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties 2817403..2820033 - 876 1789048 alaS b2697 J COG0013 alanyl-tRNA synthetase 2820162..2820662 - 166 1789050 oraA b2698 R COG2137 regulator, OraA protein 2820731..2821792 - 353 1789051 recA b2699 L COG0468 DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease 2821872..2822369 - 165 1789052 ygaD b2700 R COG1546 orf, hypothetical protein 2822514..2823599 - 361 1789053 mltB b2701 M COG2951 membrane-bound lytic murein transglycosylase B 2823855..2824418 + 187 1789054 srlA b2702 - - PTS system, glucitol/sorbitol-specific IIC component, one of two 2824415..2825374 + 319 1789055 srlE b2703 - - PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components 2825385..2825756 + 123 1789056 srlB b2704 - - PTS system, glucitol/sorbitol-specific enzyme IIA component 2825760..2826539 + 259 1789057 srlD b2705 Q COG1028 glucitol (sorbitol)-6-phosphate dehydrogenase 2826644..2827003 + 119 1789058 gutM b2706 - - glucitol operon activator 2827070..2827843 + 257 1789059 srlR b2707 K COG1349 regulator for gut (srl), glucitol operon 2827875..2828801 + 308 1789060 gutQ b2708 R COG0517 orf, hypothetical protein 2828798..2830387 - 529 2367150 ygaA b2709 T COG3604 putative 2-component transcriptional regulator 2830499..2831938 + 479 1789064 b2710 b2710 C COG1773 putative flavodoxin 2831935..2833068 + 377 1789065 ygbD b2711 R COG0446 putative oxidoreductase 2833196..2835448 - 750 2367152 hypF b2712 O COG0068 transcriptional regulatory protein 2835601..2836128 - 175 1789067 hydN b2713 C COG1142 involved in electron transport from formate to hydrogen, Fe-S centers 2836277..2837290 - 337 1789068 ascG b2714 K COG1609 ascBF operon repressor 2837547..2839004 + 485 1789069 ascF b2715 G COG1263 PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides 2839013..2840437 + 474 1789070 ascB b2716 G COG2723 6-phospho-beta-glucosidase; cryptic 2840596..2841066 - 156 1789072 hycI b2717 C COG0680 protease involved in processing C-terminal end of the large subunit of hydrogenase 3 2841059..2841469 - 136 1789073 hycH b2718 - - processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex) 2841466..2842233 - 255 1789074 hycG b2719 C COG3260 hydrogenase activity 2842233..2842775 - 180 1789075 hycF b2720 C COG1143 probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) 2842785..2844494 - 569 1789076 hycE b2721 C COG3261 large subunit of hydrogenase 3 (part of FHL complex) 2844512..2845435 - 307 1789077 hycD b2722 C COG0650 membrane-spanning protein of hydrogenase 3 (part of FHL complex) 2845438..2847264 - 608 2367154 hycC b2723 C COG0651 membrane-spanning protein of hydrogenase 3 (part of FHL complex) 2847261..2847872 - 203 1789079 hycB b2724 C COG1142 probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) 2847997..2848458 - 153 1789080 hycA b2725 - - transcriptional repression of hyc and hyp operons 2848670..2849020 + 116 1789081 hypA b2726 R COG0375 pleiotrophic effects on 3 hydrogenase isozymes 2849024..2849896 + 290 1789082 hypB b2727 O COG0378 guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3 2849887..2850159 + 90 1789083 hypC b2728 O COG0298 pleiotrophic effects on 3 hydrogenase isozymes 2850159..2851280 + 373 1789084 hypD b2729 O COG0409 pleiotrophic effects on 3 hydrogenase isozymes 2851319..2852287 + 322 1789085 hypE b2730 O COG0309 plays structural role in maturation of all 3 hydrogenases 2852361..2854439 + 692 1789087 fhlA b2731 T COG3604 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons 2854476..2854829 - 117 1789088 ygbA b2732 - - orf, hypothetical protein 2855116..2857677 + 853 1789089 mutS b2733 L COG0249 methyl-directed mismatch repair 2857783..2858439 + 218 1789090 pphB b2734 T COG0639 protein phosphatase 2 2858490..2859287 - 265 1789091 ygbI b2735 K COG1349 putative DEOR-type transcriptional regulator 2859453..2860361 + 302 1789092 b2736 b2736 I COG2084 putative dehydrogenase 2860358..2861524 + 388 1789093 b2737 b2737 S COG3395 orf, hypothetical protein 2861616..2862254 + 212 1789094 ygbL b2738 G COG0235 putative epimerase/aldolase 2862259..2863035 + 258 1789095 ygbM b2739 G COG3622 orf, hypothetical protein 2863124..2864488 + 454 1789097 b2740 b2740 G COG2610 putative transport protein 2864582..2865574 - 330 1789098 rpoS b2741 K COG0568 RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins 2865637..2866776 - 379 1789099 nlpD b2742 M COG0739 lipoprotein 2866916..2867542 - 208 1789100 pcm b2743 O COG2518 L-isoaspartate protein carboxylmethyltransferase type II 2867536..2868297 - 253 1789101 surE b2744 R COG0496 survival protein 2868278..2869327 - 349 1789102 ygbO b2745 S COG0585 putative hydrogenase subunit 2869324..2869803 - 159 1789103 ygbB b2746 I COG0245 orf, hypothetical protein 2869803..2870513 - 236 1789104 ygbP b2747 I COG1211 orf, hypothetical protein 2870532..2870843 - 103 1789105 b2748 b2748 O COG2919 orf, hypothetical protein 2871037..2871360 - 107 1789106 ygbE b2749 - - putative cytochrome oxidase subunit 2871410..2872015 - 201 1789107 cysC b2750 P COG0529 adenosine 5'-phosphosulfate kinase 2872015..2873442 - 475 1789108 cysN b2751 P COG2895 ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase 2873444..2874352 - 302 1789109 cysD b2752 E COG0175 ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2 2874604..2875641 + 345 1789111 iap b2753 R COG2234 alkaline phosphatase isozyme conversion, aminopeptidase 2876592..2876942 - 116 1789112 ygbF b2754 - - orf, hypothetical protein 2876878..2877795 - 305 1789113 b2755 b2755 S COG1518 orf, hypothetical protein 2877811..2878410 - 199 1789114 b2756 b2756 - - orf, hypothetical protein 2878397..2879077 - 226 1789115 b2757 b2757 - - orf, hypothetical protein 2879074..2880165 - 363 1789116 b2758 b2758 - - orf, hypothetical protein 2880178..2880660 - 160 1789117 ygcK b2759 - - orf, hypothetical protein 2880653..2882161 - 502 1789118 b2760 b2760 - - orf, hypothetical protein 2882576..2885242 - 888 1789119 ygcB b2761 R COG1203 orf, hypothetical protein 2885601..2886335 - 244 1789121 cysH b2762 E COG0175 3'-phosphoadenosine 5'-phosphosulfate reductase 2886410..2888122 - 570 1789122 cysI b2763 P COG0155 sulfite reductase, alpha subunit 2888122..2889921 - 599 1789123 cysJ b2764 P COG0369 sulfite reductase (NADPH), flavoprotein beta subunit 2890237..2890602 + 121 1789124 ygcM b2765 H COG0720 putative 6-pyruvoyl tetrahydrobiopterin synthase 2890650..2891951 + 433 1789125 ygcN b2766 C COG0644 orf, hypothetical protein 2891906..2892202 + 98 1789126 ygcO b2767 C COG2440 orf, hypothetical protein 2892219..2892794 + 191 1789127 ygcP b2768 K COG1954 putative anti-terminator regulatory protein 2892942..2893835 - 297 1789128 ygcQ b2769 C COG2025 putative flavoprotein 2893799..2894584 - 261 2367158 ygcR b2770 C COG2086 putative transport protein 2894556..2895965 - 469 1789130 ygcS b2771 G COG0477 putative transport protein 2895987..2896781 - 264 1789131 b2772 b2772 C COG0277 orf, hypothetical protein 2896784..2897440 - 218 2367159 ygcU b2773 C COG0277 putative oxidoreductase subunit 2897510..2898370 - 286 1789135 ygcW b2774 Q COG1028 putative oxidoreductase 2898614..2899891 + 425 2367161 yqcE b2775 G COG0477 putative transport protein 2899918..2901396 + 492 1789138 ygcE b2776 G COG1070 putative kinase 2902769..2903440 - 223 1789139 ygcF b2777 O COG0602 orf, hypothetical protein 2903664..2904605 + 313 1789140 ygcG b2778 R COG1512 orf, hypothetical protein 2904665..2905963 - 432 1789141 eno b2779 G COG0148 enolase 2906051..2907688 - 545 1789142 pyrG b2780 F COG0504 CTP synthetase 2907916..2908707 - 263 1789144 mazG b2781 R COG1694 orf, hypothetical protein 2908778..2909113 - 111 1789145 chpA b2782 T COG2337 probable growth inhibitor, PemK-like, autoregulated 2909113..2909361 - 82 1789146 chpR b2783 T COG2336 suppressor of inhibitory function of ChpA, PemI-like, autoregulated 2909439..2911673 - 744 1789147 relA b2784 T COG0317 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor 2911721..2913022 - 433 1789148 ygcA b2785 J COG2265 putative enzyme 2913079..2915835 + 918 1789149 barA b2786 T COG0642 sensor-regulator, activates OmpR by phophorylation 2916067..2917407 - 446 1789150 ygcX b2787 - - putative glucarate dehydratase 2917428..2918768 - 446 1789151 ygcY b2788 - - putative glucarate dehydratase 2918770..2920122 - 450 1789152 b2789 b2789 G COG0477 putative transport protein 2920557..2921006 - 149 1789154 b2790 b2790 C COG0716 orf, hypothetical protein 2921024..2921806 - 260 1789155 yqcB b2791 J COG0564 orf, hypothetical protein 2921806..2922135 - 109 1789156 b2792 b2792 S COG3098 orf, hypothetical protein 2922757..2923302 - 181 1789157 syd b2793 - - interacts with secY 2923370..2924218 + 282 1789158 yqcD b2794 R COG0780 orf, hypothetical protein 2924330..2925694 + 454 1789159 ygdH b2795 R COG1611 orf, hypothetical protein 2926251..2927540 + 429 1789160 sdaC b2796 E COG0814 probable serine transporter 2927598..2928965 + 455 1789161 sdaB b2797 E COG1760 L-serine dehydratase (deaminase), L-SD2 2928987..2929832 + 281 1789162 exo b2798 L COG0258 5'-3' exonuclease 2929887..2931038 - 383 1789163 fucO b2799 C COG1454 L-1,2-propanediol oxidoreductase 2931063..2931710 - 215 1789164 fucA b2800 G COG0235 L-fuculose-1-phosphate aldolase 2932257..2933573 + 438 1789166 fucP b2801 G COG0738 fucose permease 2933606..2935381 + 591 1789167 fucI b2802 G COG2407 L-fucose isomerase 2935460..2936908 + 482 1789168 fucK b2803 G COG1070 L-fuculokinase 2936910..2937332 + 140 1789169 fucU b2804 G COG1869 protein of fucose operon 2937390..2938121 + 243 1789170 fucR b2805 K COG1349 positive regulator of the fuc operon 2938165..2939265 - 366 1789171 ygdE b2806 R COG2933 orf, hypothetical protein 2939258..2939653 - 131 1789172 ygdD b2807 S COG2363 orf, hypothetical protein 2939672..2940589 - 305 1789173 gcvA b2808 K COG0583 positive regulator of gcv operon 2940940..2941170 - 76 1789174 b2809 b2809 - - orf, hypothetical protein 2941359..2942564 + 401 1789175 b2810 b2810 E COG0520 orf, hypothetical protein 2942564..2943007 + 147 1789176 ygdK b2811 R COG2166 orf, hypothetical protein 2943058..2943864 - 268 1789177 ygdL b2812 H COG1179 putative enzyme 2944103..2945200 - 365 1789179 mltA b2813 M COG2821 membrane-bound lytic murein transglycosylase A 2945779..2947122 - 447 1789180 b2817 b2817 M COG0860 putative amidase 2947264..2948595 + 443 1789181 argA b2818 E COG0548 N-acetylglutamate synthase; amino acid acetyltransferase 2948657..2950483 - 608 1789182 recD b2819 L COG0507 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease 2950483..2954025 - 1180 1789183 recB b2820 L COG1074 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease 2954018..2956906 - 962 2367164 ptr b2821 O COG1025 protease III 2957082..2960450 - 1122 1789186 recC b2822 L COG1330 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease 2960463..2960786 - 107 1789187 ppdC b2823 - - prepilin peptidase dependent protein C 2960771..2961136 - 121 1789188 ygdB b2824 - - orf, hypothetical protein 2961175..2961738 - 187 1789189 ppdB b2825 - - prepilin peptidase dependent protein B 2961729..2962199 - 156 1789190 ppdA b2826 - - prepilin peptidase dependent protein A 2962383..2963177 - 264 1789191 thyA b2827 F COG0207 thymidylate synthetase 2963184..2964059 - 291 1789192 lgt b2828 M COG0682 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid 2964210..2966456 - 748 1789193 ptsP b2829 T COG3605 PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins) 2966469..2966999 - 176 1789194 ygdP b2830 L COG0494 putative invasion protein 2967684..2968373 + 229 1789196 mutH b2831 L COG3066 methyl-directed mismatch repair 2968442..2969155 + 237 1789197 b2832 b2832 P COG0861 putative transport protein 2969293..2969511 + 72 1789198 b2833 b2833 - - orf, hypothetical protein 2969619..2970659 + 346 1789199 b2834 b2834 C COG0667 orf, hypothetical protein 2970691..2971884 - 397 1789200 ygeD b2835 G COG0477 putative resistance proteins 2971877..2974036 - 719 1789201 aas b2836 I COG0204 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase 2974621..2975652 + 343 1789202 galR b2837 K COG1609 repressor of galETK operon 2975659..2976921 - 420 1789203 lysA b2838 E COG0019 diaminopimelate decarboxylase 2977043..2977978 + 311 1789204 lysR b2839 K COG0583 positive regulator for lys 2977965..2978657 - 230 1789205 ygeA b2840 M COG1794 putative resistance proteins 2978786..2980204 - 472 1789207 araE b2841 G COG0477 low-affinity L-arabinose transport system proton symport protein 2980519..2981280 - 253 1789208 kduD b2842 Q COG1028 2-deoxy-D-gluconate 3-dehydrogenase 2981310..2982146 - 278 1789209 kduI b2843 - - homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase 2982433..2983617 - 394 1789210 yqeF b2844 I COG0183 putative acyltransferase 2983869..2985098 + 409 1789211 b2845 b2845 E COG0814 putative transporter protein 2985498..2986190 + 230 1789212 yqeH b2846 T COG2197 orf, hypothetical protein 2986524..2987333 + 269 1789213 yqeI b2847 K COG2771 putative sensory transducer 2987314..2987808 + 164 2367166 yqeJ b2848 - - orf, hypothetical protein 2987957..2988394 - 145 2367167 yqeK b2849 - - orf, hypothetical protein 2988576..2989022 + 148 2367169 ygeF b2850 - - orf, hypothetical protein 2989290..2989781 + 163 1789215 ygeG b2851 - - orf, hypothetical protein 2990116..2991492 + 458 1789216 ygeH b2852 T COG0745 putative invasion protein 2991660..2991878 + 72 1789217 b2853 b2853 - - orf, hypothetical protein 2992021..2992437 + 138 1789218 b2854 b2854 M COG0741 orf, hypothetical protein 2992482..2992928 - 148 1789219 ygeK b2855 K COG2771 putative 2-component transcriptional regulator 2992959..2993114 - 51 1789220 b2856 b2856 - - orf, hypothetical protein 2993336..2993767 - 143 1789221 b2857 b2857 - - orf, hypothetical protein 2993770..2993991 - 73 1789222 b2858 b2858 - - orf, hypothetical protein 2993984..2994409 - 141 1789223 b2859 b2859 - - orf, hypothetical protein 2994394..2995299 - 301 1789224 yi22_4 b2860 L COG2801 IS2 hypothetical protein 2995257..2995622 - 121 1789225 yi21_4 b2861 L COG2963 IS2 hypothetical protein 2995711..2996010 - 99 1789226 b2862 b2862 - - orf, hypothetical protein 2996056..2996892 - 278 1789227 b2863 b2863 - - orf, hypothetical protein 2997158..2997937 - 259 1789228 b2865 b2865 M COG0739 putative lipoprotein 2998367..3000625 + 752 1789230 b2866 b2866 C COG1529 orf, hypothetical protein 3000636..3001514 + 292 1789231 ygeT b2867 C COG1319 putative dehydrogenase 3001511..3001990 + 159 1789232 b2868 b2868 C COG2080 putative dehydrogenase 3002030..3003808 - 592 1789233 ygeV b2869 T COG2202 putative transcriptional regulator 3004356..3005447 + 363 1789234 ygeW b2870 E COG0078 putative carbamoyl transferase 3005531..3006727 + 398 1789235 ygeX b2871 E COG1171 putative dehydratase 3006785..3007996 + 403 1789236 ygeY b2872 E COG0624 putative deacetylase 3008037..3009434 + 465 1789237 b2873 b2873 F COG0044 orf, hypothetical protein 3009482..3010414 + 310 1789238 yqeA b2874 E COG0549 putative kinase 3010635..3012260 - 541 1789240 b2875 b2875 O COG1975 putative synthases 3012308..3013015 - 235 1789241 b2876 b2876 - - orf, hypothetical protein 3013181..3013759 + 192 1789242 ygfJ b2877 R COG2068 orf, hypothetical protein 3014081..3017179 + 1032 1789243 b2878 b2878 E COG0493 putative oxidoreductase, Fe-S subunit 3017116..3018510 + 464 1789244 b2879 b2879 F COG0402 putative proteoglycan 3018561..3019340 + 259 1789245 b2880 b2880 C COG1319 orf, hypothetical protein 3019337..3022207 + 956 1789246 b2881 b2881 C COG1529 putative dehydrogenase 3022315..3023772 + 485 1789248 ygfO b2882 F COG2233 putative transport protein 3023787..3025106 + 439 1789249 ygfP b2883 F COG0402 orf, hypothetical protein 3025142..3025711 + 189 1789250 ygfQ b2884 R COG2252 orf, hypothetical protein 3025678..3026508 + 276 1789251 ygfR b2885 R COG2252 putative oxidoreductase 3026544..3027035 - 163 1789252 ygfS b2886 C COG1142 putative oxidoreductase, Fe-S subunit 3027032..3028966 - 644 1789253 ygfT b2887 E COG0493 putative oxidoreductase, Fe-S subunit 3029318..3030835 + 505 1789254 ygfU b2888 F COG2233 putative permease 3031085..3031633 + 182 1789255 b2889 b2889 I COG1443 putative enzyme 3031677..3033194 - 505 1789256 lysS b2890 J COG1190 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA 3033204..3034302 - 365 2367172 prfB b2891 J COG1186 peptide chain release factor RF-2 3034393..3036126 - 577 1789259 recJ b2892 L COG0608 ssDNA exonuclease, 5' --> 3' specific 3036132..3036842 - 236 1789260 dsbC b2893 O COG1651 protein disulfide isomerase II 3036867..3037763 - 298 1789261 xerD b2894 L COG0582 site-specific recombinase 3037875..3038396 + 173 1789262 fldB b2895 C COG0716 flavodoxin 2 3038436..3038843 - 135 1789263 b2896 b2896 - - orf, hypothetical protein 3038824..3039090 - 88 1789264 ygfY b2897 S COG2938 orf, hypothetical protein 3039333..3040313 + 326 1789265 ygfZ b2898 R COG0354 orf, hypothetical protein 3040509..3041168 - 219 1789266 b2899 b2899 R COG1272 putative oxidoreductase 3041332..3041643 - 103 1789267 yqfB b2900 S COG3097 orf, hypothetical protein 3041682..3043121 + 479 2367174 bglA b2901 G COG2723 6-phospho-beta-glucosidase A; cryptic 3043178..3043921 - 247 2367175 ygfF b2902 Q COG1028 putative oxidoreductase 3044188..3047061 - 957 1789269 gcvP b2903 E COG1003 glycine decarboxylase, P protein of glycine cleavage system 3047180..3047569 - 129 1789271 gcvH b2904 E COG0509 in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor 3047593..3048687 - 364 1789272 gcvT b2905 E COG0404 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system 3049135..3050337 - 400 1789273 visC b2906 H COG0654 orf, hypothetical protein 3050360..3051538 - 392 1789274 ubiH b2907 H COG0654 2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone 3051535..3052860 - 441 1789275 pepP b2908 E COG0006 proline aminopeptidase P II 3052886..3053470 - 194 1789276 ygfB b2909 S COG3079 orf, hypothetical protein 3053632..3053961 + 109 1789277 ygfE b2910 S COG3027 orf, hypothetical protein 3054261..3054809 + 182 1789278 ygfA b2912 H COG0212 putative ligase 3055198..3056430 - 410 1789279 serA b2913 E COG0111 D-3-phosphoglycerate dehydrogenase 3056686..3057345 - 219 1789280 rpiA b2914 G COG0120 ribosephosphate isomerase, constitutive 3057401..3057631 - 76 1789281 yqfE b2915 - - orf, hypothetical protein 3057773..3058666 + 297 1789283 iciA b2916 K COG0583 replication initiation inhibitor, binds to 13-mers at oriC 3058870..3061014 + 714 1789284 sbm b2917 I COG2185 methylmalonyl-CoA mutase (MCM) 3061007..3062002 + 331 1789285 ygfD b2918 E COG1703 putative nucleotide-binding protein 3061971..3062798 + 275 1789286 ygfG b2919 I COG1024 putative enzyme 3062822..3064300 + 492 1789287 ygfH b2920 C COG0427 putative coenzyme A transferase 3064297..3065208 - 303 1789288 ygfI b2921 K COG0583 putative transcriptional regulator LYSR-type 3065360..3066100 - 246 1789289 yggE b2922 S COG2968 putative actin 3066193..3066828 - 211 1789290 yggA b2923 R COG1279 orf, hypothetical protein 3066967..3067827 - 286 1789291 yggB b2924 M COG0668 putative transport protein 3068185..3069264 - 359 1789293 fba b2925 G COG0191 fructose-bisphosphate aldolase, class II 3069479..3070642 - 387 1789294 pgk b2926 G COG0126 phosphoglycerate kinase 3070692..3071711 - 339 1789295 epd b2927 G COG0057 D-erythrose 4-phosphate dehydrogenase 3071996..3072709 - 237 1789296 yggC b2928 H COG1072 putative kinase 3072706..3073215 - 169 1789297 yggD b2929 - - putative transcriptional regulator 3073237..3074202 - 321 1789298 yggF b2930 G COG1494 orf, hypothetical protein 3074199..3075188 - 329 1789299 b2931 b2931 E COG1063 putative oxidoreductase 3075119..3075475 - 118 1789300 yggP b2932 E COG1063 orf, hypothetical protein 3075490..3076878 - 462 1789301 cmtA b2933 C COG2213 PTS system, mannitol-specific enzyme II component, cryptic 3076906..3077349 - 147 1789302 cmtB b2934 G COG1762 PTS system, mannitol-specific enzyme II component, cryptic 3077663..3079654 - 663 2367177 tktA b2935 G COG0021 transketolase 1 isozyme 3079806..3080690 + 294 1789305 yggG b2936 O COG0501 orf, hypothetical protein 3080896..3081816 - 306 1789306 speB b2937 E COG0010 agmatinase 3081954..3083930 - 658 1789307 speA b2938 E COG1166 biosynthetic arginine decarboxylase 3083939..3084085 - 48 1789308 yqgB b2939 - - orf, hypothetical protein 3084206..3084421 + 71 1789309 yqgC b2940 - - orf, hypothetical protein 3084418..3084669 - 83 1789310 yqgD b2941 - - orf, hypothetical protein 3084725..3085879 + 384 1789311 metK b2942 H COG0192 methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes 3086303..3087697 + 464 1789312 galP b2943 G COG0477 galactose-proton symport of transport system 3087774..3088271 + 165 1789313 sprT b2944 S COG3091 orf, hypothetical protein 3088366..3089073 + 235 1789314 endA b2945 L COG2356 DNA-specific endonuclease I 3089126..3089884 + 252 1789315 yggJ b2946 S COG1385 orf, hypothetical protein 3089897..3090847 + 316 1789316 gshB b2947 H COG0189 glutathione synthetase 3090884..3091519 + 211 1789317 yqgE b2948 K COG1678 orf, hypothetical protein 3091519..3091935 + 138 1789318 yqgF b2949 L COG0816 orf, hypothetical protein 3092119..3093144 - 341 1789320 yggR b2950 N COG2805 putative protein transport 3093117..3093821 + 234 1789321 yggS b2951 R COG0325 orf, hypothetical protein 3093839..3094405 + 188 1789322 yggT b2952 S COG0762 putative resistance protein 3094390..3094692 + 100 1789323 yggU b2953 S COG1872 orf, hypothetical protein 3094700..3095293 + 197 1789324 yggV b2954 F COG0127 putative ribosomal protein 3095286..3096422 + 378 1789325 yggW b2955 H COG0635 putative oxidase 3096577..3097584 - 335 1789326 yggM b2956 - - putative alpha helix chain 3097701..3098747 - 348 1789327 ansB b2957 E COG0252 periplasmic L-asparaginase II 3098923..3099642 - 239 1789328 yggN b2958 - - orf, hypothetical protein 3099825..3100181 - 118 1789329 yggL b2959 S COG3171 orf, hypothetical protein 3100151..3100870 - 239 1789330 yggH b2960 R COG0220 orf, hypothetical protein 3101031..3102083 + 350 1789331 mutY b2961 L COG1194 adenine glycosylase; G.C --> T.A transversions 3102111..3102386 + 91 1789332 yggX b2962 S COG2924 orf, hypothetical protein 3102448..3103530 + 360 2367180 mltC b2963 M COG0741 membrane-bound lytic murein transglycosylase C 3103684..3104988 + 434 1789336 nupG b2964 G COG0477 transport of nucleosides, permease protein 3105038..3107233 - 731 1789337 speC b2965 E COG1982 ornithine decarboxylase isozyme 3107570..3108277 + 235 1789338 yqgA b2966 R COG1811 putative transport protein 3108607..3109143 - 178 1789339 yghD b2968 N COG3149 putative secretion pathway protein 3109145..3110005 - 286 1789340 yghE b2969 N COG3297 putative general secretion pathway for protein export (GSP) 3110071..3110937 - 288 1789341 b2970 b2970 N COG3031 putative general secretion pathway for protein export (GSP) 3111084..3111494 - 136 1789342 b2971 b2971 - - orf, hypothetical protein 3111560..3112492 - 310 1789343 b2972 b2972 N COG1989 putative peptidase 3112567..3115113 - 848 1789345 b2973 b2973 - - orf, hypothetical protein 3115101..3117128 - 675 1789346 b2974 b2974 - - putative endoglucanase 3117613..3119295 - 560 1789347 yghK b2975 C COG1620 putative permease 3119650..3121821 - 723 1789348 glcB b2976 C COG2225 malate synthase G 3121843..3122247 - 134 1789349 glcG b2977 S COG3193 orf, hypothetical protein 3122252..3124537 - 761 1789350 glcF b2978 C COG0277 glycolate oxidase iron-sulfur subunit 3124537..3126036 - 499 1789351 glcD b2979 C COG0277 glycolate oxidase subunit D 3126287..3127051 + 254 1789353 glcC b2980 K COG2186 transcriptional activator for glc operon 3127058..3128230 - 390 1789354 b2981 b2981 - - orf, hypothetical protein 3128193..3129209 + 338 1789355 trs5_9 b2982 L COG3039 IS5 transposase 3129356..3130333 - 325 1789356 yghQ b2983 - - orf, hypothetical protein 3130469..3131227 - 252 1789357 yghR b2984 - - orf, hypothetical protein 3131259..3131972 - 237 1789358 yghS b2985 - - orf, hypothetical protein 3132146..3132838 + 230 1789359 yghT b2986 - - orf, hypothetical protein 3132887..3134386 - 499 1789360 pitB b2987 P COG0306 low-affinity phosphate transport 3134678..3136537 - 619 1789361 gsp b2988 E COG0754 glutathionylspermidine synthetase/amidase 3136694..3137608 + 304 1789363 b2989 b2989 O COG0625 orf, hypothetical protein 3137731..3137979 - 82 1789364 hybG b2990 O COG0298 hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2 3137992..3138333 - 113 1789365 hybF b2991 R COG0375 may modulate levels of hydrogenease-2 3138326..3138814 - 162 1789366 hybE b2992 - - member of hyb operon 3138807..3139301 - 164 1789367 hybD b2993 C COG0680 probable processing element for hydrogenase-2 3139301..3141004 - 567 1789368 hybC b2994 C COG0374 probable large subunit, hydrogenase-2 3141001..3142179 - 392 2367183 hybB b2995 - - probable cytochrome Ni/Fe component of hydrogenase-2 3142169..3143155 - 328 1789370 hybA b2996 C COG0437 hydrogenase-2 small subunit 3143158..3144276 - 372 1789371 b2997 b2997 C COG1740 putative hydrogenase subunit 3144465..3144752 - 95 1789372 b2998 b2998 - - orf, hypothetical protein 3144871..3145281 - 136 1789373 b2999 b2999 - - orf, hypothetical protein 3145281..3145706 - 141 1789374 b3000 b3000 - - orf, hypothetical protein 3145912..3146952 + 346 1789375 b3001 b3001 C COG0667 putative reductase 3146992..3147486 - 164 1789376 yqhA b3002 S COG2862 orf, hypothetical protein 3147677..3148561 + 294 1789378 yghA b3003 Q COG1028 putative oxidoreductase 3148737..3148982 + 81 1789379 b3004 b3004 - - orf, hypothetical protein 3148833..3149258 - 141 1789380 exbD b3005 N COG0848 uptake of enterochelin; tonB-dependent uptake of B colicins 3149265..3149999 - 244 1789381 exbB b3006 N COG0811 uptake of enterochelin; tonB-dependent uptake of B colicins 3149992..3150147 - 51 1789382 b3007 b3007 - - orf, hypothetical protein 3150251..3151438 + 395 1789383 metC b3008 E COG0626 cystathionine beta-lyase (beta-cystathionase) 3151578..3152237 + 219 1789384 yghB b3009 S COG0586 orf, hypothetical protein 3152276..3153403 - 375 1789385 yqhC b3010 K COG2207 putative ARAC-type regulatory protein 3153369..3154532 + 387 1789386 yqhD b3011 C COG1979 putative oxidoreductase 3154754..3155464 + 236 1789387 yqhE b3012 R COG0656 orf, hypothetical protein 3155664..3156593 + 309 2367185 yqhG b3013 - - orf, hypothetical protein 3156644..3156901 + 85 1789390 yqhH b3014 - - orf, hypothetical protein 3156944..3158185 - 413 1789391 b3015 b3015 - - orf, hypothetical protein 3158185..3159162 - 325 1789392 ygiR b3016 - - orf, hypothetical protein 3159273..3160685 - 470 1789394 sufI b3017 Q COG2132 suppressor of ftsI 3160760..3161497 - 245 1789395 plsC b3018 I COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 3161731..3163989 - 752 1789396 parC b3019 L COG0188 DNA topoisomerase IV subunit A 3164127..3165734 - 535 1789397 b3020 b3020 E COG0747 putative transport periplasmic protein 3165867..3166262 - 131 1789398 b3021 b3021 R COG0517 orf, hypothetical protein 3166264..3166560 - 98 1789399 b3022 b3022 - - orf, hypothetical protein 3166765..3167247 - 160 1789400 b3023 b3023 L COG3449 orf, hypothetical protein 3167300..3167692 - 130 1789401 ygiW b3024 S COG3111 orf, hypothetical protein 3167844..3168503 + 219 1789402 ygiX b3025 T COG0745 putative 2-component transcriptional regulator 3168500..3169849 + 449 1789403 ygiY b3026 T COG0642 putative 2-component sensor protein 3169895..3170227 - 110 1789404 b3027 b3027 - - orf, hypothetical protein 3170546..3171127 + 193 1789406 mdaB b3028 R COG2249 modulator of drug activity B 3171158..3171472 + 104 1789407 ygiN b3029 S COG1359 orf, hypothetical protein 3171520..3173412 - 630 1789408 parE b3030 L COG0187 DNA topoisomerase IV subunit B 3173441..3174022 - 193 1789409 yqiA b3031 R COG3150 orf, hypothetical protein 3174022..3174849 - 275 1789410 icc b3032 R COG1409 regulator of lacZ 3174874..3175296 - 140 1789411 yqiB b3033 S COG3151 putative enzyme 3175297..3175926 - 209 1789412 yqiE b3034 L COG0494 orf, hypothetical protein 3176125..3177612 + 495 1789413 tolC b3035 M COG1538 outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes 3177612..3177872 + 86 1789414 ygiA b3036 - - orf, hypothetical protein 3177727..3178431 + 234 1789415 ygiB b3037 - - orf, hypothetical protein 3178437..3179597 + 386 1789416 ygiC b3038 E COG0754 putative synthetase/amidase 3179635..3180450 - 271 1789417 ygiD b3039 S COG3384 orf, hypothetical protein 3180566..3181339 + 257 1789419 ygiE b3040 P COG0428 orf, hypothetical protein 3181829..3182482 - 217 1789420 ribB b3041 H COG0108 3,4 dihydroxy-2-butanone-4-phosphate synthase 3182796..3183146 + 116 1789421 b3042 b3042 S COG2960 orf, hypothetical protein 3183430..3183981 + 183 1789422 ygiL b3043 N COG3539 putative fimbrial-like protein 3184203..3184568 + 121 1789423 yi21_5 b3044 L COG2963 IS2 hypothetical protein 3184526..3185431 + 301 1789424 yi22_5 b3045 L COG2801 IS2 hypothetical protein 3185416..3187881 + 821 2367188 yqiG b3046 N COG3188 putative membrane protein 3187888..3188646 + 252 1789426 yqiH b3047 - - putative membrane protein 3188648..3189712 + 354 1789427 yqiI b3048 - - orf, hypothetical protein 3189755..3189955 - 66 1789428 glgS b3049 - - glycogen biosynthesis, rpoS dependent 3190224..3190853 + 209 1789429 b3050 b3050 - - putative oxidoreductase 3190880..3192541 + 553 1789430 b3051 b3051 S COG2268 putative membrane protein 3192961..3194394 - 477 1789432 b3052 b3052 M COG2870 putative kinase 3194442..3197282 - 946 1789433 glnE b3053 O COG1391 adenylylating enzyme for glutamine synthetase 3197305..3198606 - 433 1789434 ygiF b3054 S COG3025 orf, hypothetical protein 3198848..3199468 + 206 1789435 ygiM b3055 T COG3103 orf, hypothetical protein 3199532..3200770 + 412 1789436 cca b3056 J COG0617 tRNA nucleotidyl transferase 3200951..3201772 - 273 1789437 bacA b3057 S COG1968 bacitracin resistance; possibly phosphorylates undecaprenol 3201862..3202233 - 123 1789438 ygiG b3058 H COG1539 putative kinase 3202335..3202952 + 205 1789439 ygiH b3059 S COG0344 orf, hypothetical protein 3202965..3203897 - 310 1789440 ygiP b3060 K COG0583 putative transcriptional regulator LYSR-type 3204104..3205015 + 303 1789442 ttdA b3061 C COG1951 L-tartrate dehydratase, subunit A 3205012..3205617 + 201 1789443 ttdB b3062 C COG1838 L-tartrate dehydratase, subunit B 3205665..3207128 + 487 1789444 ygjE b3063 P COG0471 orf, hypothetical protein 3207171..3208184 - 337 1789445 ygjD b3064 O COG0533 putative O-sialoglycoprotein endopeptidase 3208422..3208637 + 71 1789446 rpsU b3065 J COG0828 30S ribosomal subunit protein S21 3208748..3210493 + 581 1789447 dnaG b3066 L COG0358 DNA biosynthesis; DNA primase 3210688..3212529 + 613 1789448 rpoD b3067 K COG0568 RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures 3212608..3213114 - 168 1789449 ygjF b3068 - - orf, hypothetical protein 3213368..3214132 - 254 1789450 yqjH b3070 P COG2375 orf, hypothetical protein 3214420..3215043 + 207 1789452 yqjI b3071 K COG1695 orf, hypothetical protein 3215197..3216717 - 506 1789453 aer b3072 N COG0840 aerotaxis sensor receptor, flavoprotein 3217024..3218514 + 496 1789454 ygjG b3073 E COG0160 probable ornithine aminotransferase 3218556..3218888 - 110 1789455 ygjH b3074 R COG0073 putative tRNA synthetase 3219107..3220090 + 327 1789456 ebgR b3075 K COG1609 regulator of ebg operon 3220238..3223366 + 1042 1789457 ebgA b3076 G COG3250 evolved beta-D-galactosidase, alpha subunit; cryptic gene 3223363..3223812 + 149 1789458 ebgC b3077 S COG2731 evolved beta-D-galactosidase, beta subunit; cryptic gene 3223875..3225308 + 477 1789459 ygjI b3078 E COG0531 putative oxidoreductase 3225442..3226512 + 356 1789461 ygjJ b3079 - - orf, hypothetical protein 3226529..3228880 + 783 1789462 ygjK b3080 - - putative isomerase 3229306..3231324 + 672 1789463 ygjL b3081 R COG0446 putative NADPH dehydrogenase 3231369..3231785 - 138 1789464 ygjM b3082 - - orf, hypothetical protein 3231782..3232096 - 104 1789465 ygjN b3083 - - orf, hypothetical protein 3232380..3233546 - 388 1789466 ygjO b3084 J COG2813 putative enzyme 3233565..3234104 + 179 1789467 ygjP b3085 R COG1451 orf, hypothetical protein 3234181..3234873 + 230 1789468 ygjQ b3086 S COG2949 orf, hypothetical protein 3234934..3235938 + 334 2367190 ygjR b3087 R COG0673 orf, hypothetical protein 3236222..3237187 + 321 1789472 ygjT b3088 P COG0861 putative transport protein 3237584..3238828 + 414 1789473 ygjU b3089 - - putative transport protein 3238833..3239384 - 183 1789474 ygjV b3090 - - orf, hypothetical protein 3239467..3240954 - 495 1789475 uxaA b3091 G COG2721 altronate hydrolase 3240969..3242381 - 470 2367192 uxaC b3092 G COG1904 uronate isomerase 3242744..3244162 + 472 2367193 exuT b3093 G COG0477 transport of hexuronates 3244277..3245068 + 263 1789480 exuR b3094 K COG2186 negative regulator of exu regulon, exuT, uxaAC, and uxuB 3245413..3246075 + 220 1789481 yqjA b3095 S COG0586 orf, hypothetical protein 3246079..3246462 + 127 1789482 yqjB b3096 - - orf, hypothetical protein 3246594..3246977 + 127 2367195 yqjC b3097 - - orf, hypothetical protein 3247015..3247320 + 101 1789485 yqjD b3098 - - orf, hypothetical protein 3247323..3247727 + 134 1789486 yqjE b3099 - - orf, hypothetical protein 3247717..3248016 + 99 1789487 b3100 b3100 - - orf, hypothetical protein 3248112..3248594 + 160 1789488 yqjF b3101 S COG2259 orf, hypothetical protein 3248664..3249650 + 328 1789489 yqjG b3102 O COG0435 putative transferase 3249944..3250309 + 121 2367196 yhaH b3103 S COG3152 putative cytochrome 3250551..3250907 + 118 1789491 yhaI b3104 S COG3152 putative cytochrome 3250958..3251854 - 298 1789492 yhaJ b3105 K COG0583 putative transcriptional regulator LYSR-type 3251959..3252660 + 233 1789493 yhaK b3106 R COG1741 orf, hypothetical protein 3252677..3252847 + 56 1789494 yhaL b3107 - - orf, hypothetical protein 3252981..3253547 - 188 1789495 yhaM b3108 - - orf, hypothetical protein 3253729..3254292 - 187 1789496 yhaN b3109 - - orf, hypothetical protein 3254320..3255597 - 425 1789497 yhaO b3110 E COG0814 putative transport system permease protein 3255928..3256755 - 275 1789498 yhaP b3111 E COG1760 putative L-serine dehydratase 3256875..3257297 - 140 1789500 yhaQ b3112 E COG1760 putative L-serine dehydratase 3257363..3257815 - 150 1789501 yhaR b3113 J COG0251 orf, hypothetical protein 3257819..3260059 - 746 1789502 tdcE b3114 C COG1882 probable formate acetyltransferase 3 3260093..3261313 - 406 1789503 tdcD b3115 C COG0282 putative kinase 3261327..3262658 - 443 1789504 tdcC b3116 E COG0814 anaerobically inducible L-threonine, L-serine permease 3262680..3263669 - 329 1789505 tdcB b3117 E COG1171 threonine dehydratase, catabolic 3263768..3264706 - 312 1789506 tdcA b3118 K COG0583 transcriptional activator of tdc operon 3264895..3265239 + 114 1789507 tdcR b3119 - - threonine dehydratase operon activator protein 3265474..3266034 + 186 1789508 yhaB b3120 - - orf, hypothetical protein 3266056..3267243 + 395 1789509 yhaC b3121 - - orf, hypothetical protein 3267304..3267468 + 54 1789511 b3122 b3122 - - orf, hypothetical protein 3268266..3269492 - 408 1789512 yhaD b3124 G COG1929 orf, hypothetical protein 3269508..3270407 - 299 1789513 yhaE b3125 I COG2084 putative dehydrogenase 3270428..3271198 - 256 1789514 yhaF b3126 G COG0469 orf, hypothetical protein 3271214..3272548 - 444 1789515 yhaU b3127 G COG0477 putative transport protein 3272923..3274494 + 523 1789516 yhaG b3128 G COG2721 putative hydrolase 3274643..3274978 + 111 1789517 sohA b3129 - - putative protease; htrA suppressor protein 3274978..3275442 + 154 1789518 yhaV b3130 - - orf, hypothetical protein 3275497..3276306 - 269 1789519 agaR b3131 K COG1349 putative DEOR-type transcriptional regulator of aga operon 3276555..3277835 + 426 1789520 agaZ b3132 - - putative tagatose 6-phosphate kinase 2 3277822..3278331 + 169 1789521 agaV b3133 G COG3444 PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) 3278342..3278743 + 133 1789522 agaW b3134 - - PTS system N-acetylgalactosameine-specific IIC component 2 3278763..3279266 + 167 2367198 agaA b3135 G COG1820 putative N-acetylgalactosamine-6-phosphate deacetylase 3279617..3280771 + 384 1789525 agaS b3136 M COG2222 putative tagatose-6-phosphate aldose/ketose isomerase 3280784..3281644 + 286 1789526 agaY b3137 G COG0191 tagatose-bisphosphate aldolase 2 3281811..3282287 + 158 1789527 agaB b3138 G COG3444 PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA) 3282326..3283129 + 267 1789528 agaC b3139 - - PTS system N-acetylgalactosamine-specific IIC component 1 3283119..3283910 + 263 1789529 agaD b3140 - - PTS system, N-acetylglucosamine enzyme IID component 1 3283911..3284666 + 251 1789530 agaI b3141 G COG0363 putative galactosamine-6-phosphate isomerase 3285067..3285651 + 194 1789531 yraH b3142 N COG3539 putative fimbrial-like protein 3285731..3286426 + 231 1789532 yraI b3143 N COG3121 putative chaperone 3286455..3288971 + 838 1789533 yraJ b3144 N COG3188 putative outer membrane protein 3288982..3290073 + 363 1789534 yraK b3145 - - putative fimbrial protein 3290116..3290976 - 286 1789535 yraL b3146 R COG0313 orf, hypothetical protein 3291041..3293077 + 678 1789537 yraM b3147 R COG3107 putative glycosylase 3293035..3293430 + 131 1789538 yraN b3148 L COG0792 orf, hypothetical protein 3293450..3294040 + 196 1789539 yraO b3149 G COG0279 orf, hypothetical protein 3294050..3294625 + 191 1789540 yraP b3150 R COG2823 putative periplasmic protein 3294739..3295779 - 346 1789541 yraQ b3151 R COG0701 orf, hypothetical protein 3295852..3296532 - 226 1789542 yraR b3152 M COG0702 orf, hypothetical protein 3296573..3297133 + 186 1789543 yhbO b3153 R COG0693 orf, hypothetical protein 3297113..3297556 - 147 1789544 yhbP b3154 - - orf, hypothetical protein 3297607..3297909 + 100 1789545 yhbQ b3155 S COG2827 orf, hypothetical protein 3297896..3298399 - 167 1789546 yhbS b3156 R COG3153 orf, hypothetical protein 3298393..3298917 - 174 1789547 yhbT b3157 I COG3154 orf, hypothetical protein 3299126..3300121 + 331 1789548 yhbU b3158 O COG0826 putative collagenase 3300112..3301008 + 298 1789549 yhbV b3159 O COG0826 orf, hypothetical protein 3301089..3302096 + 335 1789551 yhbW b3160 C COG2141 putative enzyme 3302214..3303458 - 414 1789552 mtr b3161 E COG0814 tryptophan-specific transport protein 3303612..3305552 - 646 1789553 deaD b3162 L COG0513 inducible ATP-independent RNA helicase 3305681..3306565 - 294 1789554 yhbM b3163 R COG0457 putative control proteins 3306674..3308878 - 734 1789555 pnp b3164 J COG1185 polynucleotide phosphorylase; cytidylate kinase activity 3309056..3309325 - 89 1789556 rpsO b3165 J COG0184 30S ribosomal subunit protein S15 3309474..3310418 - 314 2367200 truB b3166 J COG0130 tRNA pseudouridine 5S synthase 3310418..3310819 - 133 1789558 rbfA b3167 J COG0858 ribosome-binding factor A 3310983..3313655 - 890 1789559 infB b3168 J COG0532 protein chain initiation factor IF-2 3313680..3315167 - 495 1789560 nusA b3169 K COG0195 transcription pausing; L factor 3315195..3315653 - 152 1789561 yhbC b3170 S COG0779 orf, hypothetical protein 3316278..3317621 + 447 1789563 argG b3172 E COG0137 argininosuccinate synthetase 3317629..3319272 - 547 1789564 yhbX b3173 R COG2194 putative alkaline phosphatase I 3319814..3320146 - 110 1789565 secG b3175 N COG1314 protein export - membrane protein 3320374..3321711 - 445 1789566 mrsA b3176 G COG1109 similar to phosphoglucomutases and phosphomannomutases 3321704..3322597 - 297 1789567 folP b3177 - - 7,8-dihydropteroate synthase 3322642..3324576 - 644 1789568 hflB b3178 O COG0465 degrades sigma32, integral membrane peptidase, cell division protein 3324676..3325305 - 209 1789569 ftsJ b3179 J COG0293 cell division protein 3325431..3325724 + 97 1789570 yhbY b3180 J COG1534 orf, hypothetical protein 3325880..3326341 - 153 1789571 greA b3181 K COG0782 transcription elongation factor: cleaves 3' nucleotide of paused mRNA 3326604..3328037 + 477 1789573 dacB b3182 M COG2027 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4 3328223..3329395 - 390 1789574 yhbZ b3183 R COG0536 putative GTP-binding factor 3329411..3330376 - 321 1789575 yhbE b3184 G COG0697 orf, hypothetical protein 3330503..3330760 - 85 1789576 rpmA b3185 J COG0211 50S ribosomal subunit protein L27 3330781..3331092 - 103 1789577 rplU b3186 J COG0261 50S ribosomal subunit protein L21 3331351..3332322 + 323 1789578 ispB b3187 H COG0142 octaprenyl diphosphate synthase 3332550..3332828 + 92 1789579 nlp b3188 K COG3423 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu 3332876..3334135 - 419 1789580 murA b3189 M COG0766 first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase 3334190..3334459 - 89 1789581 yrbA b3190 T COG0271 orf, hypothetical protein 3334604..3334993 - 129 1789582 yrbB b3191 R COG3113 orf, hypothetical protein 3334897..3335532 - 211 1789583 yrbC b3192 S COG2854 orf, hypothetical protein 3335551..3336102 - 183 1789584 yrbD b3193 R COG1463 orf, hypothetical protein 3336107..3336889 - 260 1789585 yrbE b3194 R COG0767 orf, hypothetical protein 3336897..3337706 - 269 1789586 yrbF b3195 R COG1127 putative ATP-binding component of a transport system 3337916..3338893 + 325 1789587 yrbG b3196 P COG0530 orf, hypothetical protein 3338907..3339893 + 328 1789588 yrbH b3197 M COG0794 putative isomerase 3339914..3340480 + 188 2367202 yrbI b3198 R COG1778 orf, hypothetical protein 3340477..3341052 + 191 1789591 yrbK b3199 S COG3117 orf, hypothetical protein 3341021..3341578 + 185 1789592 yhbN b3200 S COG1934 orf, hypothetical protein 3341585..3342310 + 241 1789593 yhbG b3201 R COG1137 putative ATP-binding component of a transport system 3342358..3343791 + 477 1789594 rpoN b3202 K COG1508 RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation 3343814..3344101 + 95 1789595 yhbH b3203 J COG1544 probable sigma-54 modulation protein 3344219..3344710 + 163 1789597 ptsN b3204 G COG1762 phosphotransferase system enzyme IIA, regulates N metabolism 3344756..3345610 + 284 1789598 yhbJ b3205 R COG1660 orf, hypothetical protein 3345607..3345879 + 90 1789599 ptsO b3206 G COG1925 phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr 3346093..3346725 + 210 1789600 yrbL b3207 - - orf, hypothetical protein 3346722..3347450 - 242 1789601 mtgA b3208 M COG0744 putative peptidoglycan enzyme 3347447..3348109 - 220 1789602 yhbL b3209 S COG3155 sigma cross-reacting protein 27A (SCRP-27A) 3348330..3350660 - 776 1789603 arcB b3210 T COG2198 aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA 3350756..3351685 - 309 2367204 yhcC b3211 R COG1242 orf, hypothetical protein 3352267..3356820 + 1517 1789605 gltB b3212 E COG0067 glutamate synthase, large subunit 3356833..3358251 + 472 1789606 gltD b3213 E COG0493 glutamate synthase, small subunit 3358811..3359575 + 254 1789608 gltF b3214 - - regulator of gltBDF operon, induction of Ntr enzymes 3359747..3360421 + 224 1789609 yhcA b3215 N COG3121 putative chaperone 3360442..3362823 + 793 1789610 yhcD b3216 N COG3188 putative outer membrane protein 3362820..3363299 + 159 1789611 yhcE b3217 - - orf, hypothetical protein 3363337..3364353 - 338 1789612 trs5_10 b3218 L COG3039 IS5 transposase 3364561..3365277 + 238 1789613 yhcF b3219 - - putative transcriptional regulator 3365462..3366589 + 375 1789614 yhcG b3220 - - orf, hypothetical protein 3366649..3367113 - 154 1789615 yhcH b3221 S COG2731 orf, hypothetical protein 3367110..3368018 - 302 1789616 yhcI b3222 K COG1940 putative NAGC-like transcriptional regulator 3367982..3368671 - 229 1789617 yhcJ b3223 G COG3010 putative enzyme 3368719..3370239 - 506 1789618 nanT b3224 G COG0477 sialic acid transporter 3370318..3371211 - 297 1789620 nanA b3225 E COG0329 N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12? 3371333..3372124 - 263 1789621 yhcK b3226 K COG2186 putative FADA-type transcriptional regulator 3372504..3373871 + 455 1789622 yhcL b3227 - - putative transport protein 3373914..3374411 - 165 1789623 sspB b3228 R COG2969 stringent starvation protein B 3374417..3375055 - 212 1789624 sspA b3229 O COG0625 regulator of transcription; stringent starvation protein A 3375450..3375842 - 130 1789625 rpsI b3230 J COG0103 30S ribosomal subunit protein S9 3375858..3376286 - 142 1789626 rplM b3231 J COG0102 50S ribosomal subunit protein L13 3376505..3377632 - 375 1789627 yhcM b3232 R COG1485 orf, hypothetical protein 3377820..3378224 + 134 1789628 yhcB b3233 S COG3105 orf, hypothetical protein 3378378..3379745 + 455 1789629 degQ b3234 O COG0265 serine endoprotease 3379835..3380902 + 355 1789630 degS b3235 O COG0265 protease 3380965..3381903 - 312 1789632 mdh b3236 C COG0039 malate dehydrogenase 3382338..3382808 + 156 1789633 argR b3237 E COG1438 repressor of arg regulon; cer-mediated site specific recombination 3383122..3383436 + 104 1789634 yhcN b3238 - - orf, hypothetical protein 3383492..3383764 - 90 1789635 yhcO b3239 K COG2732 orf, hypothetical protein 3383856..3385823 - 655 1789636 yhcP b3240 S COG1289 orf, hypothetical protein 3385829..3386761 - 310 1789637 yhcQ b3241 Q COG1566 putative membrane protein 3386769..3387041 - 90 1789638 yhcR b3242 - - orf, hypothetical protein 3387155..3388084 + 309 1789639 yhcS b3243 K COG0583 putative transcriptional regulator LYSR-type 3388218..3389663 - 481 1789640 tldD b3244 R COG0312 suppresses inhibitory activity of CsrA 3390094..3393054 - 986 2367206 yhdP b3245 - - orf, hypothetical protein 3393047..3393895 - 282 1789643 yhdR b3246 - - orf, hypothetical protein 3393963..3395450 - 495 1789645 cafA b3247 J COG1530 bundles of cytoplasmic filaments 3395422..3396015 - 197 1789646 yhdE b3248 D COG0424 orf, hypothetical protein 3396024..3396512 - 162 1789647 mreD b3249 M COG2891 rod shape-determining protein 3396512..3397615 - 367 1789648 mreC b3250 M COG1792 rod shape-determining protein 3397681..3398784 - 367 1789649 mreB b3251 D COG1077 regulator of ftsI, penicillin binding protein 3, septation function 3399029..3400969 - 646 1789650 yhdA b3252 T COG2199 orf, hypothetical protein 3401121..3402095 + 324 1789651 yhdH b3253 C COG0604 putative dehydrogenase 3402153..3402254 - 33 1789652 b3254 b3254 - - orf, hypothetical protein 3403073..3403543 + 156 1789653 accB b3255 I COG0511 acetylCoA carboxylase, BCCP subunit; carrier of biotin 3403554..3404903 + 449 1789654 accC b3256 I COG0439 acetyl CoA carboxylase, biotin carboxylase subunit 3405012..3405254 + 80 1789655 yhdT b3257 - - orf, hypothetical protein 3405238..3406695 + 485 1789656 panF b3258 E COG0591 sodium/pantothenate symporter 3406707..3407588 + 293 2367208 prmA b3259 J COG2264 methylase for 50S ribosomal subunit protein L11 3407917..3408882 + 321 1789660 yhdG b3260 R COG0042 putative dehydrogenase 3408908..3409204 + 98 1789661 fis b3261 K COG2901 site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription 3409284..3410174 + 296 1789662 yhdJ b3262 L COG0863 putative methyltransferase 3410258..3410437 + 59 1789663 yhdU b3263 - - orf, hypothetical protein 3410440..3411102 - 220 1789664 envR b3264 K COG1309 putative transcriptional regulator 3411501..3412658 + 385 1789665 acrE b3265 Q COG0845 transmembrane protein affects septum formation and cell membrane permeability 3412670..3415774 + 1034 1789666 acrF b3266 Q COG0841 integral transmembrane protein; acridine resistance 3416027..3416248 + 73 1789667 yhdV b3267 - - orf, hypothetical protein 3416786..3417703 + 305 1789668 yhdW b3268 E COG0834 putative periplasmic binding transport protein 3417753..3418859 + 368 1789669 yhdX b3269 E COG0765 putative transport system permease protein 3418958..3420064 + 368 1789671 yhdY b3270 E COG0765 putative transport system permease protein 3420072..3420830 + 252 1789672 yhdZ b3271 E COG1126 putative ATP-binding component of a transport system 3426657..3427427 + 256 1789673 yrdA b3279 R COG0663 putative transferase 3427403..3427660 - 85 1789674 yrdB b3280 - - orf, hypothetical protein 3427657..3428475 - 272 1789675 aroE b3281 E COG0169 dehydroshikimate reductase 3428480..3429052 - 190 2367210 yrdC b3282 J COG0009 orf, hypothetical protein 3429057..3429566 - 169 1789677 yrdD b3283 L COG0551 putative DNA topoisomerase 3429629..3430102 - 157 1789679 smg b3284 S COG2922 orf, hypothetical protein 3430074..3430382 - 102 1789680 smf_2 b3285 - - orf, fragment 2 3430436..3431197 - 253 1789681 smf_1 b3286 L COG0758 orf, fragment 1 3431327..3431836 + 169 1789682 def b3287 J COG0242 peptide deformylase 3431851..3432798 + 315 1789683 fmt b3288 J COG0223 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 3432844..3434133 + 429 2367212 sun b3289 J COG0144 orf, hypothetical protein 3434155..3435531 + 458 1789685 trkA b3290 P COG0569 transport of potassium 3435661..3436071 + 136 1789686 mscL b3291 M COG1970 mechanosensitive channel 3436342..3436767 - 141 1789687 yhdM b3292 K COG0789 putative transcriptional regulator 3436778..3437146 - 122 1789688 yhdN b3293 - - orf, hypothetical protein 3437253..3437636 - 127 1789689 rplQ b3294 J COG0203 50S ribosomal subunit protein L17 3437677..3438666 - 329 1789690 rpoA b3295 K COG0202 RNA polymerase, alpha subunit 3438692..3439312 - 206 1789691 rpsD b3296 J COG0522 30S ribosomal subunit protein S4 3439346..3439735 - 129 1789692 rpsK b3297 J COG0100 30S ribosomal subunit protein S11 3439752..3440108 - 118 1789693 rpsM b3298 J COG0099 30S ribosomal subunit protein S13 3440255..3440371 - 38 1789695 rpmJ b3299 J COG0257 50S ribosomal subunit protein L36 3440403..3441734 - 443 1789696 prlA b3300 N COG0201 putative ATPase subunit of translocase 3441742..3442176 - 144 1789697 rplO b3301 J COG0200 50S ribosomal subunit protein L15 3442180..3442359 - 59 1789698 rpmD b3302 J COG1841 50S ribosomal subunit protein L30 3442363..3442866 - 167 1789699 rpsE b3303 J COG0098 30S ribosomal subunit protein S5 3442881..3443234 - 117 1789700 rplR b3304 J COG0256 50S ribosomal subunit protein L18 3443244..3443777 - 177 1789701 rplF b3305 J COG0097 50S ribosomal subunit protein L6 3443790..3444182 - 130 1789702 rpsH b3306 J COG0096 30S ribosomal subunit protein S8, and regulator 3444216..3444521 - 101 1789703 rpsN b3307 J COG0199 30S ribosomal subunit protein S14 3444536..3445075 - 179 1789704 rplE b3308 J COG0094 50S ribosomal subunit protein L5 3445090..3445404 - 104 1789705 rplX b3309 J COG0198 50S ribosomal subunit protein L24 3445415..3445786 - 123 1789706 rplN b3310 J COG0093 50S ribosomal subunit protein L14 3445951..3446205 - 84 1789707 rpsQ b3311 J COG0186 30S ribosomal subunit protein S17 3446205..3446396 - 63 1789708 rpmC b3312 J COG0255 50S ribosomal subunit protein L29 3446396..3446806 - 136 1789709 rplP b3313 J COG0197 50S ribosomal subunit protein L16 3446819..3447520 - 233 1789710 rpsC b3314 J COG0092 30S ribosomal subunit protein S3 3447538..3447870 - 110 1789711 rplV b3315 J COG0091 50S ribosomal subunit protein L22 3447885..3448163 - 92 1789712 rpsS b3316 J COG0185 30S ribosomal subunit protein S19 3448180..3449001 - 273 1789713 rplB b3317 J COG0090 50S ribosomal subunit protein L2 3449019..3449321 - 100 1789714 rplW b3318 J COG0089 50S ribosomal subunit protein L23 3449318..3449923 - 201 1789715 rplD b3319 J COG0088 50S ribosomal subunit protein L4, regulates expression of S10 operon 3449934..3450563 - 209 1789716 rplC b3320 J COG0087 50S ribosomal subunit protein L3 3450596..3450907 - 103 1789717 rpsJ b3321 J COG0051 30S ribosomal subunit protein S10 3451145..3451564 - 139 1789719 pinO b3322 - - calcium-binding protein required for initiation of chromosome replication 3451566..3453035 - 489 1789720 yheD b3323 - - putative export protein A for general secretion pathway (GSP) 3453215..3454030 + 271 1789721 yheE b3324 N COG3031 putative general secretion pathway for protein export (GSP) 3454002..3455966 + 654 1789722 yheF b3325 N COG1450 putative general protein secretion protein 3455976..3457457 + 493 1789723 yheG b3326 N COG2804 putative general secretion pathway for protein export (GSP) (TYPE II TRAFFIC WARDEN ATPASE) 3457454..3458650 + 398 1789724 hofF b3327 N COG1459 putative general protein secretion protein 3458660..3459097 + 145 1789725 hofG b3328 N COG2165 putative general protein secretion protein 3459105..3459614 + 169 1789726 hofH b3329 N COG2165 putative general protein secretion protein 3459572..3459988 + 138 1789727 yheH b3330 N COG2165 putative export protein for general secretion pathway (GSP) 3459981..3460568 + 195 1789728 yheI b3331 N COG2165 putative export protein I for general secretion pathway (GSP) 3460561..3461544 + 327 1789729 yheJ b3332 N COG3156 putative export protein J for general secretion pathway (GSP) 3461556..3462722 + 388 1789730 yheK b3333 N COG3297 putative general protein secretion protein 3462695..3463180 + 161 1789731 pshM b3334 - - putative general secretion 3463180..3463857 + 225 1789732 hofD b3335 N COG1989 leader peptidase, integral membrane protein 3463886..3464362 - 158 1789733 bfr b3336 P COG2193 bacterioferrin, an iron storage homoprotein 3464434..3464628 - 64 1789735 yheA b3337 P COG2906 orf, hypothetical protein 3464797..3467490 - 897 1789736 yheB b3338 - - putative enzyme 3467782..3468966 - 394 1789737 tufA b3339 J COG0050 protein chain elongation factor EF-Tu (duplicate of tufB) 3469037..3471151 - 704 1789738 fusA b3340 J COG0480 GTP-binding protein chain elongation factor EF-G 3471179..3471718 - 179 1789739 rpsG b3341 J COG0049 30S ribosomal subunit protein S7, initiates assembly 3471815..3472189 - 124 1789740 rpsL b3342 J COG0048 30S ribosomal subunit protein S12 3472315..3472602 - 95 1789741 yheL b3343 P COG2168 orf, hypothetical protein 3472610..3472969 - 119 1789742 yheM b3344 P COG2923 orf, hypothetical protein 3472969..3473355 - 128 1789743 yheN b3345 P COG1553 orf, hypothetical protein 3473355..3474089 - 244 1789744 yheO b3346 S COG2964 orf, hypothetical protein 3474244..3475056 - 270 1789745 fkpA b3347 O COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 3475277..3475495 + 72 1789747 slyX b3348 S COG2900 host factor for lysis of phiX174 infection 3475544..3476134 - 196 1789748 slyD b3349 O COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 3476439..3478244 - 601 1789749 kefB b3350 P COG1226 K+ efflux; NEM-activable K+/H+ antiporter 3478244..3478798 - 184 1789750 yheR b3351 R COG2249 putative NAD(P)H oxidoreductase 3478926..3480839 + 637 1789751 yheS b3352 R COG0488 putative ATP-binding component of a transport system 3480839..3481861 + 340 1789752 yheT b3353 R COG0429 orf, hypothetical protein 3481855..3482073 + 72 1789753 yheU b3354 S COG3089 orf, hypothetical protein 3482127..3482996 + 289 2367214 prkB b3355 - - probable phosphoribulokinase 3483051..3483455 - 134 1789755 yhfA b3356 S COG1765 orf, hypothetical protein 3483757..3484389 + 210 1789756 crp b3357 T COG0664 cyclic AMP receptor protein 3484440..3486530 + 696 1789757 yhfK b3358 S COG1289 orf, hypothetical protein 3486597..3487817 - 406 1789759 argD b3359 E COG0160 acetylornithine delta-aminotransferase 3487903..3488466 - 187 1789760 pabA b3360 E COG0512 p-aminobenzoate synthetase, component II 3488498..3489100 - 200 1789761 fic b3361 D COG2184 induced in stationary phase, recognized by rpoS, affects cell division 3489090..3489257 - 55 1789762 yhfG b3362 - - orf, hypothetical protein 3489362..3489934 - 190 1789763 ppiA b3363 O COG0652 peptidyl-prolyl cis-trans isomerase A (rotamase A) 3490205..3491386 + 393 1789764 yhfC b3364 G COG0477 putative transport 3491648..3494191 + 847 1789765 nirB b3365 C COG1251 nitrite reductase (NAD(P)H) subunit 3494188..3494514 + 108 1789766 nirD b3366 P COG2146 nitrite reductase (NAD(P)H) subunit 3494892..3495446 + 184 1789767 nirC b3367 - - nitrite reductase activity 3495465..3496838 + 457 1789768 cysG b3368 H COG0007 uroporphyrinogen III methylase; sirohaeme biosynthesis 3497085..3497252 + 55 1789770 yhfL b3369 - - orf, hypothetical protein 3497496..3498884 + 462 2367216 yhfM b3370 E COG0531 putative amino acid/amine transport protein 3498884..3499927 + 347 1789772 yhfN b3371 M COG2222 putative transport protein 3499890..3500339 + 149 1789773 yhfO b3372 G COG1082 orf, hypothetical protein 3500404..3500808 + 134 2367217 yhfP b3373 G COG1082 orf, hypothetical protein 3500805..3501590 + 261 1789775 yhfQ b3374 G COG0524 putative kinase 3501624..3502421 + 265 1789776 yhfR b3375 K COG2188 putative transcriptional regulator 3502573..3503658 - 361 1789777 yhfS b3376 - - orf, hypothetical protein 3503670..3504974 - 434 2367218 yhfT b3377 - - putative transport system permease protein 3504986..3505378 - 130 1789779 yhfU b3378 - - orf, hypothetical protein 3505350..3506228 - 292 1789780 yhfV b3379 R COG1735 putative hydrolase 3506225..3507451 - 408 1789781 yhfW b3380 G COG1015 putative mutase 3507451..3508614 - 387 1789782 yhfX b3381 E COG3457 orf, hypothetical protein 3508698..3509102 - 134 1789784 yhfY b3382 - - orf, hypothetical protein 3509077..3509763 - 228 1789785 yhfZ b3383 - - orf, hypothetical protein 3510272..3511276 - 334 1789786 trpS b3384 J COG0180 tryptophan tRNA synthetase 3511269..3512027 - 252 1789787 gph b3385 R COG0546 phosphoglycolate phosphatase 3512020..3512697 - 225 1789788 rpe b3386 G COG0036 D-ribulose-5-phosphate 3-epimerase 3512715..3513551 - 278 1789789 dam b3387 L COG0338 DNA adenine methylase 3513658..3514944 - 428 1789790 damX b3388 S COG3266 putative membrane protein; interferes with cell division 3515036..3516124 - 362 1789791 aroB b3389 E COG0337 3-dehydroquinate synthase 3516181..3516903 - 240 1789792 aroK b3390 - - shikimate kinase I 3517103..3518341 - 412 1789793 hofQ b3391 N COG1450 putative transport portein 3518253..3518696 - 147 1789794 yrfA b3392 - - orf, hypothetical protein 3518647..3519087 - 146 1789795 yrfB b3393 N COG2165 orf, hypothetical protein 3519071..3519610 - 179 1789796 yrfC b3394 - - orf, hypothetical protein 3519610..3520416 - 268 1789797 yrfD b3395 - - orf, hypothetical protein 3520485..3523061 + 858 1789799 mrcA b3396 M COG0744 peptidoglycan synthetase; penicillin-binding protein 1A 3523227..3523787 - 186 1789800 yrfE b3397 L COG0494 orf, hypothetical protein 3524107..3526242 + 711 1789801 yrfF b3398 - - putative dehydrogenase 3526262..3526975 + 237 1789802 yrfG b3399 R COG1011 putative phosphatase 3526986..3527387 + 133 1789803 yrfH b3400 J COG1188 orf, hypothetical protein 3527406..3528290 + 294 1789804 yrfI b3401 O COG1281 orf, hypothetical protein 3528353..3530077 - 574 1789805 yhgE b3402 - - putative transport 3530456..3532078 + 540 1789807 pckA b3403 C COG1866 phosphoenolpyruvate carboxykinase 3532154..3533506 - 450 1789808 envZ b3404 T COG0642 protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC 3533503..3534222 - 239 1789809 ompR b3405 T COG0745 response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis 3534414..3534926 + 170 1789810 greB b3406 - - transcription elongation factor and transcript cleavage 3535122..3537344 + 740 1789811 yhgF b3407 R COG2183 orf, hypothetical protein 3537799..3538026 + 75 1789812 feoA b3408 P COG1918 ferrous iron transport protein A 3538043..3540364 + 773 1789813 feoB b3409 P COG0370 ferrous iron transport protein B 3540364..3540600 + 78 1789814 yhgG b3410 - - orf, hypothetical protein 3540803..3541681 + 292 1789816 yhgA b3411 - - orf, hypothetical protein 3541710..3542480 - 256 1789817 bioH b3412 R COG0596 biotin biosynthesis; reaction prior to pimeloyl CoA 3542470..3543201 + 243 1789818 yhgH b3413 R COG1040 orf, hypothetical protein 3543260..3543835 + 191 1789819 yhgI b3414 O COG0694 orf, hypothetical protein 3544195..3545508 + 437 1789820 gntT b3415 G COG2610 high-affinity transport of gluconate / gluconate permease 3545619..3547703 - 694 1789821 malQ b3416 G COG1640 4-alpha-glucanotransferase (amylomaltase) 3547713..3550106 - 797 2367221 malP b3417 G COG0058 maltodextrin phosphorylase 3550718..3553423 + 901 2367223 malT b3418 K COG2909 positive regulator of mal regulon 3553466..3554071 - 201 1789825 yhgJ b3419 - - orf, hypothetical protein 3554044..3554484 - 146 1789826 rtcA b3420 - - RNA 3'-terminal phosphate cyclase 3554485..3555711 - 408 2367224 rtcB b3421 S COG1690 orf, hypothetical protein 3555900..3557498 + 532 1789828 rtcR b3422 O COG1221 putative 2-component regulator 3557480..3558238 - 252 1789829 glpR b3423 K COG1349 repressor of the glp operon 3558255..3559085 - 276 2367225 glpG b3424 R COG0705 protein of glp regulon 3559130..3559456 - 108 1789831 glpE b3425 P COG0607 protein of glp regulon 3559646..3561151 + 501 2367226 glpD b3426 C COG0578 sn-glycerol-3-phosphate dehydrogenase (aerobic) 3561357..3561650 - 97 1789834 yzgL b3427 - - orf, hypothetical protein 3561767..3564214 - 815 2367228 glgP b3428 G COG0058 glycogen phosphorylase 3564233..3565666 - 477 1789836 glgA b3429 G COG0297 glycogen synthase 3565666..3566961 - 431 1789837 glgC b3430 G COG0448 glucose-1-phosphate adenylyltransferase 3566979..3568952 - 657 2367229 glgX b3431 G COG1523 part of glycogen operon, a glycosyl hydrolase, debranching enzyme 3568949..3571135 - 728 1789839 glgB b3432 G COG0296 1,4-alpha-glucan branching enzyme 3571408..3572511 - 367 1789841 asd b3433 E COG0136 aspartate-semialdehyde dehydrogenase 3572704..3573297 + 197 1789842 yhgN b3434 S COG2095 orf, hypothetical protein 3573354..3573689 - 111 1789843 gntU_2 b3435 - - low-affinity gluconate transport permease protein, fragment 2 3573695..3574693 - 332 1789844 gntU_1 b3436 - - low-affinity gluconate transport permease protein, interrupted 3574697..3575185 - 162 1789845 gntK b3437 P COG3265 gluconokinase 2, thermoresistant 3575416..3576357 - 313 1789846 gntR b3438 K COG1609 regulator of gluconate (gnt) operon 3576581..3577276 - 231 1789847 yhhW b3439 R COG1741 orf, hypothetical protein 3577399..3578436 - 345 1789848 yhhX b3440 R COG0673 putative regulator 3578769..3579257 + 162 1789849 yhhY b3441 K COG0454 orf, hypothetical protein 3579494..3580672 + 392 1789850 yhhZ b3442 R COG3157 orf, hypothetical protein 3580669..3581085 + 138 1789851 yrhA b3443 - - orf, hypothetical protein 3581114..3581389 + 91 1789852 insA_6 b3444 - - IS1 protein InsA 3581308..3581811 + 167 1789853 insB_6 b3445 L COG1662 IS1 protein InsB 3582390..3582674 + 94 1789855 yrhB b3446 - - orf, hypothetical protein 3582712..3584454 - 580 1789856 ggt b3447 E COG0405 gamma-glutamyltranspeptidase 3584574..3585014 + 146 1789857 yhhA b3448 - - orf, hypothetical protein 3585001..3585744 - 247 1789858 ugpQ b3449 C COG0584 glycerophosphodiester phosphodiesterase, cytosolic 3585741..3586850 - 369 1789859 ugpC b3450 G COG1130 ATP-binding component of sn-glycerol 3-phosphate transport system 3586813..3587658 - 281 1789860 ugpE b3451 G COG0395 sn-glycerol 3-phosphate transport system, integral membrane protein 3587655..3588542 - 295 1789861 ugpA b3452 G COG1175 sn-glycerol 3-phosphate transport system, integral membrane protein 3588640..3589956 - 438 1789862 ugpB b3453 G COG1653 sn-glycerol 3-phosphate transport system; periplasmic binding protein 3590355..3591080 - 241 1789863 livF b3454 E COG0410 ATP-binding component of leucine transport 3591070..3591837 - 255 1789864 livG b3455 E COG0411 ATP-binding component of high-affinity branched-chain amino acid transport system 3591834..3593111 - 425 1789865 livM b3456 E COG0559 high-affinity branched-chain amino acid transport 3593108..3594034 - 308 1789866 livH b3457 E COG0559 high-affinity branched-chain amino acid transport system; membrane component 3594082..3595191 - 369 1789867 livK b3458 E COG0683 high-affinity leucine-specific transport system; periplasmic binding protein 3595615..3595998 + 127 1789869 yhhK b3459 - - orf, hypothetical protein 3596186..3597346 - 386 1789870 livJ b3460 E COG0683 high-affinity amino acid transport system; periplasmic binding protein 3597560..3598414 - 284 1789871 rpoH b3461 K COG0568 RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures 3598659..3599717 - 352 1789872 ftsX b3462 D COG2177 cell division membrane protein 3599710..3600378 - 222 1789873 ftsE b3463 D COG2884 ATP-binding component of a membrane-associated complex involved in cell division 3600381..3601874 - 497 1789874 ftsY b3464 N COG0552 cell division membrane protein 3602024..3602620 + 198 1789875 yhhF b3465 L COG0742 orf, hypothetical protein 3602610..3602879 + 89 1789876 yhhL b3466 - - orf, hypothetical protein 3602882..3603241 - 119 1789877 yhhM b3467 - - putative receptor 3603382..3604008 + 208 1789878 yhhN b3468 - - putative enzyme 3604082..3606280 + 732 1789879 zntA b3469 P COG2217 zinc-transporting ATPase 3606382..3606627 - 81 1789881 yhhP b3470 K COG0425 orf, hypothetical protein 3606848..3607513 + 221 1789882 yhhQ b3471 S COG1738 orf, hypothetical protein 3607532..3608143 + 203 1789883 b3472 b3472 - - orf, hypothetical protein 3608147..3609406 - 419 1789884 yhhS b3473 G COG0477 putative transport 3609415..3610545 + 376 1789885 yhhT b3474 R COG0628 orf, hypothetical protein 3610600..3611187 + 195 1789886 yhhU b3475 Q COG2091 orf, hypothetical protein 3611298..3612872 + 524 1789887 nikA b3476 E COG0747 periplasmic binding protein for nickel 3612872..3613816 + 314 1789888 nikB b3477 E COG0601 transport of nickel, membrane protein 3613813..3614646 + 277 1789889 nikC b3478 E COG1173 transport of nickel, membrane protein 3614646..3615410 + 254 1789890 nikD b3479 E COG0444 ATP-binding protein of nickel transport system 3615407..3616213 + 268 1789891 nikE b3480 E COG1124 ATP-binding protein of nickel transport system 3616219..3616620 + 133 1789892 yhhG b3481 K COG0864 orf, hypothetical protein 3616823..3621058 + 1411 1789894 rhsB b3482 M COG3209 rhsB protein in rhs element 3621045..3621413 + 122 1789895 yhhH b3483 - - orf, hypothetical protein 3622009..3623145 + 378 1789896 yhhI b3484 - - putative receptor 3623310..3624437 - 375 1789897 yhhJ b3485 R COG0842 putative transporter 3624434..3627118 - 894 2367231 yhiH b3486 - - putative ATP-binding component of a transport system, fragment 1 3627165..3628232 - 355 1789900 yhiI b3487 Q COG0845 putative membrane protein 3628598..3630220 - 540 1789902 yhiJ b3488 - - orf, hypothetical protein 3630482..3630853 - 123 1789903 yhiK b3489 - - orf, hypothetical protein 3630850..3632088 - 412 2367233 yhiL b3490 - - orf, hypothetical protein 3632372..3633523 + 383 1789905 yhiM b3491 - - orf, hypothetical protein 3633838..3635040 - 400 2367234 yhiN b3492 R COG2081 orf, hypothetical protein 3635272..3636771 + 499 1789907 pitA b3493 P COG0306 low-affinity phosphate transport 3637015..3637350 - 111 1789908 yhiO b3494 - - orf, hypothetical protein 3637741..3638175 + 144 1789909 uspA b3495 T COG0589 universal stress protein; broad regulatory function? 3638492..3639961 + 489 1789911 yhiP b3496 E COG3104 putative transport protein 3640010..3640762 - 250 1789912 yhiQ b3497 Q COG0500 orf, hypothetical protein 3640770..3642812 - 680 1789913 prlC b3498 E COG0339 oligopeptidase A 3643015..3643857 + 280 1789914 yhiR b3499 S COG2961 orf, hypothetical protein 3643929..3645281 + 450 1789915 gor b3500 C COG1249 glutathione oxidoreductase 3646158..3646511 + 117 1789916 arsR b3501 K COG0640 transcriptional repressor of chromosomal ars operon 3646544..3647854 + 436 1789917 arsB b3502 P COG1055 arsenical pump membrane protein 3647867..3648292 + 141 1789918 arsC b3503 P COG1393 arsenate reductase 3648921..3649703 + 260 1789920 yhiS b3504 - - orf, hypothetical protein 3649812..3650828 - 338 1789921 trs5_11 b3505 L COG3039 IS5 transposase 3651558..3652157 + 199 1789922 slp b3506 M COG3065 outer membrane protein induced after carbon starvation 3652313..3652843 + 176 1789923 yhiF b3507 - - orf, hypothetical protein 3652885..3653532 - 215 1789924 yhiD b3508 S COG1285 putative transport ATPase 3653596..3653934 - 112 1789925 hdeB b3509 - - orf, hypothetical protein 3654038..3654370 - 110 1789926 hdeA b3510 - - orf, hypothetical protein 3654625..3655197 + 190 1789927 hdeD b3511 S COG3247 orf, hypothetical protein 3655996..3656523 + 175 1789928 yhiE b3512 - - orf, hypothetical protein 3656862..3658019 + 385 1789929 yhiU b3513 Q COG0845 putative membrane protein 3658044..3661157 + 1037 1789930 yhiV b3514 Q COG0841 putative transport system permease protein 3661520..3662248 - 242 1789932 yhiW b3515 K COG2207 putative ARAC-type regulatory protein 3662616..3663440 - 274 1789933 yhiX b3516 K COG2207 putative ARAC-type regulatory protein 3663810..3665210 - 466 1789934 gadA b3517 E COG0076 glutamate decarboxylase isozyme 3665421..3666818 - 465 1789935 yhjA b3518 P COG1858 putative cytochrome C peroxidase (EC 1.11.1) 3667222..3668871 + 549 1789936 treF b3519 G COG1626 cytoplasmic trehalase 3668922..3669524 - 200 1789937 yhjB b3520 T COG2197 putative regulator 3669972..3670943 + 323 1789938 yhjC b3521 K COG0583 putative transcriptional regulator LYSR-type 3670992..3672005 + 337 1789939 yhjD b3522 J COG1295 orf, hypothetical protein 3672416..3673738 + 440 1789941 yhjE b3523 G COG0477 putative transport protein 3673920..3675995 - 691 2367236 yhjG b3524 M COG2982 orf, hypothetical protein 3676050..3676820 - 256 2367237 yhjH b3525 T COG2200 orf, hypothetical protein 3676830..3677978 + 382 1789945 kdgK b3526 G COG0524 ketodeoxygluconokinase 3678074..3679570 - 498 1789946 yhjJ b3527 R COG0612 orf, hypothetical protein 3679791..3681077 - 428 1789947 dctA b3528 C COG1301 uptake of C4-dicarboxylic acids 3681260..3683215 - 651 1789948 yhjK b3529 T COG2200 orf, hypothetical protein 3683330..3686830 - 1166 2367239 yhjL b3530 R COG0457 putative oxidoreductase subunit 3686784..3687890 - 368 1789951 yhjM b3531 G COG3405 putative endoglucanase 3687897..3690236 - 779 1789952 yhjN b3532 - - orf, hypothetical protein 3690247..3692913 - 888 2367240 yhjO b3533 M COG1215 putative cellulose synthase 3692862..3693590 - 242 1789955 yhjQ b3534 D COG1192 orf, hypothetical protein 3693626..3693814 - 62 1789956 yhjR b3535 - - orf, hypothetical protein 3694087..3695658 + 523 1789958 yhjS b3536 - - putative protease 3695658..3695846 + 62 1789959 yhjT b3537 - - orf, hypothetical protein 3695843..3697522 + 559 1789960 yhjU b3538 - - orf, hypothetical protein 3698192..3699463 + 423 1789961 yhjV b3539 E COG0814 putative transporter protein 3699493..3700497 - 334 1789962 dppF b3540 E COG1124 putative ATP-binding component of dipeptide transport system 3700494..3701477 - 327 1789963 dppD b3541 E COG0444 putative ATP-binding component of dipeptide transport system 3701488..3702390 - 300 1789964 dppC b3542 E COG1173 dipeptide transport system permease protein 2 3702400..3703419 - 339 1789965 dppB b3543 E COG0601 dipeptide transport system permease protein 1 3703727..3705334 - 535 1789966 dppA b3544 E COG0747 dipeptide transport protein 3706413..3708137 - 574 2367242 yhjW b3546 R COG2194 orf, hypothetical protein 3708428..3709636 - 402 1789969 yhjX b3547 G COG0477 putative resistance protein 3709865..3710569 - 234 1789970 yhjY b3548 - - putative lipase 3710721..3711284 + 187 1789971 tag b3549 L COG2818 3-methyl-adenine DNA glycosylase I, constitutive 3711281..3711721 + 146 1789972 yiaC b3550 K COG0454 orf, hypothetical protein 3711690..3713909 - 739 1789973 bisC b3551 C COG0243 biotin sulfoxide reductase 3714176..3714835 + 219 1789974 yiaD b3552 M COG2885 putative outer membrane protein 3714927..3715913 + 328 2367243 yiaE b3553 C COG1052 putative dehydrogenase 3715963..3716793 - 276 1789976 yiaF b3554 - - orf, hypothetical protein 3717107..3717397 + 96 1789978 yiaG b3555 K COG2944 orf, hypothetical protein 3717678..3717890 + 70 1789979 cspA b3556 K COG1278 cold shock protein 7.4, transcriptional activator of hns 3718309..3718830 + 173 1789980 yi5A b3557 L COG2963 IS150 hypothetical protein 3718827..3719678 + 283 1789981 t150 b3558 L COG2801 IS150 putative transposase 3719957..3722026 - 689 1789982 glyS b3559 J COG0751 glycine tRNA synthetase, beta subunit 3722036..3722947 - 303 1789983 glyQ b3560 J COG0752 glycine tRNA synthetase, alpha subunit 3723516..3724511 + 331 1789984 yiaH b3561 S COG3274 orf, hypothetical protein 3724553..3724993 - 146 1789985 yiaA b3562 - - orf, hypothetical protein 3725036..3725389 - 117 1789986 yiaB b3563 - - orf, hypothetical protein 3725546..3727000 - 484 1789987 xylB b3564 G COG1070 xylulokinase 3727072..3728394 - 440 1789988 xylA b3565 G COG2115 D-xylose isomerase 3728760..3729752 + 330 1789990 xylF b3566 G COG1879 xylose binding protein transport system 3729830..3731371 + 513 1789991 xylG b3567 G COG1129 putative ATP-binding protein of xylose transport system 3731349..3732530 + 393 1789992 xylH b3568 G COG1172 putative xylose transport, membrane component 3732608..3733786 + 392 1789993 xylR b3569 K COG1609 putative regulator of xyl operon 3733982..3734806 - 274 1789994 bax b3570 R COG2992 putative ATP-binding protein 3735126..3737156 + 676 1789995 malS b3571 G COG0366 alpha-amylase 3737334..3738587 + 417 1789996 avtA b3572 E COG0436 alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C 3738738..3739211 - 157 2367245 yiaI b3573 C COG1142 orf, hypothetical protein 3739313..3740161 - 282 1789999 yiaJ b3574 K COG1414 putative regulator 3740362..3741360 + 332 1790000 yiaK b3575 C COG2055 putative dehydrogenase 3741372..3741839 + 155 1790001 yiaL b3576 S COG2731 putative lipase 3741957..3742430 + 157 1790002 yiaM b3577 S COG3090 orf, hypothetical protein 3742433..3743707 + 424 1790003 yiaN b3578 S COG1593 putative membrane protein 3743724..3744710 + 328 1790004 yiaO b3579 G COG1638 putative solute-binding transport protein 3744714..3746210 + 498 1790005 lyxK b3580 G COG1070 L-xylulose kinase, cryptic 3746207..3746869 + 220 1790006 sgbH b3581 G COG0269 probable 3-hexulose 6-phosphate synthase 3746829..3747722 + 297 1790007 sgbU b3582 G COG3623 probable 3-hexulose-6-phosphate isomerase 3747716..3748411 + 231 1790008 sgbE b3583 G COG0235 putative epimerase/aldolase 3748758..3749498 - 246 1790010 yiaT b3584 - - putative outer membrane protein 3749622..3750596 + 324 1790011 yiaU b3585 K COG0583 putative transcriptional regulator LYSR-type 3750593..3751729 - 378 1790012 yiaV b3586 Q COG1566 putative membrane protein 3751735..3752058 - 107 1790013 yiaW b3587 - - orf, hypothetical protein 3752603..3754231 - 542 1790014 aldB b3588 C COG1012 aldehyde dehydrogenase B (lactaldehyde dehydrogenase) 3754306..3755454 - 382 1790015 yiaY b3589 C COG1454 putative oxidoreductase 3755644..3757488 - 614 2367247 selB b3590 J COG3276 selenocysteinyl-tRNA-specific translation factor 3757485..3758876 - 463 2367248 selA b3591 E COG1921 selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase 3758974..3759582 - 202 1790018 yibF b3592 O COG0625 putative S-transferase 3759810..3763943 + 1377 1790020 rhsA b3593 M COG3209 rhsA protein in rhs element 3763964..3764806 + 280 1790021 yibA b3594 C COG1413 orf, hypothetical protein 3764848..3765549 + 233 2367250 yibJ b3595 M COG3209 orf, hypothetical protein 3765804..3766265 + 153 1790023 yibG b3596 - - orf, hypothetical protein 3767870..3769006 - 378 1790024 yibH b3597 Q COG1566 putative membrane protein 3769009..3769371 - 120 1790025 yibI b3598 - - orf, hypothetical protein 3769908..3771821 + 637 1790027 mtlA b3599 C COG2213 PTS system, mannitol-specific enzyme IIABC components 3772051..3773199 + 382 1790028 mtlD b3600 G COG0246 mannitol-1-phosphate dehydrogenase 3773199..3773786 + 195 1790029 mtlR b3601 - - repressor for mtl 3774292..3774654 + 120 1790030 yibL b3602 - - orf, hypothetical protein 3775026..3776681 + 551 1790031 lldP b3603 C COG1620 L-lactate permease 3776681..3777457 + 258 1790032 lldR b3604 K COG2186 transcriptional regulator 3777454..3778644 + 396 1790033 lldD b3605 C COG1304 L-lactate dehydrogenase 3778842..3779315 + 157 1790034 yibK b3606 J COG0219 orf, hypothetical protein 3779368..3780189 - 273 1790035 cysE b3607 E COG1045 serine acetyltransferase 3780269..3781288 - 339 1790037 gpsA b3608 C COG0240 glycerol-3-phosphate dehydrogenase (NAD+) 3781288..3781755 - 155 1790038 secB b3609 N COG1952 protein export; molecular chaperone; may bind to signel sequence 3781818..3782069 - 83 1790039 grxC b3610 O COG0695 glutaredoxin 3 3782211..3782642 - 143 1790040 yibN b3611 P COG0607 orf, hypothetical protein 3782887..3784431 + 514 1790041 yibO b3612 G COG0696 putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 3784441..3785724 + 427 1790042 yibP b3613 M COG0739 putative membrane protein 3785854..3786687 + 277 1790043 yibQ b3614 S COG2861 orf, hypothetical protein 3786674..3787708 - 344 1790044 yibD b3615 M COG0463 putative regulator 3787947..3788972 - 341 1790045 tdh b3616 E COG1063 threonine dehydrogenase 3788982..3790178 - 398 1790046 kbl b3617 H COG0156 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) 3790453..3791325 - 290 1790048 htrL b3618 - - involved in lipopolysaccharide biosynthesis 3791614..3792546 + 310 1790049 rfaD b3619 M COG0451 ADP-L-glycero-D-mannoheptose-6-epimerase 3792556..3793602 + 348 1790050 rfaF b3620 M COG0859 ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis 3793606..3794565 + 319 1790051 rfaC b3621 M COG0859 heptosyl transferase I; lipopolysaccharide core biosynthesis 3794575..3795834 + 419 1790052 rfaL b3622 M COG3307 O-antigen ligase; lipopolysaccharide core biosynthesis 3795866..3796939 - 357 1790053 rfaK b3623 M COG0859 probably hexose transferase; lipopolysaccharide core biosynthesis 3796972..3797823 - 283 1790054 rfaZ b3624 - - lipopolysaccharide core biosynthesis 3797894..3798592 - 232 1790055 rfaY b3625 - - lipopolysaccharide core biosynthesis 3798610..3799626 - 338 1790056 rfaJ b3626 M COG1442 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase 3799666..3800685 - 339 1790057 rfaI b3627 M COG1442 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase 3800685..3801794 - 369 1790058 rfaB b3628 M COG0438 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6- D-galactosyltransferase 3801808..3802743 - 311 1790059 rfaS b3629 - - lipopolysaccharide core biosynthesis 3802780..3803577 - 265 1790060 rfaP b3630 - - lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co 3803570..3804694 - 374 1790061 rfaG b3631 M COG0438 glucosyltransferase I; lipopolysaccharide core biosynthesis 3804691..3805725 - 344 1790062 rfaQ b3632 M COG0859 lipopolysaccharide core biosynthesis 3806167..3807444 + 425 1790064 kdtA b3633 M COG1519 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) 3807452..3807931 + 159 1790065 kdtB b3634 H COG0669 putative enzyme of lipopolysaccharide synthesis 3807970..3808779 - 269 1790066 mutM b3635 L COG0266 formamidopyrimidine DNA glycosylase 3808877..3809044 - 55 1790067 rpmG b3636 J COG0267 50S ribosomal subunit protein L33 3809065..3809301 - 78 1790068 rpmB b3637 J COG0227 50S ribosomal subunit protein L28 3809518..3810192 - 224 1790069 radC b3638 L COG2003 DNA repair protein 3810286..3811578 + 430 1790070 dfp b3639 H COG0452 flavoprotein affecting synthesis of DNA and pantothenate metabolism 3811559..3812014 + 151 1790071 dut b3640 F COG0756 deoxyuridinetriphosphatase 3812079..3812717 + 212 1790072 ttk b3641 K COG1309 putative transcriptional regulator 3812754..3813395 - 213 1790073 pyrE b3642 F COG0461 orotate phosphoribosyltransferase 3813490..3814176 - 228 1790074 rph b3643 J COG0689 RNase PH 3814303..3815166 + 287 1790075 yicC b3644 S COG1561 putative alpha helix protein 3815375..3816211 + 278 1790076 dinD b3645 - - DNA-damage-inducible protein 3816447..3817118 + 223 1790078 yicG b3646 S COG2860 orf, hypothetical protein 3817115..3818803 - 562 1790079 yicF b3647 L COG0272 putative enzyme 3819055..3819678 + 207 1790080 gmk b3648 F COG0194 guanylate kinase 3819733..3820008 + 91 1790081 rpoZ b3649 K COG1758 RNA polymerase, omega subunit 3820027..3822135 + 702 1790082 spoT b3650 T COG0317 (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3822142..3822831 + 229 1790083 spoU b3651 J COG0566 putative RNA methylase 3822837..3824918 + 693 2367254 recG b3652 L COG1200 DNA helicase, resolution of Holliday junctions, branch migration 3825087..3826292 - 401 1790085 gltS b3653 E COG0786 glutamate transport 3826572..3827963 + 463 1790087 yicE b3654 F COG2233 putative transport protein 3828084..3829793 + 569 1790088 yicH b3655 - - orf, hypothetical protein 3829846..3832164 - 772 2367256 yicI b3656 G COG1501 orf, hypothetical protein 3832174..3833613 - 479 2367257 yicJ b3657 G COG2211 putative permease 3834580..3835764 + 394 1790091 yicK b3659 G COG0477 two-module transport protein 3835875..3836798 + 307 1790092 yicL b3660 G COG0697 putative permease transporter 3836802..3837620 - 272 1790093 nlpA b3661 M COG1464 lipoprotein-28 3838176..3839531 - 451 1790095 yicM b3662 G COG2814 putative transport protein 3839577..3840056 - 159 1790096 yicN b3663 - - orf, hypothetical protein 3840082..3841494 - 470 1790097 yicO b3664 R COG2252 orf, hypothetical protein 3841591..3843357 + 588 1790098 yicP b3665 F COG1001 probable adenine deaminase (synthesis xanthine) 3843403..3844794 - 463 2367259 uhpT b3666 G COG2271 hexose phosphate transport protein 3844932..3846254 - 440 2367260 uhpC b3667 G COG2271 regulator of uhpT 3846261..3847766 - 501 1790101 uhpB b3668 T COG0642 sensor histidine protein kinase phosphorylates UhpA 3847763..3848353 - 196 1790102 uhpA b3669 T COG2197 response regulator, positive activator of uhpT transcription (sensor, uhpB) 3848429..3848719 - 96 1790103 ilvN b3670 E COG0440 acetolactate synthase I, valine sensitive, small subunit 3848723..3850411 - 562 1790104 ilvB b3671 E COG0028 acetolactate synthase I,valine-sensitive, large subunit 3850517..3850615 - 32 1790106 ivbL b3672 - - ilvB operon leader peptide 3851543..3852733 + 396 1790107 emrD b3673 G COG0477 2-module integral membrane pump; multidrug resistance 3852741..3853238 - 165 1790108 yidF b3674 - - putative transcriptional regulator 3853235..3853597 - 120 1790109 yidG b3675 - - orf, hypothetical protein 3853587..3853934 - 115 1790110 yidH b3676 S COG2149 orf, hypothetical protein 3854042..3854491 + 149 1790111 yidI b3677 - - orf, hypothetical protein 3854538..3856031 - 497 1790112 yidJ b3678 P COG3119 putative sulfatase 3856028..3857743 - 571 1790113 yidK b3679 E COG0591 putative cotransporter 3857880..3858803 + 307 1790114 yidL b3680 K COG2207 putative ARAC-type regulatory protein 3858976..3859614 - 212 1790115 glvG b3681 G COG1486 probable 6-phospho-beta-glucosidase 3859614..3860099 - 161 1790116 glvB b3682 - - PTS system, arbutin-like IIB component 3860124..3861491 - 455 1790117 glvC b3683 - - PTS system, arbutin-like IIC component 3861526..3862242 + 238 1790118 yidP b3684 K COG2188 putative transcriptional regulator 3862239..3863924 - 561 1790119 yidE b3685 R COG2985 putative transport protein 3864096..3864530 - 144 1790120 ibpB b3686 O COG0071 heat shock protein 3864636..3865049 - 137 1790122 ibpA b3687 O COG0071 heat shock protein 3865280..3865687 + 135 1790123 yidQ b3688 - - orf, hypothetical protein 3865689..3866939 - 416 1790124 yidR b3689 - - orf, hypothetical protein 3866983..3868068 + 361 1790125 yidS b3690 C COG0644 orf, hypothetical protein 3868065..3869402 - 445 1790126 dgoT b3691 G COG0477 D-galactonate transport 3869477..3871240 - 587 2367262 dgoA b3692 G COG0800 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase 3871224..3872102 - 292 1790128 dgoK b3693 - - 2-oxo-3-deoxygalactonate kinase 3872099..3872395 - 98 2367263 b3694 b3694 - - putative FADA-type transcriptional regulator 3872401..3872787 - 128 2367264 yidW b3695 K COG2186 regulator protein for dgo operon 3873122..3873793 + 223 1790130 yidX b3696 - - putative replicase EC 2.7.- 3873768..3874580 - 270 2367265 yidA b3697 R COG0561 orf, hypothetical protein 3874695..3875102 - 135 1790133 yidB b3698 - - orf, hypothetical protein 3875333..3877747 - 804 1790134 gyrB b3699 L COG0187 DNA gyrase subunit B, type II topoisomerase, ATPase activity 3877776..3878849 - 357 1790135 recF b3700 L COG1195 ssDNA and dsDNA binding, ATP binding 3878849..3879949 - 366 1790136 dnaN b3701 L COG0592 DNA polymerase III, beta-subunit 3879954..3881357 - 467 2367267 dnaA b3702 L COG0593 DNA biosynthesis; initiation of chromosome replication; can be transcription regulator 3881965..3882105 + 46 1790138 rpmH b3703 J COG0230 50S ribosomal subunit protein L34 3882122..3882481 + 119 1790139 rnpA b3704 J COG0594 RNase P, protein component; protein C5; processes tRNA, 4.5S RNA 3882705..3884351 + 548 1790140 yidC b3705 N COG0706 60 KD inner-membrane protein 3884457..3885821 + 454 2367268 thdF b3706 R COG0486 GTP-binding protein in thiophene and furan oxidation 3886064..3886138 + 24 1790143 tnaL b3707 - - tryptophanase leader peptide 3886344..3887774 + 476 1790144 tnaA b3708 E COG3033 tryptophanase 3887865..3889112 + 415 1790145 tnaB b3709 E COG0814 low affinity tryptophan permease 3889244..3890419 + 391 1790146 yidY b3710 G COG0477 putative transport protein 3890394..3891353 + 319 1790147 yidZ b3711 K COG0583 putative transcriptional regulator LYSR-type 3891498..3892259 + 253 1790148 yieE b3712 - - orf, hypothetical protein 3892281..3892847 + 188 1790149 yieF b3713 R COG0431 orf, hypothetical protein 3892901..3894238 - 445 1790150 yieG b3714 R COG2252 putative membrane / transport protein 3894403..3895068 + 221 1790151 yieH b3715 R COG0637 putative phosphatase 3895135..3895602 + 155 1790152 yieI b3716 - - orf, hypothetical protein 3895651..3896238 + 195 1790153 yieJ b3717 S COG3196 orf, hypothetical protein 3896311..3896952 - 213 1790155 yieK b3718 G COG0363 putative isomerase 3897036..3898238 - 400 1790156 yieL b3719 P COG2382 putative xylanase 3898232..3899848 - 538 1790157 yieC b3720 - - putative receptor protein 3899917..3901329 - 470 2367270 bglB b3721 G COG2723 phospho-beta-glucosidase B; cryptic 3901348..3903225 - 625 1790159 bglF b3722 G COG1263 PTS system beta-glucosides, enzyme II, cryptic 3903359..3904195 - 278 1790160 bglG b3723 - - positive regulation of bgl operon 3904481..3905206 - 241 1790161 phoU b3724 P COG0704 negative regulator for pho regulon and putative enzyme in phosphate metabolism 3905221..3905994 - 257 1790162 pstB b3725 P COG1117 ATP-binding component of high-affinity phosphate-specific transport system 3906177..3907067 - 296 1790163 pstA b3726 P COG0581 high-affinity phosphate-specific transport system 3907067..3908026 - 319 1790164 pstC b3727 P COG0573 high-affinity phosphate-specific transport system, cytoplasmic membrane component 3908113..3909153 - 346 2367271 pstS b3728 P COG0226 high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein 3909467..3911296 - 609 1790167 glmS b3729 M COG0449 L-glutamine:D-fructose-6-phosphate aminotransferase 3911458..3912828 - 456 1790168 glmU b3730 M COG1207 N-acetyl glucosamine-1-phosphate uridyltransferase 3913181..3913600 - 139 1790169 atpC b3731 C COG0355 membrane-bound ATP synthase, F1 sector, epsilon-subunit 3913621..3915003 - 460 1790170 atpD b3732 C COG0055 membrane-bound ATP synthase, F1 sector, beta-subunit 3915030..3915893 - 287 1790171 atpG b3733 C COG0224 membrane-bound ATP synthase, F1 sector, gamma-subunit 3915944..3917485 - 513 1790172 atpA b3734 C COG0056 membrane-bound ATP synthase, F1 sector, alpha-subunit 3917498..3918031 - 177 1790173 atpH b3735 C COG0712 membrane-bound ATP synthase, F1 sector, delta-subunit 3918046..3918516 - 156 1790174 atpF b3736 C COG0711 membrane-bound ATP synthase, F0 sector, subunit b 3918578..3918817 - 79 1790175 atpE b3737 C COG0636 membrane-bound ATP synthase, F0 sector, subunit c 3918864..3919679 - 271 1790176 atpB b3738 C COG0356 membrane-bound ATP synthase, F0 sector, subunit a 3919688..3920080 - 130 1790177 atpI b3739 C COG3312 membrane-bound ATP synthase, dispensable protein, affects expression of atpB 3920685..3921308 - 207 1790179 gidB b3740 M COG0357 glucose-inhibited division; chromosome replication? 3921372..3923261 - 629 2367273 gidA b3741 D COG0445 glucose-inhibited division; chromosome replication? 3923640..3924083 - 147 1790181 mioC b3742 C COG0716 initiation of chromosome replication 3924173..3924631 - 152 1790182 asnC b3743 K COG1522 regulator for asnA, asnC and gidA 3924783..3925775 + 330 1790183 asnA b3744 E COG2502 asparagine synthetase A 3925780..3927063 - 427 2367274 yieM b3745 S COG2425 orf, hypothetical protein 3927224..3928744 - 506 2367275 yieN b3746 R COG0714 putative 2-component regulator 3928943..3930502 + 519 1790187 kup b3747 P COG3158 low affinity potassium transport system 3930941..3931396 + 151 1790189 rbsD b3748 G COG1869 D-ribose high-affinity transport system; membrane-associated protein 3931404..3932909 + 501 1790190 rbsA b3749 G COG1129 ATP-binding component of D-ribose high-affinity transport system 3932914..3933879 + 321 1790191 rbsC b3750 G COG1172 D-ribose high-affinity transport system 3933904..3934794 + 296 1790192 rbsB b3751 G COG1879 D-ribose periplasmic binding protein 3934920..3935849 + 309 1790193 rbsK b3752 G COG0524 ribokinase 3935853..3936845 + 330 1790194 rbsR b3753 K COG1609 regulator for rbs operon 3936811..3938238 - 475 1790195 yieO b3754 G COG0477 putative transport protein 3938261..3938806 - 181 1790196 yieP b3755 K COG2186 orf, hypothetical protein 3944752..3945348 - 198 1790198 yifA b3762 - - orf, hypothetical protein 3945189..3945590 - 133 1790199 pssR b3763 K COG0583 regulator of pssA 3945709..3946047 + 112 2367277 yifE b3764 S COG3085 orf, hypothetical protein 3946072..3947622 - 516 1790201 yifB b3765 O COG0606 putative 2-component regulator 3947945..3948043 + 32 1790202 ilvL b3766 - - ilvGEDA operon leader peptide 3948183..3949166 + 327 1790203 ilvG_1 b3767 - - acetolactate synthase II, large subunit, cryptic, interrupted 3949824..3950087 + 87 1790204 ilvM b3769 E COG0440 acetolactate synthase II, valine insensitive, small subunit 3950107..3951036 + 309 1790205 ilvE b3770 E COG0115 branched-chain amino-acid aminotransferase 3951132..3952949 + 605 1790206 ilvD b3771 E COG0129 dihydroxyacid dehydratase 3952952..3954496 + 514 1790207 ilvA b3772 E COG1171 threonine deaminase (dehydratase) 3954548..3955441 - 297 1790208 ilvY b3773 K COG0583 positive regulator for ilvC 3955591..3957066 + 491 1790210 ilvC b3774 E COG0059 ketol-acid reductoisomerase 3957150..3957431 - 93 1790211 ppiC b3775 O COG0760 peptidyl-prolyl cis-trans isomerase C (rotamase C) 3957627..3957902 - 91 2367279 b3776 b3776 - - orf, hypothetical protein 3957857..3958117 - 86 2367280 yifN b3777 - - orf, hypothetical protein 3958292..3960313 + 673 1790212 rep b3778 L COG0210 rep helicase, a single-stranded DNA dependent ATPase 3960360..3961844 - 494 1790213 gppA b3779 F COG0248 guanosine pentaphosphatase; exopolyphosphatase 3961980..3963245 - 421 1790214 rhlB b3780 L COG0513 putative ATP-dependent RNA helicase 3963322..3963705 + 127 1790215 trxA b3781 O COG0526 thioredoxin 1 3963846..3963947 + 33 1790216 rhoL b3782 - - rho operon leader peptide 3964032..3965291 + 419 1790217 rho b3783 K COG1158 transcription termination factor Rho; polarity suppressor 3965531..3966634 + 367 1790218 rfe b3784 M COG0472 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase; synthesis of enterobacterial common antigen (ECA) 3966643..3967692 + 349 2367281 wzzE b3785 - - putative transport protein 3967706..3968875 + 389 2367283 wecB b3786 M COG0381 UDP-N-acetyl glucosamine -2-epimerase; synthesis of enterobacterial common antigen (ECA) 3968872..3970134 + 420 2367284 wecC b3787 M COG0677 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA) 3970134..3971201 + 355 1790223 rffG b3788 M COG1088 dTDP-glucose 4,6-dehydratase 3971220..3972101 + 293 1790224 rffH b3789 M COG1209 glucose-1-phosphate thymidylyltransferase 3972208..3972753 + 181 1790225 wecD b3790 K COG0454 orf, hypothetical protein 3972758..3973888 + 376 2367285 wecE b3791 M COG0399 putative regulator 3973890..3975140 + 416 1790227 wzxE b3792 R COG2244 putative cytochrome 3975137..3975361 + 74 2367286 yifM_1 b4404 - - orf, conceptual translation in SwissProt is fused with b4405 3975603..3976217 + 204 2367287 yifM_2 b4405 - - orf, conceptual translation in SwissProt is fused with b4404 3976214..3977566 + 450 2367288 wecF b3793 - - TDP-Fuc4NAc:lipidII transferase; synthesis of enterobacterial common antigen (ECA) 3977569..3978309 + 246 2367289 wecG b3794 M COG1922 probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA) 3978500..3979885 + 461 2367290 yifK b3795 E COG1113 putative amino acid/amine transport protein 3980571..3981806 + 411 2367292 aslB b3800 R COG0641 putative arylsulfatase regulator 3981965..3983620 - 551 1790233 aslA b3801 P COG3119 arylsulfatase 3984299..3985495 - 398 1790234 hemY b3802 H COG3071 a late step of protoheme IX synthesis 3985498..3986679 - 393 1790235 hemX b3803 S COG2959 uroporphyrinogen III methylase 3986701..3987441 - 246 1790236 hemD b3804 H COG1587 uroporphyrinogen III synthase 3987438..3988400 - 320 2367293 hemC b3805 H COG0181 porphobilinogen deaminase = hydroxymethylbilane synthase 3988766..3991312 + 848 1790238 cyaA b3806 F COG3072 adenylate cyclase 3991352..3991672 - 106 1790239 cyaY b3807 P COG1965 orf, hypothetical protein 3991463..3991948 + 161 1790240 b3808 b3808 - - orf, hypothetical protein 3992372..3993199 + 275 1790242 dapF b3809 E COG0253 diaminopimelate epimerase 3993196..3993903 + 235 1790243 yigA b3810 S COG3159 orf, hypothetical protein 3993900..3994796 + 298 1790244 xerC b3811 L COG0582 site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division 3994796..3995512 + 238 2367295 yigB b3812 R COG1011 putative phosphatase 3995596..3997758 + 720 2367296 uvrD b3813 L COG0210 DNA-dependent ATPase I and helicase II 3997905..3998204 - 99 1790247 b3814 b3814 - - orf, hypothetical protein 3998183..3998668 - 161 1790248 yigE b3815 - - orf, hypothetical protein 3999038..3999988 + 316 2367297 corA b3816 P COG0598 Mg2+ transport, system I 4000031..4000411 - 126 1790250 yigF b3817 - - orf, hypothetical protein 4000425..4000841 - 138 1790251 yigG b3818 - - orf, hypothetical protein 4000900..4001802 - 300 1790252 rarD b3819 R COG2962 orf, hypothetical protein 4001841..4002326 - 161 2367298 yigI b3820 Q COG2050 orf, hypothetical protein 4002473..4003342 + 289 2367300 pldA b3821 M COG2829 outer membrane phospholipase A 4003469..4005301 + 610 2367301 recQ b3822 L COG0514 ATP-dependent DNA helicase 4005616..4005984 + 122 2367302 yigJ b3823 E COG1280 orf, hypothetical protein 4006046..4006462 - 138 1790258 yigK b3824 E COG1280 orf, hypothetical protein 4006776..4007798 + 340 2367303 pldB b3825 I COG2267 lysophospholipase L(2) 4007918..4008433 + 171 1790260 yigL b3826 - - orf, hypothetical protein 4008666..4009565 + 299 1790261 yigM b3827 G COG0697 orf, hypothetical protein 4009453..4010406 - 317 1790262 metR b3828 K COG0583 regulator for metE and metH 4010643..4012904 + 753 2367304 metE b3829 E COG0620 tetrahydropteroyltriglutamate methyltransferase 4012721..4013719 - 332 2367305 ysgA b3830 Q COG0412 putative enzyme 4014018..4014779 + 253 1790265 udp b3831 F COG2820 uridine phosphorylase 4014920..4016347 + 475 1790266 yigN b3832 S COG1322 putative alpha helix chain 4016442..4017197 + 251 2367307 ubiE b3833 H COG2226 2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone 4017211..4017816 + 201 2367308 yigP b3834 S COG3165 orf, hypothetical protein 4017813..4019453 + 546 2367309 yigR b3835 R COG0661 orf, hypothetical protein 4019490..4019801 + 103 2367310 b3836 b3836 N COG1826 orf, hypothetical protein 4019665..4020006 + 113 2367311 b3837 b3837 - - putative histone 4019885..4020322 + 145 2367312 b3838 b3838 N COG1826 orf, hypothetical protein 4020325..4021101 + 258 2367313 yigU b3839 N COG0805 orf, hypothetical protein 4021131..4021751 + 206 1790274 yigW_1 b3840 - - orf, hypothetical protein 4021585..4021926 + 113 1790275 yigW_2 b3841 - - orf, hypothetical protein 4021923..4022411 - 162 1790276 rfaH b3842 K COG0250 transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin 4022578..4024071 + 497 1790277 yigC b3843 - - putative oxidoreductase 4024117..4024818 + 233 2367314 ubiB b3844 H COG0543 ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase) 4025199..4026362 - 387 2367316 fadA b3845 I COG0183 thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase 4026372..4028561 - 729 1790281 fadB b3846 I COG1024 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase 4028751..4030082 + 443 1790282 pepQ b3847 E COG0006 proline dipeptidase 4030079..4030696 + 205 1790283 yigZ b3848 S COG1739 orf, hypothetical protein 4030735..4032033 + 432 2367317 trkH b3849 P COG0168 potassium uptake, requires TrkE 4032197..4032742 + 181 1790285 hemG b3850 C COG0716 protoporphyrin oxidase 4038486..4038998 - 170 1790287 mobB b3856 H COG1763 molybdopterin-guanine dinucleotide biosynthesis protein B 4038995..4039579 - 194 1790288 mobA b3857 H COG0746 molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar 4039649..4039918 + 89 1790289 yihD b3858 S COG3084 orf, hypothetical protein 4039996..4040982 + 328 1790290 yihE b3859 R COG2334 orf, hypothetical protein 4040999..4041625 + 208 1790291 dsbA b3860 O COG0526 protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction 4041737..4043209 + 490 2367319 yihF b3861 - - putative GTP-binding protein 4043250..4044182 - 310 1790293 yihG b3862 I COG0204 putative endonuclease 4044546..4047332 + 928 1790294 polA b3863 L COG0749 DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease 4047713..4048312 - 199 1790296 yihA b3865 R COG0218 orf, hypothetical protein 4048927..4049436 + 169 1790297 yihI b3866 S COG3078 orf, hypothetical protein 4049619..4050998 + 459 1790298 hemN b3867 H COG0635 O2-independent coproporphyrinogen III oxidase 4051449..4052858 - 469 1790299 glnG b3868 T COG2204 response regulator for gln (sensor glnL) (nitrogen regulator I, NRI) 4052870..4053919 - 349 1790300 glnL b3869 T COG0642 histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) 4054205..4055614 - 469 1790301 glnA b3870 E COG0174 glutamine synthetase 4055987..4057762 + 591 1790302 yihK b3871 N COG1217 putative GTP-binding factor 4058026..4058736 + 236 1790304 yihL b3872 K COG2188 putative transcriptional regulator 4058744..4059724 + 326 1790305 yihM b3873 - - orf, hypothetical protein 4059826..4061091 + 421 1790306 yihN b3874 G COG0477 putative resistance protein (transport) 4061182..4061874 - 230 1790307 yshA b3875 G COG2211 orf, hypothetical protein 4061889..4063352 - 487 2367321 yihO b3876 - - putative permease 4063389..4064795 - 468 2367322 yihP b3877 G COG2211 putative permease 4064820..4066856 - 678 2367323 yihQ b3878 G COG1501 putative glycosidase 4067055..4067981 - 308 1790311 yihR b3879 G COG2017 putative aldose-1-epimerase (EC 5.1.3.3) 4068095..4069351 - 418 1790313 yihS b3880 G COG2942 orf, hypothetical protein 4069353..4070231 - 292 1790314 yihT b3881 - - putative aldolase 4070255..4071151 - 298 1790315 yihU b3882 I COG2084 putative dehydrogenase 4071313..4072215 + 300 1790316 yihV b3883 G COG0524 putative kinase 4072225..4073034 + 269 1790317 yihW b3884 K COG1349 putative DEOR-type transcriptional regulator 4073112..4073732 + 206 1790318 yihX b3885 R COG1011 putative phosphatase 4073726..4074598 + 290 1790319 rbn b3886 J COG1295 tRNA processing exoribonuclease BN 4074595..4075032 + 145 1790320 yihZ b3887 J COG1490 orf, hypothetical protein 4075029..4076018 + 329 1790321 yiiD b3888 K COG0454 putative acetyltransferase (EC 2.3.1.18) 4076844..4077089 + 81 1790322 yiiE b3889 - - orf, hypothetical protein 4077307..4077549 + 80 1790323 yiiF b3890 - - orf, hypothetical protein 4077879..4078808 - 309 1790324 fdhE b3891 O COG3058 affects formate dehydrogenase-N 4078805..4079440 - 211 1790325 fdoI b3892 C COG2864 formate dehydrogenase, cytochrome B556 (FDO) subunit 4079437..4080339 - 300 1790326 fdoH b3893 C COG0437 formate dehydrogenase-O, iron-sulfur subunit 4080352..4083402 - 1016 3868720 fdoG b3894 C COG0243 formate dehydrogenase-O, major subunit 4083596..4084429 + 277 1790329 fdhD b3895 C COG1526 affects formate dehydrogenase-N 4084582..4085637 + 351 1790330 yiiG b3896 - - orf, hypothetical protein 4085688..4087436 - 582 1790331 frvR b3897 - - putative frv operon regulatory protein 4087436..4088506 - 356 1790332 frvX b3898 G COG1363 frv operon protein 4088496..4089953 - 485 1790333 frvB b3899 G COG1299 PTS system, fructose-like enzyme IIBC component 4089958..4090404 - 148 2367327 frvA b3900 G COG1762 PTS system, fructose-specific IIA component 4090705..4091019 - 104 1790335 yiiL b3901 S COG3254 orf, hypothetical protein 4091029..4091853 - 274 1790336 rhaD b3902 G COG0235 rhamnulose-phosphate aldolase 4092304..4093563 - 419 1790337 rhaA b3903 - - L-rhamnose isomerase 4093560..4095029 - 489 1790338 rhaB b3904 G COG1070 rhamnulokinase 4095317..4096153 + 278 1790339 rhaS b3905 K COG2207 positive regulator for rhaBAD operon 4096137..4097075 + 312 1790340 rhaR b3906 K COG2207 positive regulator for rhaRS operon 4097072..4098106 - 344 1790341 rhaT b3907 G COG0697 rhamnose transport 4098391..4099011 + 206 1790342 sodA b3908 P COG0605 superoxide dismutase, manganese 4099262..4100254 + 330 1790343 kdgT b3909 - - 2-keto-3-deoxy-D-gluconate transport system 4100373..4101077 + 234 1790345 yiiM b3910 S COG2258 orf, hypothetical protein 4101183..4102556 - 457 1790346 cpxA b3911 T COG0642 probable sensor protein (histidine protein kinase), acting on arcA 4102553..4103251 - 232 2367329 cpxR b3912 T COG0745 transcriptional regulator in 2-component system 4103398..4103547 + 49 2367330 b3913 b3913 - - orf, hypothetical protein 4103532..4103900 + 122 2367331 b3914 b3914 - - orf, hypothetical protein 4104049..4104951 + 300 1790349 yiiP b3915 P COG0053 putative transport system permease protein 4105132..4106094 + 320 1790350 pfkA b3916 G COG0205 6-phosphofructokinase I 4106414..4107403 + 329 1790351 sbp b3917 P COG1613 periplasmic sulfate-binding protein 4107510..4108265 + 251 1790352 cdh b3918 I COG2134 CDP-diacylglycerol phosphotidylhydrolase 4108320..4109087 - 255 1790353 tpiA b3919 G COG0149 triosephosphate isomerase 4109195..4109794 - 199 1790354 yiiQ b3920 - - orf, hypothetical protein 4109895..4110335 + 146 1790355 yiiR b3921 S COG3152 orf, hypothetical protein 4110547..4110846 + 99 1790357 yiiS b3922 - - orf, hypothetical protein 4110873..4111301 + 142 1790358 yiiT b3923 T COG0589 putative regulator 4111306..4112052 - 248 1790359 fpr b3924 C COG1018 ferredoxin-NADP reductase 4112149..4113159 - 336 1790360 glpX b3925 G COG1494 unknown function in glycerol metabolism 4113294..4114802 - 502 1790361 glpK b3926 C COG0554 glycerol kinase 4114825..4115670 - 281 1790362 glpF b3927 G COG0580 facilitated diffusion of glycerol 4116095..4116340 + 81 1790363 yiiU b3928 S COG3074 orf, hypothetical protein 4116425..4116910 - 161 1790364 menG b3929 H COG0684 menaquinone biosynthesis, unknown 4117003..4117929 - 308 1790365 menA b3930 H COG1575 1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone 4117996..4119327 - 443 1790366 hslU b3931 O COG1220 heat shock protein hslVU, ATPase subunit, homologous to chaperones 4119337..4119867 - 176 1790367 hslV b3932 O COG0638 heat shock protein hslVU, proteasome-related peptidase subunit 4119960..4120919 - 319 1790368 ftsN b3933 D COG3087 essential cell division protein 4121011..4122036 - 341 1790369 cytR b3934 K COG1609 regulator for deo operon, udp, cdd, tsx, nupC, and nupG 4122192..4124390 - 732 1790370 priA b3935 L COG1198 primosomal protein N'(= factor Y)(putative helicase) 4124593..4124805 + 70 1790371 rpmE b3936 J COG0254 50S ribosomal subunit protein L31 4124866..4125474 - 202 1790372 yiiX b3937 - - orf, hypothetical protein 4125658..4125975 - 105 1790373 metJ b3938 E COG3060 repressor of all met genes but metF 4126252..4127412 + 386 1790375 metB b3939 E COG0626 cystathionine gamma-synthase 4127415..4129847 + 810 1790376 metL b3940 E COG0527 aspartokinase II and homoserine dehydrogenase II 4130196..4131086 + 296 1790377 metF b3941 E COG0685 5,10-methylenetetrahydrofolate reductase 4131415..4133595 + 726 1790378 katG b3942 P COG0376 catalase; hydroperoxidase HPI(I) 4133655..4134593 + 312 1790379 yijE b3943 G COG0697 orf, hypothetical protein 4134620..4135237 - 205 1790380 yijF b3944 - - orf, hypothetical protein 4135512..4136654 - 380 1790381 gldA b3945 C COG0371 glycerol dehydrogenase, (NAD) 4136626..4137288 - 220 1790382 talC b3946 G COG0176 putative transaldolase 4137300..4139435 - 711 1790383 ptsA b3947 G COG1762 PEP-protein phosphotransferase system enzyme I 4139437..4139766 + 109 1790384 yijI b3948 - - orf, hypothetical protein 4140109..4141188 + 359 1790386 frwC b3949 G COG1299 PTS system, fructose-like enzyme II component 4141203..4141523 + 106 1790387 frwB b3950 G COG1445 PTS system fructose-like IIB component 1 4141574..4143871 + 765 1790388 pflD b3951 C COG1882 formate acetyltransferase 2 4143837..4144715 + 292 1790389 pflC b3952 O COG1180 probable pyruvate formate lyase activating enzyme 2 4144717..4145058 + 113 1790390 frwD b3953 G COG1445 PTS system fructose-like IIB component 2 4145045..4145896 - 283 1790391 yijO b3954 K COG2207 putative ARAC-type regulatory protein 4146111..4147844 - 577 1790392 yijP b3955 R COG2194 orf, hypothetical protein 4148026..4150677 - 883 1790393 ppc b3956 C COG2352 phosphoenolpyruvate carboxylase 4151275..4152426 - 383 1790395 argE b3957 E COG0624 acetylornithine deacetylase 4152580..4153584 + 334 1790396 argC b3958 E COG0002 N-acetyl-gamma-glutamylphosphate reductase 4153592..4154368 + 258 1790397 argB b3959 E COG0548 acetylglutamate kinase 4154429..4155802 + 457 1790398 argH b3960 E COG0165 argininosuccinate lyase 4156069..4156986 + 305 1790399 oxyR b3961 K COG0583 activator, hydrogen peroxide-inducible genes 4156969..4158303 - 444 1790400 udhA b3962 C COG1249 putative oxidoreductase 4158646..4159350 + 234 1790401 yijC b3963 K COG1309 orf, hypothetical protein 4159350..4159709 + 119 1790402 yijD b3964 - - orf, hypothetical protein 4159749..4160849 - 366 1790403 trmA b3965 J COG2265 tRNA (uracil-5-)-methyltransferase 4161218..4163062 + 614 1790405 btuB b3966 P COG1629 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 4162995..4163864 + 289 1790406 murI b3967 M COG0796 glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan 4169636..4170664 + 342 1790407 murB b3972 M COG0812 UDP-N-acetylenolpyruvoylglucosamine reductase 4170661..4171626 + 321 1790408 birA b3973 H COG0340 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor 4171655..4172605 - 316 1790409 coaA b3974 H COG1072 pantothenate kinase 4172792..4172947 - 51 1790411 b3975 b3975 - - orf, hypothetical protein 4173523..4174707 + 394 1790412 tufB b3980 J COG0050 protein chain elongation factor EF-Tu (duplicate of tufA) 4174937..4175320 + 127 1790413 secE b3981 N COG0690 preprotein translocase 4175322..4175867 + 181 1790414 nusG b3982 K COG0250 component in transcription antitermination 4176025..4176453 + 142 2367334 rplK b3983 J COG0080 50S ribosomal subunit protein L11 4176457..4177161 + 234 1790416 rplA b3984 J COG0081 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 4177574..4178071 + 165 1790417 rplJ b3985 J COG0244 50S ribosomal subunit protein L10 4178138..4178503 + 121 1790418 rplL b3986 J COG0222 50S ribosomal subunit protein L7/L12 4178823..4182851 + 1342 1790419 rpoB b3987 K COG0085 RNA polymerase, beta subunit 4182928..4187151 + 1407 2367335 rpoC b3988 K COG0086 RNA polymerase, beta prime subunit 4187364..4187903 + 179 1790422 htrC b3989 - - heat shock protein htrC 4188313..4189446 - 377 1790423 thiH b3990 H COG1060 thiamin biosynthesis, thiazole moiety 4189443..4190288 - 281 1790424 thiG b3991 F COG2022 thiamin biosynthesis, thiazole moiety 4190399..4191136 - 245 1790425 thiF b3992 H COG0476 thiamin biosynthesis, thiazole moiety 4191147..4191782 - 211 1790426 thiE b3993 H COG0352 thiamin biosynthesis, thiazole moiety 4191782..4193677 - 631 1790427 thiC b3994 H COG0422 thiamin biosynthesis, pyrimidine moiety 4193910..4194386 - 158 1790428 yjaE b3995 K COG3160 putative transcriptional regulator 4194481..4195254 + 257 1790429 yjaD b3996 L COG2816 orf, hypothetical protein 4195294..4196358 + 354 2367337 hemE b3997 H COG0407 uroporphyrinogen decarboxylase 4196362..4197039 + 225 1790431 nfi b3998 L COG1515 endonuclease V (deoxyinosine 3'endoduclease) 4197082..4197672 + 196 1790432 yjaG b3999 S COG3068 orf, hypothetical protein 4197859..4198131 + 90 1790433 hupA b4000 L COG0776 DNA-binding protein HU-alpha (HU-2) 4198144..4198839 + 231 1790434 yjaH b4001 - - orf, hypothetical protein 4198841..4199407 - 188 1790435 yjaI b4002 - - orf, hypothetical protein 4199504..4200901 + 465 1790436 hydH b4003 T COG0642 sensor kinase for HydG, hydrogenase 3 activity 4200898..4202223 + 441 1790437 hydG b4004 T COG2204 response regulator of hydrogenase 3 activity (sensor HydH) 4202220..4203509 - 429 1790438 purD b4005 F COG0151 phosphoribosylglycinamide synthetase = GAR synthetase 4203521..4205110 - 529 1790439 purH b4006 F COG0138 phosphoribosylaminoimidazolecarboxamideformyltransferase = AICAR formyltransferase; IMP cyclohydrolase 4210813..4211196 + 127 1790441 yjaA b4011 - - orf, hypothetical protein 4211259..4211702 - 147 1790442 yjaB b4012 K COG0454 orf, hypothetical protein 4211859..4212788 + 309 1790443 metA b4013 E COG1897 homoserine transsuccinylase 4213057..4214658 + 533 1790444 aceB b4014 C COG2225 malate synthase A 4214688..4215992 + 434 1790445 aceA b4015 C COG2224 isocitrate lyase 4216175..4217911 + 578 1790446 aceK b4016 - - isocitrate dehydrogenase kinase/phosphatase 4217880..4220066 - 728 1790447 arp b4017 R COG0666 regulator of acetyl CoA synthetase 4220383..4221246 - 287 1790449 iclR b4018 K COG1414 repressor of aceBA operon 4221407..4225090 + 1227 1790450 metH b4019 E COG0646 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF 4225310..4226941 + 543 1790451 yjbB b4020 P COG1283 putative alpha helix protein 4227032..4227721 - 229 1790452 pepE b4021 E COG3340 peptidase E, a dipeptidase where amino-terminal residue is aspartate 4227933..4228805 + 290 1790453 yjbC b4022 J COG1187 orf, hypothetical protein 4228938..4229210 - 90 1790454 yjbD b4023 - - orf, hypothetical protein 4229463..4230812 - 449 1790455 lysC b4024 E COG0527 aspartokinase III, lysine sensitive 4231337..4232986 + 549 1790457 pgi b4025 G COG0166 glucosephosphate isomerase 4233485..4233727 + 80 1790458 yjbE b4026 - - orf, hypothetical protein 4233811..4234479 + 222 1790459 yjbF b4027 - - orf, hypothetical protein 4234476..4235213 + 245 1790460 yjbG b4028 - - orf, hypothetical protein 4235213..4237309 + 698 1790461 yjbH b4029 - - orf, hypothetical protein 4237904..4238314 + 136 1790462 yjbA b4030 S COG3223 orf, hypothetical protein 4238358..4239833 - 491 1790463 xylE b4031 G COG0477 xylose-proton symport 4240205..4241095 - 296 1790464 malG b4032 G COG0395 part of maltose permease, inner membrane 4241110..4242654 - 514 1790465 malF b4033 G COG1175 part of maltose permease, periplasmic 4242808..4243998 - 396 1790466 malE b4034 G COG2182 periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis 4244363..4245478 + 371 1790467 malK b4035 G COG1130 ATP-binding component of transport system for maltose 4245550..4246890 + 446 1790469 lamB b4036 - - phage lambda receptor protein; maltose high-affinity receptor 4247133..4248053 + 306 1790470 malM b4037 - - periplasmic protein of mal regulon 4248534..4249862 + 442 1790471 yjbI b4038 S COG1357 orf, hypothetical protein 4249974..4250582 + 202 1790472 ubiC b4039 H COG3161 chorismate lyase 4250595..4251467 + 290 1790473 ubiA b4040 H COG0382 4-hydroxybenzoate-octaprenyltransferase 4251622..4254105 - 827 1790474 plsB b4041 I COG2937 glycerol-3-phosphate acyltransferase 4254216..4254584 + 122 1790475 dgkA b4042 M COG0818 diacylglycerol kinase 4254694..4255302 + 202 1790476 lexA b4043 K COG1974 regulator for SOS(lexA) regulon 4255321..4256700 + 459 1790477 dinF b4044 Q COG0534 DNA-damage-inducible protein F 4256816..4257025 + 69 1790479 yjbJ b4045 S COG3237 orf, hypothetical protein 4257067..4257642 - 191 1790480 yjbK b4046 P COG0735 putative regulator 4257900..4258154 + 84 1790481 yjbL b4047 - - orf, hypothetical protein 4258178..4258885 + 235 1790482 yjbM b4048 - - orf, hypothetical protein 4259248..4260285 + 345 1790483 yjbN b4049 R COG0042 orf, hypothetical protein 4260209..4260661 + 150 1790484 yjbO b4050 - - orf, hypothetical protein 4260827..4261810 - 327 1790485 qor b4051 C COG0604 quinone oxidoreductase 4261893..4263308 + 471 1790486 dnaB b4052 L COG0305 replicative DNA helicase; part of primosome 4263361..4264440 + 359 1790487 alr b4053 M COG0787 alanine racemase 1 4264693..4265886 + 397 1790488 tyrB b4054 E COG1448 tyrosine aminotransferase, tyrosine repressible 4266993..4267706 + 237 2367341 aphA b4055 - - diadenosine tetraphosphatase 4267817..4268233 + 138 1790491 yjbQ b4056 S COG0432 orf, hypothetical protein 4268237..4268593 + 118 2367342 yjbR b4057 S COG2315 orf, hypothetical protein 4268628..4271450 - 940 2367343 uvrA b4058 L COG0178 excision nuclease subunit A 4271704..4272240 + 178 1790494 ssb b4059 L COG0629 ssDNA-binding protein 4272339..4272689 - 116 1790495 yjcB b4060 - - orf, hypothetical protein 4273050..4274636 + 528 1790496 yjcC b4061 T COG2200 orf, hypothetical protein 4274639..4274962 - 107 1790497 soxS b4062 K COG2207 regulation of superoxide response regulon 4275048..4275512 + 154 1790498 soxR b4063 K COG0789 redox-sensing activator of soxS 4276058..4277407 + 449 1790499 yjcD b4064 R COG2252 orf, hypothetical protein 4277559..4279208 + 549 1790501 yjcE b4065 P COG0025 orf, hypothetical protein 4279362..4280654 - 430 1790502 yjcF b4066 S COG1357 orf, hypothetical protein 4280832..4282481 - 549 1790503 yjcG b4067 E COG0591 putative transport protein 4282478..4282792 - 104 1790504 yjcH b4068 S COG3162 orf, hypothetical protein 4282992..4284950 - 652 1790505 acs b4069 I COG0365 acetyl-CoA synthetase 4285343..4286779 + 478 1790506 nrfA b4070 P COG3303 periplasmic cytochrome c(552): plays a role in nitrite reduction 4286818..4287390 + 190 1790507 nrfB b4071 - - formate-dependent nitrite reductase; a penta-haeme cytochrome c 4287387..4288058 + 223 2367345 nrfC b4072 C COG0437 formate-dependent nitrite reductase; Fe-S centers 4288055..4289011 + 318 1790509 nrfD b4073 P COG3301 formate-dependent nitrate reductase complex; transmembrane protein 4289091..4290749 + 552 1790511 nrfE b4074 O COG1138 formate-dependent nitrite reductase; possible assembly function 4290742..4291125 + 127 1790512 nrfF b4075 O COG3088 part of formate-dependent nitrite reductase complex 4291122..4291718 + 198 1790513 nrfG b4076 R COG0457 part of formate-dependent nitrite reductase complex 4292060..4293373 + 437 1790514 gltP b4077 C COG1301 glutamate-aspartate symport protein 4294015..4294704 - 229 1790515 yjcO b4078 R COG0790 orf, hypothetical protein 4294798..4296945 - 715 3868721 fdhF b4079 C COG0243 selenopolypeptide subunit of formate dehydrogenase H 4297143..4298609 - 488 2367348 yjcP b4080 M COG1538 putative enzyme 4298606..4300516 - 636 1790518 yjcQ b4081 - - putative enzyme 4300657..4301688 - 343 1790519 yjcR b4082 Q COG1566 putative membrane protein 4302191..4304188 - 665 2367350 yjcS b4083 Q COG2015 orf, hypothetical protein 4304449..4305378 - 309 1790522 yjcT b4084 K COG1940 putative NAGC-like transcriptional regulator 4305362..4306057 - 231 1790523 yjcU b4085 G COG0036 putative epimerase 4306068..4307048 - 326 1790524 yjcV b4086 G COG1172 putative transport system permease protein 4307027..4308559 - 510 1790525 yjcW b4087 G COG1129 putative ATP-binding component of a transport system 4308686..4309621 - 311 1790526 yjcX b4088 G COG1879 putative LACI-type transcriptional regulator 4309680..4310603 - 307 1790527 rpiR b4089 K COG1737 transcriptional repressor of rpiB expression 4310929..4311378 + 149 1790528 rpiB b4090 G COG0698 ribose 5-phosphate isomerase B 4311389..4311796 - 135 1790529 phnQ b4091 - - orf, hypothetical protein 4311922..4312680 - 252 1790530 phnP b4092 R COG1235 phosphonate metabolism 4312682..4313116 - 144 1790531 phnO b4093 K COG0454 putative regulator, phn operon 4313103..4313660 - 185 1790532 phnN b4094 F COG0194 ATP-binding component of phosphonate transport 4313660..4314796 - 378 1790533 phnM b4095 P COG3454 phosphonate metabolism 4314793..4315473 - 226 1790534 phnL b4096 R COG1136 ATP-binding component of phosphonate transport 4315584..4316342 - 252 1790535 phnK b4097 E COG1101 ATP-binding component of phosphonate transport 4316339..4317184 - 281 1790536 phnJ b4098 P COG3627 phosphonate metabolism 4317177..4318241 - 354 1790537 phnI b4099 P COG3626 phosphonate metabolism 4318241..4318825 - 194 1790538 phnH b4100 P COG3625 phosphonate metabolism 4318822..4319274 - 150 1790539 phnG b4101 P COG3624 phosphonate metabolism 4319275..4320000 - 241 1790540 phnF b4102 K COG2188 putative transcriptional regulator 4320021..4320242 - 73 1790541 b4103 b4103 - - orf, hypothetical protein 4320239..4320859 - 206 1790542 phnE b4104 - - membrane channel protein component of Pn transporter 4320914..4321930 - 338 1790543 phnD b4105 P COG3221 periplasmic binding protein component of Pn transporter 4321955..4322743 - 262 1790544 phnC b4106 P COG3638 ATP-binding component of phosphonate transport 4322876..4323319 - 147 1790546 phnB b4107 S COG2764 orf, hypothetical protein 4323977..4324312 - 111 1790547 phnA b4108 P COG2824 orf, hypothetical protein 4324713..4326941 + 742 1790548 yjdA b4109 R COG0699 putative vimentin 4326971..4327816 + 281 1790549 yjcZ b4110 - - orf, hypothetical protein 4328080..4329582 + 500 1790550 proP b4111 G COG0477 low-affinity transport system; proline permease II 4329759..4330850 - 363 1790551 basS b4112 T COG0642 sensor protein for basR 4330860..4331528 - 222 1790552 basR b4113 T COG0745 transcriptional regulatory protein, member of 2-component regulatory system, 4331525..4333198 - 557 1790553 yjdB b4114 R COG2194 orf, hypothetical protein 4333272..4334609 - 445 2367353 yjdE b4115 E COG0531 putative amino acid/amine transport protein, cryptic 4334746..4335507 - 253 1790557 adiY b4116 K COG2207 putative ARAC-type regulatory protein 4335832..4338102 - 756 1790558 adiA b4117 E COG1982 biodegradative arginine decarboxylase 4338298..4339206 - 302 1790559 melR b4118 K COG2207 regulator of melibiose operon 4339489..4340844 + 451 1790560 melA b4119 G COG1486 alpha-galactosidase 4340959..4342368 + 469 1790561 melB b4120 G COG2211 melibiose permease II 4342507..4343136 - 209 1790562 yjdF b4121 - - orf, hypothetical protein 4343258..4344904 - 548 1790564 fumB b4122 C COG1951 fumarase B= fumarate hydratase Class I; anaerobic isozyme 4344982..4346322 - 446 1790565 dcuB b4123 R COG2704 anaerobic dicarboxylate transport 4346893..4347612 - 239 1790566 yjdG b4124 T COG2197 putative 2-component transcriptional regulator 4347609..4349240 - 543 1790567 yjdH b4125 T COG3290 putative 2-component sensor protein 4349421..4349651 + 76 1790568 yjdI b4126 S COG3592 orf, hypothetical protein 4349663..4349935 + 90 1790569 yjdJ b4127 R COG2388 orf, hypothetical protein 4350162..4350458 + 98 1790570 yjdK b4128 - - orf, hypothetical protein 4350778..4352295 - 505 1790571 lysU b4129 J COG1190 lysine tRNA synthetase, inducible; heat shock protein 4352532..4353989 - 485 1790572 yjdL b4130 E COG3104 putative peptide transporter 4354048..4356195 - 715 1790573 cadA b4131 E COG1982 lysine decarboxylase 1 4356275..4357609 - 444 1790575 cadB b4132 E COG0531 transport of lysine/cadaverine 4357974..4359512 - 512 1790576 cadC b4133 K COG2771 transcriptional activator of cad operon 4360311..4360910 - 199 1790577 yjdC b4135 K COG1309 orf, hypothetical protein 4360923..4362620 - 565 1790578 dsbD b4136 O COG0526 thiol:disulfide interchange protein; copper tolerance 4362596..4362934 - 112 1790579 cutA b4137 P COG1324 divalent cation tolerance protein; cytochrome c biogenesis 4363050..4364351 - 433 1790580 dcuA b4138 R COG2704 anaerobic dicarboxylate transport 4364469..4365950 - 493 1790581 aspA b4139 E COG1027 aspartate ammonia-lyase (aspartase) 4366341..4366718 + 125 1790583 b4140 b4140 R COG3030 orf, hypothetical protein 4366734..4367990 - 418 1790584 yjeH b4141 E COG0531 putative transport 4368266..4368559 + 97 1790585 mopB b4142 O COG0234 GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity 4368603..4370249 + 548 1790586 mopA b4143 O COG0459 GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein 4370354..4370740 + 128 1790587 yjeI b4144 - - orf, hypothetical protein 4370943..4371812 - 289 1790588 yjeJ b4145 - - orf, hypothetical protein 4372207..4373235 - 342 1790589 yjeK b4146 E COG1509 orf, hypothetical protein 4373277..4373843 + 188 1790590 efp b4147 J COG0231 elongation factor P (EF-P) 4374303..4374770 + 155 1790591 sugE b4148 P COG2076 suppresses groEL, may be chaperone 4374767..4375300 - 177 1790592 blc b4149 M COG3040 outer membrane lipoprotein (lipocalin) 4375389..4376522 - 377 1790593 ampC b4150 M COG1680 beta-lactamase; penicillin resistance 4376585..4376944 - 119 1790594 frdD b4151 C COG3080 fumarate reductase, anaerobic, membrane anchor polypeptide 4376955..4377350 - 131 1790595 frdC b4152 C COG3029 fumarate reductase, anaerobic, membrane anchor polypeptide 4377361..4378095 - 244 1790596 frdB b4153 C COG0479 fumarate reductase, anaerobic, iron-sulfur protein subunit 4378088..4379896 - 602 1790597 frdA b4154 C COG1053 fumarate reductase, anaerobic, flavoprotein subunit 4380191..4381198 + 335 1790599 yjeA b4155 J COG2269 putative lysyl-tRNA synthetase 4381375..4382919 + 514 1790600 yjeM b4156 E COG0531 putative transport 4382971..4383285 + 104 1790601 yjeN b4157 - - orf, hypothetical protein 4383282..4383596 + 104 1790602 yjeO b4158 - - orf, hypothetical protein 4383625..4386948 - 1107 2367355 yjeP b4159 M COG3264 putative periplasmic binding protein 4386970..4387938 - 322 1790604 psd b4160 I COG0688 phosphatidylserine decarboxylase; phospholipid synthesis 4388035..4389048 - 337 1790605 yjeQ b4161 R COG1162 orf, hypothetical protein 4389113..4389727 + 204 1790606 yjeR b4162 F COG1949 orf, hypothetical protein 4390506..4391645 - 379 1790608 yjeS b4166 C COG1600 orf, hypothetical protein 4391644..4393191 + 515 1790609 yjeF b4167 S COG0062 orf, hypothetical protein 4393163..4393624 + 153 1790610 yjeE b4168 R COG0802 orf, hypothetical protein 4393643..4394980 + 445 1790611 amiB b4169 M COG0860 N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase 4394990..4396837 + 615 1790612 mutL b4170 L COG0323 enzyme in methyl-directed mismatch repair 4396830..4397780 + 316 1790613 miaA b4171 J COG0324 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 4397866..4398174 + 102 1790614 hfq b4172 R COG1923 host factor I for bacteriophage Q beta replication, a growth-related protein 4398250..4399530 + 426 1790615 hflX b4173 R COG2262 GTP - binding subunit of protease specific for phage lambda cII repressor 4399616..4400875 + 419 1790616 hflK b4174 O COG0330 protease specific for phage lambda cII repressor 4400878..4401882 + 334 1790617 hflC b4175 O COG0330 protease specific for phage lambda cII repressor 4401964..4402161 + 65 1790619 yjeT b4176 S COG3242 orf, hypothetical protein 4402265..4403563 + 432 1790620 purA b4177 F COG0104 adenylosuccinate synthetase 4403768..4404193 + 141 1790621 yjeB b4178 K COG1959 orf, hypothetical protein 4404190..4406673 + 827 1790622 vacB b4179 K COG0557 putative enzyme 4406853..4407584 + 243 1790623 yjfH b4180 J COG0566 orf, hypothetical protein 4407711..4408112 + 133 1790624 yjfI b4181 - - orf, hypothetical protein 4408131..4408829 + 232 1790625 yjfJ b4182 I COG1842 putative alpha helical protein 4408880..4409539 + 219 1790626 yjfK b4183 - - orf, hypothetical protein 4409557..4409955 + 132 1790627 yjfL b4184 - - orf, hypothetical protein 4409965..4410603 + 212 1790628 yjfM b4185 - - orf, hypothetical protein 4410606..4411769 + 387 1790629 yjfC b4186 E COG0754 putative synthetase/amidase 4411838..4413478 + 546 1790630 aidB b4187 I COG1960 putative acyl coenzyme A dehydrogenase 4413595..4413897 - 100 1790631 yjfN b4188 - - orf, hypothetical protein 4414019..4414447 - 142 1790633 yjfO b4189 - - orf, hypothetical protein 4414530..4415279 + 249 1790634 yjfP b4190 R COG1073 orf, hypothetical protein 4415276..4416031 - 251 1790635 yjfQ b4191 K COG1349 putative DEOR-type transcriptional regulator 4416139..4417209 - 356 1790636 yjfR b4192 R COG2220 orf, hypothetical protein 4417501..4418955 + 484 2367358 sgaT b4193 S COG3037 orf, hypothetical protein 4418971..4419276 + 101 1790638 sgaB b4194 G COG3414 orf, hypothetical protein 4419286..4419750 + 154 2367359 ptxA b4195 G COG1762 putative PTS system enzyme II A component 4419764..4420414 + 216 1790640 sgaH b4196 G COG0269 probable hexulose-6-phosphate synthase 4420424..4421278 + 284 1790641 sgaU b4197 G COG3623 putative hexulose-6-phosphate isomerase 4421278..4421964 + 228 1790642 sgaE b4198 G COG0235 putative epimerase/aldolase 4422094..4422369 - 91 1790643 yjfY b4199 - - orf, hypothetical protein 4422696..4423091 + 131 1790644 rpsF b4200 J COG0360 30S ribosomal subunit protein S6 4423098..4423412 + 104 1790645 priB b4201 L COG2965 primosomal replication protein N 4423417..4423644 + 75 1790646 rpsR b4202 J COG0238 30S ribosomal subunit protein S18 4423686..4424135 + 149 1790647 rplI b4203 J COG0359 50S ribosomal subunit protein L9 4424206..4425000 - 264 1790648 yjfZ b4204 - - orf, hypothetical protein 4425347..4425673 + 108 1790650 ytfA b4205 - - orf, hypothetical protein 4425657..4426331 - 224 1790651 ytfB b4206 M COG3061 orf, hypothetical protein 4426354..4427133 + 259 1790652 fklB b4207 O COG0545 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) 4427442..4428854 + 470 1790653 cycA b4208 E COG1113 transport of D-alanine, D-serine, and glycine 4428899..4429561 - 220 1790654 ytfE b4209 D COG2846 orf, hypothetical protein 4429669..4430643 - 324 1790655 ytfF b4210 G COG0697 putative transmembrane subunit 4430742..4431602 - 286 1790656 ytfG b4211 M COG0702 putative oxidoreductase 4431601..4432071 + 156 1790657 ytfH b4212 K COG1733 orf, hypothetical protein 4432200..4434143 - 647 1790658 cpdB b4213 F COG0737 2':3'-cyclic-nucleotide 2'-phosphodiesterase 4434333..4435073 + 246 1790659 cysQ b4214 P COG1218 affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis 4435285..4435785 + 166 1790661 ytfI b4215 - - orf, hypothetical protein 4436285..4436839 - 184 1790662 ytfJ b4216 R COG3054 orf, hypothetical protein 4437125..4437370 + 81 1790663 ytfK b4217 - - orf, hypothetical protein 4437449..4438792 - 447 1790664 ytfL b4218 R COG1253 putative transport protein 4439115..4439753 - 212 1790665 msrA b4219 O COG0225 peptide methionine sulfoxide reductase 4439959..4441692 + 577 1790666 ytfM b4220 M COG0729 orf, hypothetical protein 4441689..4445468 + 1259 1790667 ytfN b4221 S COG2911 orf, hypothetical protein 4445471..4445812 + 113 1790668 ytfP b4222 S COG2105 orf, hypothetical protein 4445553..4445822 - 89 1790669 yjfA b4223 - - orf, hypothetical protein 4446018..4446275 + 85 1790671 chpS b4224 T COG2336 suppressor of inhibitory function of ChpB, PemI-like, autoregulated 4446269..4446619 + 116 1790672 chpB b4225 T COG2337 probable growth inhibitor, PemK-like, autoregulated 4446699..4447229 - 176 1790673 ppa b4226 C COG0221 inorganic pyrophosphatase 4447539..4448495 + 318 1790674 ytfQ b4227 G COG1879 putative LACI-type transcriptional regulator 4448633..4449886 + 417 1790675 ytfR b4228 G COG1129 putative ATP-binding component of a transport system 4449862..4450134 + 90 1790676 ytfS b4229 G COG1129 putative ATP-binding component of a transport system 4450145..4451170 + 341 1790677 ytfT b4230 G COG1172 putative transport system permease protein 4451181..4452152 + 323 1790678 yjfF b4231 G COG1172 putative transport system permease protein 4452185..4453183 - 332 1790679 fbp b4232 G COG0158 fructose-bisphosphatase 4453359..4454732 + 457 1790680 yjfG b4233 M COG0773 putative ligase 4454888..4455439 - 183 1790681 yjgA b4234 S COG3028 putative alpha helix protein 4455533..4456885 + 450 1790682 pmbA b4235 R COG0312 maturation of antibiotic MccB17, see tld genes 4457127..4457429 + 100 1790684 cybC b4236 - - cytochrome b(562) 4457474..4457938 - 154 1790685 nrdG b4237 O COG0602 anaerobic ribonucleotide reductase activating protein 4458096..4460234 - 712 1790686 nrdD b4238 F COG1328 anaerobic ribonucleoside-triphosphate reductase 4460628..4462283 - 551 1790687 treC b4239 G COG0366 trehalase 6-P hydrolase 4462333..4463754 - 473 2367362 treB b4240 G COG1263 PTS system enzyme II, trehalose specific 4463873..4464820 - 315 1790689 treR b4241 K COG1609 repressor of treA,B,C 4465199..4467895 + 898 2367363 mgtA b4242 P COG0474 Mg2+ transport ATPase, P-type 1 4468101..4468526 - 141 1790691 yjgF b4243 J COG0251 orf, hypothetical protein 4468560..4469021 - 153 1790692 pyrI b4244 F COG1781 aspartate carbamoyltransferase, regulatory subunit 4469034..4469969 - 311 2367364 pyrB b4245 F COG0540 aspartate carbamoyltransferase, catalytic subunit 4469973..4470107 - 44 1790694 pyrL b4246 - - pyrBI operon leader peptide 4470087..4470419 + 110 1790695 yjgG b4247 - - orf, hypothetical protein 4470388..4470783 - 131 1790696 yjgH b4248 J COG0251 orf, hypothetical protein 4470914..4471627 - 237 2367365 yjgI b4249 Q COG1028 putative oxidoreductase 4471801..4471965 + 54 1790699 b4250 b4250 - - orf, hypothetical protein 4472037..4472291 + 84 1790700 yjgJ b4251 - - orf, hypothetical protein 4472427..4472888 + 153 1790701 yjgK b4252 S COG2731 orf, hypothetical protein 4472975..4474825 + 616 1790702 yjgL b4253 - - orf, hypothetical protein 4474870..4475874 - 334 1790703 argI b4254 E COG0078 ornithine carbamoyltransferase 1 4476036..4476452 + 138 1790704 yjgD b4255 S COG3076 orf, hypothetical protein 4476597..4476890 - 97 1790705 b4256 b4256 K COG0454 orf, hypothetical protein 4477310..4478491 + 393 2367367 yjgN b4257 - - orf, hypothetical protein 4478550..4481405 - 951 1790708 valS b4258 J COG0525 valine tRNA synthetase 4481405..4481848 - 147 1790709 holC b4259 L COG2927 DNA polymerase III, chi subunit 4482008..4483519 - 503 1790710 pepA b4260 E COG0260 aminopeptidase A/I 4483786..4484886 + 366 1790712 yjgP b4261 R COG0795 orf, hypothetical protein 4484883..4485968 + 361 1790713 yjgQ b4262 R COG0795 orf, hypothetical protein 4486129..4487631 - 500 1790714 yjgR b4263 R COG0433 orf, hypothetical protein 4487709..4488707 - 332 1790715 idnR b4264 K COG1609 L-idonate transcriptional regulator 4488774..4490093 - 439 1790716 idnT b4265 G COG2610 L-idonate transporter 4490155..4490919 - 254 1790717 idnO b4266 Q COG1028 5-keto-D-gluconate 5-reductase 4490943..4491974 - 343 1790718 idnD b4267 E COG1063 L-idonate dehydrogenase 4492191..4492754 + 187 1790719 idnK b4268 P COG3265 gluconate kinase, thermosensitive glucokinase 4492758..4493819 - 353 1790720 yjgB b4269 R COG1064 putative oxidoreductase 4494318..4495508 + 396 1790722 intB b4271 L COG0582 prophage P4 integrase 4495795..4496205 + 136 1790723 yi21_6 b4272 L COG2963 IS2 hypothetical protein 4496163..4497068 + 301 1790724 yi22_6 b4273 L COG2801 IS2 hypothetical protein 4497167..4497502 + 111 1790725 yjgW b4274 - - orf, hypothetical protein 4497611..4498057 - 148 1790726 yjgX b4275 R COG2194 orf, hypothetical protein 4498000..4498449 - 149 1790727 yjgY b4276 - - orf, hypothetical protein 4498828..4499157 + 109 1790728 yjgZ b4277 - - orf, hypothetical protein 4499671..4500999 - 442 1790729 yi41 b4278 L COG3385 IS4 hypothetical protein 4501566..4502843 + 425 1790730 yjhB b4279 G COG0477 putative transport protein 4502840..4503973 + 377 1790731 yjhC b4280 R COG0673 putative dehydrogenase 4504194..4504568 - 124 1790733 yjhD b4281 - - orf, hypothetical protein 4504474..4504677 + 67 1790734 yjhE b4282 - - orf, hypothetical protein 4504729..4505031 + 100 1790735 yi91b b4283 L COG2963 IS911 hypothetical protein (IS911B) 4505034..4506185 - 383 1790736 tra8_3 b4284 L COG2826 IS30 transposase 4506526..4507122 + 198 1790737 b4285 b4285 L COG2801 putative transposase 4507288..4507701 + 137 1790738 b4286 b4286 - - orf, hypothetical protein 4508258..4509025 - 255 1790739 fecE b4287 P COG1120 ATP-binding component of citrate-dependent iron(III) transport protein 4509026..4509982 - 318 1790740 fecD b4288 P COG0609 citrate-dependent iron transport, membrane-bound protein 4509979..4510977 - 332 1790741 fecC b4289 P COG0609 citrate-dependent iron(III) transport protein, cytosolic 4510974..4511882 - 302 1790742 fecB b4290 P COG0614 citrate-dependent iron transport, periplasmic protein 4511921..4514245 - 774 1790743 fecA b4291 P COG1629 outer membrane receptor; citrate-dependent iron transport, outer membrane receptor 4514332..4515285 - 317 1790745 fecR b4292 - - regulator for fec operon, periplasmic 4515282..4515803 - 173 1790746 fecI b4293 K COG1595 probable RNA polymerase sigma factor 4516095..4516370 + 91 1790747 insA_7 b4294 - - IS1 protein InsA 4516906..4517706 - 266 1790748 yjhU b4295 K COG2390 orf, hypothetical protein 4518239..4519588 - 449 2367370 yjhF b4296 - - putative transport system permease 4519695..4521662 - 655 2367371 yjhG b4297 E COG0129 putative dehydratase 4521673..4522632 - 319 1790751 yjhH b4298 E COG0329 putative lyase/synthase 4522583..4523371 - 262 1790752 yjhI b4299 K COG1414 putative regulator 4523674..4524456 - 260 1790753 sgcR b4300 K COG1349 putative DEOR-type transcriptional regulator 4524473..4525105 - 210 1790754 sgcE b4301 G COG0036 putative epimerase 4525117..4525548 - 143 1790755 sgcA b4302 G COG1762 putative PTS system enzyme II A component 4525679..4526485 - 268 1790757 sgcQ b4303 R COG0434 putative nucleoside triphosphatase 4526498..4527811 - 437 1790758 sgcC b4304 - - putative PTS system enzyme IIC component 4528098..4529249 - 383 2367373 sgcX b4305 G COG1363 putative lyase/synthase 4530005..4530751 - 248 1790760 yjhP b4306 Q COG0500 putative methyltransferase 4530807..4531352 - 181 1790761 yjhQ b4307 R COG3153 orf, hypothetical protein 4532583..4533599 + 338 1790762 yjhR b4308 L COG1112 putative frameshift suppressor 4534182..4535162 - 326 1790763 yjhS b4309 - - orf, hypothetical protein 4535227..4536441 - 404 1790764 yjhT b4310 S COG3055 orf, hypothetical protein 4536353..4537078 - 241 1790765 yjhA b4311 - - orf, hypothetical protein 4538525..4539127 + 200 1790767 fimB b4312 L COG0582 recombinase involved in phase variation; regulator for fimA 4539605..4540201 + 198 1790768 fimE b4313 L COG0582 recombinase involved in phase variation; regulator for fimA 4540683..4541231 + 182 1790769 fimA b4314 N COG3539 major type 1 subunit fimbrin (pilin) 4541188..4541835 + 215 1790770 fimI b4315 N COG3539 fimbrial protein 4541872..4542597 + 241 1790771 fimC b4316 N COG3121 periplasmic chaperone, required for type 1 fimbriae 4542665..4545301 + 878 1790772 fimD b4317 - - outer membrane protein; export and assembly of type 1 fimbriae, interrupted 4545311..4545841 + 176 1790773 fimF b4318 N COG3539 fimbrial morphology 4545854..4546357 + 167 1790774 fimG b4319 N COG3539 fimbrial morphology 4546377..4547279 + 300 1790775 fimH b4320 - - minor fimbrial subunit, D-mannose specific adhesin 4547522..4548865 - 447 1790776 gntP b4321 G COG2610 gluconate transport system permease 3 4549205..4550389 + 394 1790778 uxuA b4322 G COG1312 mannonate hydrolase 4550470..4551930 + 486 1790779 uxuB b4323 G COG0246 D-mannonate oxidoreductase 4552145..4552918 + 257 1790780 uxuR b4324 K COG2186 regulator for uxu operon 4553059..4553889 - 276 1790781 yjiC b4325 - - orf, hypothetical protein 4554553..4554954 + 133 1790782 yjiD b4326 - - orf, hypothetical protein 4554947..4555858 - 303 1790783 yjiE b4327 K COG0583 putative transcriptional regulator LYSR-type 4555923..4557095 - 390 1790784 iadA b4328 - - isoaspartyl dipeptidase 4557108..4557569 - 153 1790785 yjiG b4329 S COG0700 orf, hypothetical protein 4557566..4558261 - 231 1790786 yjiH b4330 S COG3314 orf, hypothetical protein 4558397..4559053 + 218 1790787 yjiI b4331 S COG1859 orf, hypothetical protein 4559066..4560244 - 392 1790788 yjiJ b4332 G COG0477 putative transport protein 4560312..4561283 - 323 1790790 yjiK b4333 S COG3204 orf, hypothetical protein 4561491..4562264 - 257 1790791 yjiL b4334 I COG1924 putative enzyme 4562268..4563440 - 390 1790792 yjiM b4335 E COG1775 orf, hypothetical protein 4563535..4564815 - 426 1790793 yjiN b4336 S COG2733 orf, hypothetical protein 4564856..4566088 - 410 1790794 yjiO b4337 G COG0477 putative transport protein 4566567..4566878 + 103 1790795 yjiP b4338 - - orf, hypothetical protein 4566927..4567487 + 186 1790796 yjiQ b4339 - - orf, hypothetical protein 4567731..4569143 - 470 1790797 yjiR b4340 K COG1167 putative regulator 4569320..4569484 + 54 1790798 yjiS b4341 - - orf, hypothetical protein 4569935..4571500 + 521 1790799 yjiT b4342 - - orf, hypothetical protein 4571704..4573245 + 513 2367376 yjiU b4343 - - orf, hypothetical protein 4573163..4574425 + 420 1790803 mcrD b4344 - - inhibits McrE 5-methylcytosine restriction system 4574482..4575528 - 348 1790804 mcrC b4345 - - component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted 4575528..4576925 - 465 1790805 mcrB b4346 L COG1401 component of McrBC 5-methylcytosine restriction system 4577069..4577467 - 132 1790806 yjiW b4347 - - orf, hypothetical protein 4577638..4579032 - 464 1790807 hsdS b4348 L COG0732 specificity determinant for hsdM and hsdR 4579029..4580618 - 529 1790808 hsdM b4349 L COG0286 host modification; DNA methylase M 4580819..4584385 - 1188 1790809 hsdR b4350 L COG0610 host restriction; endonuclease R 4584519..4585433 + 304 1790811 mrr b4351 L COG1715 restriction of methylated adenine 4585479..4586333 - 284 1790812 yjiA b4352 R COG0523 orf, hypothetical protein 4586446..4586649 - 67 1790813 yjiX b4353 S COG2879 orf, hypothetical protein 4586699..4588864 - 721 1790814 yjiY b4354 T COG1966 putative carbon starvation protein 4589227..4590882 + 551 2367378 tsr b4355 N COG0840 methyl-accepting chemotaxis protein I, serine sensor receptor 4590931..4592292 - 453 2367379 yjiZ b4356 G COG0477 putative transport protein, cryptic, orf, joins former yjiZ and yjjL 4592507..4593313 - 268 1790818 yjjM b4357 K COG1802 orf, hypothetical protein 4593544..4594581 + 345 1790819 yjjN b4358 E COG1063 putative oxidoreductase 4594719..4596971 - 750 1790821 mdoB b4359 M COG1368 phosphoglycerol transferase I 4597264..4597761 - 165 1790822 yjjA b4360 - - putative glycoprotein/receptor 4597807..4598544 - 245 1790823 dnaC b4361 L COG1484 chromosome replication; initiation and chain elongation 4598547..4599086 - 179 1790824 dnaT b4362 - - DNA biosynthesis; primosomal protein i 4599193..4599519 - 108 1790825 yjjB b4363 S COG3610 orf, hypothetical protein 4599657..4600490 - 277 1790826 yjjP b4364 S COG2966 putative structural protein 4601046..4601771 + 241 1790827 yjjQ b4365 T COG2197 putative regulator 4601729..4602406 + 225 1790828 bglJ b4366 T COG2197 2-component transcriptional regulator 4602444..4603232 - 262 1790829 fhuF b4367 - - orf, hypothetical protein 4604238..4605269 - 343 1790830 yjjT b4371 J COG2813 putative enzyme 4605372..4605785 + 137 1790831 holD b4372 L COG3050 DNA polymerase III, psi subunit 4605754..4606200 + 148 2367381 rimI b4373 R COG0456 acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine 4606215..4606892 + 225 1790833 yjjG b4374 R COG1011 putative phosphatase 4606983..4608572 + 529 1790835 prfC b4375 J COG0480 peptide chain release factor RF-3 4608965..4609570 + 201 1790836 osmY b4376 R COG2823 hyperosmotically inducible periplasmic protein 4609980..4611053 + 357 1790837 yjjU b4377 R COG1752 orf, hypothetical protein 4611194..4611829 + 211 1790838 yjjV b4378 - - orf, hypothetical protein 4612249..4613112 - 287 1790839 yjjW b4379 O COG1180 putative activating enzyme 4613084..4614634 - 516 1790840 yjjI b4380 - - orf, hypothetical protein 4614892..4615671 + 259 1790841 deoC b4381 F COG0274 2-deoxyribose-5-phosphate aldolase 4615798..4617120 + 440 1790842 deoA b4382 F COG0213 thymidine phosphorylase 4617172..4618395 + 407 1790843 deoB b4383 G COG1015 phosphopentomutase 4618452..4619171 + 239 1790844 deoD b4384 F COG0813 purine-nucleoside phosphorylase 4619338..4620669 + 443 1790845 yjjJ b4385 - - orf, hypothetical protein 4620670..4621686 - 338 1790846 lplA b4386 H COG0095 lipoate-protein ligase A 4621714..4622358 - 214 1790847 smp b4387 - - orf, hypothetical protein 4622464..4623432 + 322 1790849 serB b4388 E COG0560 3-phosphoserine phosphatase 4623481..4624863 + 460 1790850 sms b4389 O COG1066 probable ATP-dependent protease 4624863..4626116 + 417 1790851 nadR b4390 H COG1056 probable nadAB transcriptional regulator 4626424..4628091 - 555 2367384 yjjK b4391 R COG0488 putative ATP-binding component of a transport system 4628275..4630239 + 654 1790853 slt b4392 M COG0741 soluble lytic murein transglycosylase 4630329..4630655 + 108 1790854 trpR b4393 K COG2973 regulator for trp operon and aroH; trp aporepressor 4630802..4631323 - 173 1790855 yjjX b4394 S COG1986 orf, hypothetical protein 4631366..4632013 + 215 1790856 gpmB b4395 G COG0406 phosphoglyceromutase 2 4632010..4632879 - 289 1790857 rob b4396 K COG2207 right origin-binding protein 4633090..4633563 + 157 1790859 creA b4397 S COG3045 orf, hypothetical protein 4633576..4634265 + 229 1790860 creB b4398 T COG0745 catabolic regulation response regulator 4634265..4635689 + 474 1790861 creC b4399 T COG0642 catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon 4635747..4637099 + 450 1790862 creD b4400 - - tolerance to colicin E2 4637159..4637875 - 238 1790863 arcA b4401 T COG0745 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) 4637971..4638111 + 46 1790864 yjjY b4402 - - orf, hypothetical protein 4638511..4639197 + 228 1790865 lasT b4403 J COG0565 orf, hypothetical protein